RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 SALL2Q9Y467 1007 aaPredicted RBP8.8□□□□□ -1
USP47-206ENST00000525367 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
USP47-206ENST00000525367 JUNDP17535 347 aa8.79□□□□□ -1
USP47-206ENST00000525367 RANGAP1P46060 587 aaPredicted RBP8.79□□□□□ -1
USP47-206ENST00000525367 ZNF787Q6DD87 383 aa8.79□□□□□ -1
USP47-206ENST00000525367 WWC1Q8IX03 1113 aa8.79□□□□□ -1
USP47-206ENST00000525367 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
USP47-206ENST00000525367 SPSB2Q99619 263 aa8.78□□□□□ -1
USP47-206ENST00000525367 SERPINA10Q9UK55 444 aa8.78□□□□□ -1
USP47-206ENST00000525367 HDGFL1Q5TGJ6 251 aa8.77□□□□□ -1.01
USP47-206ENST00000525367 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
USP47-206ENST00000525367 ZNF775Q96BV0 537 aaPredicted RBP8.77□□□□□ -1.01
USP47-206ENST00000525367 MTRQ99707 1265 aa8.77□□□□□ -1.01
USP47-206ENST00000525367 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
USP47-206ENST00000525367 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
USP47-206ENST00000525367 PTPRNQ16849 979 aa8.75□□□□□ -1.01
USP47-206ENST00000525367 MSS51Q4VC12 460 aa8.75□□□□□ -1.01
USP47-206ENST00000525367 PODXL2Q9NZ53 605 aa8.75□□□□□ -1.01
USP47-206ENST00000525367 ZPR1O75312 459 aa8.74□□□□□ -1.01
USP47-206ENST00000525367 CTHP32929 405 aa8.74□□□□□ -1.01
USP47-206ENST00000525367 WASHC4Q2M389 1173 aa8.74□□□□□ -1.01
USP47-206ENST00000525367 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.74□□□□□ -1.01
USP47-206ENST00000525367 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
USP47-206ENST00000525367 ALG2Q9H553 416 aa8.73□□□□□ -1.01
USP47-206ENST00000525367 PDZRN3Q9UPQ7 1066 aa8.73□□□□□ -1.01
USP47-206ENST00000525367 FBXO45P0C2W1 286 aa8.72□□□□□ -1.01
USP47-206ENST00000525367 MMP16P51512 607 aa8.72□□□□□ -1.01
USP47-206ENST00000525367 NKX2-3Q8TAU0 364 aa8.72□□□□□ -1.01
USP47-206ENST00000525367 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
USP47-206ENST00000525367 FKBPLQ9UIM3 349 aa8.72□□□□□ -1.01
USP47-206ENST00000525367 ADH1BP00325 375 aa8.71□□□□□ -1.02
USP47-206ENST00000525367 CCNYL3P0C7X3 344 aa8.71□□□□□ -1.02
USP47-206ENST00000525367 RFX1P22670 979 aa8.69□□□□□ -1.02
USP47-206ENST00000525367 KCNH2Q12809 1159 aa8.69□□□□□ -1.02
USP47-206ENST00000525367 CFAP70Q5T0N1 1121 aa8.69□□□□□ -1.02
USP47-206ENST00000525367 PTCRAQ6ISU1 281 aaPredicted RBP8.69□□□□□ -1.02
USP47-206ENST00000525367 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
USP47-206ENST00000525367 EVA1BQ9NVM1 165 aa8.69□□□□□ -1.02
USP47-206ENST00000525367 NR1H3Q13133 447 aa8.68□□□□□ -1.02
USP47-206ENST00000525367 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
USP47-206ENST00000525367 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.67□□□□□ -1.02
USP47-206ENST00000525367 ZBBXA8MT70 800 aa8.67□□□□□ -1.02
USP47-206ENST00000525367 S1PR4O95977 384 aa8.67□□□□□ -1.02
USP47-206ENST00000525367 PPP1R12CQ9BZL4 782 aa8.67□□□□□ -1.02
USP47-206ENST00000525367 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
USP47-206ENST00000525367 PIK3CDO00329 1044 aa8.66□□□□□ -1.02
USP47-206ENST00000525367 PALM3A6NDB9 673 aaPredicted RBP8.65□□□□□ -1.02
USP47-206ENST00000525367 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
USP47-206ENST00000525367 TBC1D9Q6ZT07 1266 aa8.65□□□□□ -1.02
USP47-206ENST00000525367 TRIM67Q6ZTA4 783 aa8.65□□□□□ -1.02
USP47-206ENST00000525367 RETREG2Q8NC44 543 aa8.65□□□□□ -1.02
USP47-206ENST00000525367 PNMA1Q8ND90 353 aa8.65□□□□□ -1.02
USP47-206ENST00000525367 UNC93B1Q9H1C4 597 aa8.65□□□□□ -1.02
USP47-206ENST00000525367 TFIP11Q9UBB9 837 aaKnown RBP8.64□□□□□ -1.03
USP47-206ENST00000525367 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
USP47-206ENST00000525367 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
USP47-206ENST00000525367 EIF4G2P78344 907 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP47-206ENST00000525367 TRIM26Q12899 539 aaPredicted RBP8.63□□□□□ -1.03
USP47-206ENST00000525367 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
USP47-206ENST00000525367 LMOD1P29536 600 aaPredicted RBP8.62□□□□□ -1.03
USP47-206ENST00000525367 SOX11P35716 441 aa8.62□□□□□ -1.03
USP47-206ENST00000525367 GGCXP38435 758 aa8.62□□□□□ -1.03
USP47-206ENST00000525367 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
USP47-206ENST00000525367 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
USP47-206ENST00000525367 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
USP47-206ENST00000525367 FAM174AQ8TBP5 190 aa8.61□□□□□ -1.03
USP47-206ENST00000525367 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
USP47-206ENST00000525367 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
USP47-206ENST00000525367 MYT1Q01538 1121 aa8.6□□□□□ -1.03
USP47-206ENST00000525367 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
USP47-206ENST00000525367 BAP1Q92560 729 aa8.6□□□□□ -1.03
USP47-206ENST00000525367 PBXIP1Q96AQ6 731 aa8.6□□□□□ -1.03
USP47-206ENST00000525367 CARD14Q9BXL6 1004 aa8.6□□□□□ -1.03
USP47-206ENST00000525367 PDIA4P13667 645 aaKnown RBP8.59□□□□□ -1.03
USP47-206ENST00000525367 PTK2Q05397 1052 aa8.59□□□□□ -1.03
USP47-206ENST00000525367 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
USP47-206ENST00000525367 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
USP47-206ENST00000525367 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
USP47-206ENST00000525367 ADAM32Q8TC27 787 aa8.59□□□□□ -1.03
USP47-206ENST00000525367 FOXJ1Q92949 421 aa8.59□□□□□ -1.03
USP47-206ENST00000525367 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
USP47-206ENST00000525367 PCDHB9Q9Y5E1 797 aa8.59□□□□□ -1.03
USP47-206ENST00000525367 POTECB2RU33 542 aa8.58□□□□□ -1.04
USP47-206ENST00000525367 DGAT1O75907 488 aa8.58□□□□□ -1.04
USP47-206ENST00000525367 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
USP47-206ENST00000525367 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
USP47-206ENST00000525367 ARMC2Q8NEN0 867 aa8.58□□□□□ -1.04
USP47-206ENST00000525367 ARHGAP9Q9BRR9 750 aa8.58□□□□□ -1.04
USP47-206ENST00000525367 MAGEB6P1A0A0J9YX57 407 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 ATP9BO43861 1147 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 PRR20EP86478 221 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 PRR20CP86479 221 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 PRR20DP86480 221 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 PRR20BP86481 221 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 PRR20AP86496 221 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 DEPDC4Q8N2C3 294 aa8.57□□□□□ -1.04
USP47-206ENST00000525367 GPKOWQ92917 476 aaPredicted RBP eCLIP8.57□□□□□ -1.04
USP47-206ENST00000525367 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
USP47-206ENST00000525367 SH3RF1Q7Z6J0 888 aa8.56□□□□□ -1.04
USP47-206ENST00000525367 GPSM3Q9Y4H4 160 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms