RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 NUCB1Q02818 461 aa11.98□□□□□ -0.49
KDM2A-204ENST00000524657 KDM5DQ9BY66 1539 aa11.97□□□□□ -0.49
KDM2A-204ENST00000524657 LRSAM1Q6UWE0 723 aa11.97□□□□□ -0.49
KDM2A-204ENST00000524657 USP25Q9UHP3 1055 aa11.97□□□□□ -0.49
KDM2A-204ENST00000524657 KIF3AQ9Y496 699 aa11.97□□□□□ -0.49
KDM2A-204ENST00000524657 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
KDM2A-204ENST00000524657 ELL2O00472 640 aaPredicted RBP11.97□□□□□ -0.49
KDM2A-204ENST00000524657 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
KDM2A-204ENST00000524657 ASXL1Q8IXJ9 1541 aa11.97□□□□□ -0.49
KDM2A-204ENST00000524657 PDCL2Q8N4E4 241 aa11.97□□□□□ -0.49
KDM2A-204ENST00000524657 TROQ12816 1431 aaPredicted RBP11.96□□□□□ -0.49
KDM2A-204ENST00000524657 NOLC1Q14978 699 aaKnown RBP eCLIP11.96□□□□□ -0.5
KDM2A-204ENST00000524657 WDR63Q8IWG1 891 aa11.96□□□□□ -0.5
KDM2A-204ENST00000524657 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
KDM2A-204ENST00000524657 BMP2KLQ5H9B9 411 aa11.95□□□□□ -0.5
KDM2A-204ENST00000524657 NGEFQ8N5V2 710 aa11.95□□□□□ -0.5
KDM2A-204ENST00000524657 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
KDM2A-204ENST00000524657 FAM135AQ9P2D6 1515 aa11.95□□□□□ -0.5
KDM2A-204ENST00000524657 MCM5P33992 734 aa11.95□□□□□ -0.5
KDM2A-204ENST00000524657 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
KDM2A-204ENST00000524657 ZBTB40Q9NUA8 1239 aa11.95□□□□□ -0.5
KDM2A-204ENST00000524657 TRPM1Q7Z4N2 1603 aa11.94□□□□□ -0.5
KDM2A-204ENST00000524657 GTPBP4Q9BZE4 634 aaKnown RBP11.94□□□□□ -0.5
KDM2A-204ENST00000524657 TSPY26PQ9H489 355 aa11.94□□□□□ -0.5
KDM2A-204ENST00000524657 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
KDM2A-204ENST00000524657 CFAP70Q5T0N1 1121 aa11.93□□□□□ -0.5
KDM2A-204ENST00000524657 IBTKQ9P2D0 1353 aaPredicted RBP11.93□□□□□ -0.5
KDM2A-204ENST00000524657 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
KDM2A-204ENST00000524657 IQGAP2Q13576 1575 aa11.93□□□□□ -0.5
KDM2A-204ENST00000524657 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
KDM2A-204ENST00000524657 KIF20AO95235 890 aa11.93□□□□□ -0.5
KDM2A-204ENST00000524657 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
KDM2A-204ENST00000524657 CDC45O75419 566 aa11.92□□□□□ -0.5
KDM2A-204ENST00000524657 SPC24Q8NBT2 197 aa11.92□□□□□ -0.5
KDM2A-204ENST00000524657 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
KDM2A-204ENST00000524657 PLB1Q6P1J6 1458 aa11.92□□□□□ -0.5
KDM2A-204ENST00000524657 HMGN5P82970 282 aaKnown RBP11.92□□□□□ -0.5
KDM2A-204ENST00000524657 RABEP1Q15276 862 aa11.92□□□□□ -0.5
KDM2A-204ENST00000524657 C16orf71Q8IYS4 520 aaPredicted RBP11.92□□□□□ -0.5
KDM2A-204ENST00000524657 ZDHHC9Q9Y397 364 aa11.92□□□□□ -0.5
KDM2A-204ENST00000524657 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
KDM2A-204ENST00000524657 TRERF1Q96PN7 1200 aa11.91□□□□□ -0.5
KDM2A-204ENST00000524657 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
KDM2A-204ENST00000524657 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
KDM2A-204ENST00000524657 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
KDM2A-204ENST00000524657 PRDM15P57071 1507 aaPredicted RBP11.9□□□□□ -0.5
KDM2A-204ENST00000524657 ADCY5O95622 1261 aa11.9□□□□□ -0.5
KDM2A-204ENST00000524657 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
KDM2A-204ENST00000524657 CLASP1Q7Z460 1538 aa11.9□□□□□ -0.5
KDM2A-204ENST00000524657 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.5
KDM2A-204ENST00000524657 ST18O60284 1047 aa11.9□□□□□ -0.5
KDM2A-204ENST00000524657 DTNBO60941 627 aa11.9□□□□□ -0.51
KDM2A-204ENST00000524657 KCNJ4P48050 445 aa11.9□□□□□ -0.51
KDM2A-204ENST00000524657 CHAF1AQ13111 956 aaPredicted RBP11.9□□□□□ -0.51
KDM2A-204ENST00000524657 PRIMPOLQ96LW4 560 aa11.9□□□□□ -0.51
KDM2A-204ENST00000524657 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.51
KDM2A-204ENST00000524657 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
KDM2A-204ENST00000524657 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
KDM2A-204ENST00000524657 GADD45BO75293 160 aaPredicted RBP11.89□□□□□ -0.51
KDM2A-204ENST00000524657 CLEC17AQ6ZS10 378 aa11.89□□□□□ -0.51
KDM2A-204ENST00000524657 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
KDM2A-204ENST00000524657 ERICH4A6NGS2 130 aa11.89□□□□□ -0.51
KDM2A-204ENST00000524657 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
KDM2A-204ENST00000524657 PDIA4P13667 645 aaKnown RBP11.89□□□□□ -0.51
KDM2A-204ENST00000524657 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
KDM2A-204ENST00000524657 GSPT1P15170 499 aaKnown RBP11.88□□□□□ -0.51
KDM2A-204ENST00000524657 NEK4P51957 841 aa11.88□□□□□ -0.51
KDM2A-204ENST00000524657 TRAK1Q9UPV9 953 aa11.88□□□□□ -0.51
KDM2A-204ENST00000524657 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
KDM2A-204ENST00000524657 ATAD2Q6PL18 1390 aa11.87□□□□□ -0.51
KDM2A-204ENST00000524657 NAA30Q147X3 362 aaPredicted RBP11.87□□□□□ -0.51
KDM2A-204ENST00000524657 CYP2E1P05181 493 aaPredicted RBP11.87□□□□□ -0.51
KDM2A-204ENST00000524657 SAFB2Q14151 953 aaKnown RBP eCLIP11.87□□□□□ -0.51
KDM2A-204ENST00000524657 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
KDM2A-204ENST00000524657 MBD3O95983 291 aa11.86□□□□□ -0.51
KDM2A-204ENST00000524657 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
KDM2A-204ENST00000524657 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
KDM2A-204ENST00000524657 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
KDM2A-204ENST00000524657 USP26Q9BXU7 913 aa11.86□□□□□ -0.51
KDM2A-204ENST00000524657 CWC22Q9HCG8 908 aaKnown RBP11.86□□□□□ -0.51
KDM2A-204ENST00000524657 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
KDM2A-204ENST00000524657 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
KDM2A-204ENST00000524657 PHF23Q9BUL5 403 aaPredicted RBP11.85□□□□□ -0.51
KDM2A-204ENST00000524657 PYCARDQ9ULZ3 195 aa11.85□□□□□ -0.51
KDM2A-204ENST00000524657 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
KDM2A-204ENST00000524657 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
KDM2A-204ENST00000524657 PTPRGP23470 1445 aa11.84□□□□□ -0.51
KDM2A-204ENST00000524657 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
KDM2A-204ENST00000524657 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
KDM2A-204ENST00000524657 NPHP1O15259 732 aa11.83□□□□□ -0.52
KDM2A-204ENST00000524657 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
KDM2A-204ENST00000524657 TMX3Q96JJ7 454 aa11.83□□□□□ -0.52
KDM2A-204ENST00000524657 C16orf45Q96MC5 204 aaPredicted RBP11.83□□□□□ -0.52
KDM2A-204ENST00000524657 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
KDM2A-204ENST00000524657 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.52
KDM2A-204ENST00000524657 SCAPERQ9BY12 1400 aa11.83□□□□□ -0.52
KDM2A-204ENST00000524657 INTS3Q68E01 1043 aaKnown RBP11.83□□□□□ -0.52
KDM2A-204ENST00000524657 USP48Q86UV5 1035 aa11.83□□□□□ -0.52
KDM2A-204ENST00000524657 CERS3Q8IU89 383 aa11.83□□□□□ -0.52
KDM2A-204ENST00000524657 UPF3BQ9BZI7 483 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms