RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 NRXN1Q9ULB1 1477 aa11.47□□□□□ -0.57
NECTIN1-204ENST00000524429 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
NECTIN1-204ENST00000524429 CEP170BQ9Y4F5 1589 aaPredicted RBP11.46□□□□□ -0.57
NECTIN1-204ENST00000524429 ZFYVE9O95405 1425 aa11.46□□□□□ -0.57
NECTIN1-204ENST00000524429 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
NECTIN1-204ENST00000524429 A2ML1A8K2U0 1454 aa11.45□□□□□ -0.58
NECTIN1-204ENST00000524429 RPGRIP1LQ68CZ1 1315 aa11.45□□□□□ -0.58
NECTIN1-204ENST00000524429 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
NECTIN1-204ENST00000524429 L3MBTL2Q969R5 705 aa11.45□□□□□ -0.58
NECTIN1-204ENST00000524429 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
NECTIN1-204ENST00000524429 PRAG1Q86YV5 1406 aa11.44□□□□□ -0.58
NECTIN1-204ENST00000524429 TOM1O60784 492 aa11.44□□□□□ -0.58
NECTIN1-204ENST00000524429 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
NECTIN1-204ENST00000524429 SLIT1O75093 1534 aa11.44□□□□□ -0.58
NECTIN1-204ENST00000524429 IDI1Q13907 227 aa11.43□□□□□ -0.58
NECTIN1-204ENST00000524429 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
NECTIN1-204ENST00000524429 POLR1AO95602 1720 aaPredicted RBP11.43□□□□□ -0.58
NECTIN1-204ENST00000524429 SETBP1Q9Y6X0 1596 aa11.42□□□□□ -0.58
NECTIN1-204ENST00000524429 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
NECTIN1-204ENST00000524429 IQGAP1P46940 1657 aa11.41□□□□□ -0.58
NECTIN1-204ENST00000524429 ARHGAP23Q9P227 1491 aa11.41□□□□□ -0.58
NECTIN1-204ENST00000524429 PIK3C2GO75747 1445 aa11.41□□□□□ -0.58
NECTIN1-204ENST00000524429 HOXB3P14651 431 aaPredicted RBP11.4□□□□□ -0.58
NECTIN1-204ENST00000524429 ZNF710Q8N1W2 664 aa11.4□□□□□ -0.58
NECTIN1-204ENST00000524429 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
NECTIN1-204ENST00000524429 GPRASP1Q5JY77 1395 aa11.39□□□□□ -0.59
NECTIN1-204ENST00000524429 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
NECTIN1-204ENST00000524429 RYDENQ9NUL5 291 aaKnown RBP11.38□□□□□ -0.59
NECTIN1-204ENST00000524429 RGS17Q9UGC6 210 aaPredicted RBP11.38□□□□□ -0.59
NECTIN1-204ENST00000524429 CPS1P31327 1500 aa11.38□□□□□ -0.59
NECTIN1-204ENST00000524429 RGL3Q3MIN7 710 aa11.37□□□□□ -0.59
NECTIN1-204ENST00000524429 ALKQ9UM73 1620 aa11.37□□□□□ -0.59
NECTIN1-204ENST00000524429 TMEM2Q9UHN6 1383 aa11.37□□□□□ -0.59
NECTIN1-204ENST00000524429 DIP2AQ14689 1571 aa11.37□□□□□ -0.59
NECTIN1-204ENST00000524429 ERBB3P21860 1342 aa11.36□□□□□ -0.59
NECTIN1-204ENST00000524429 RIMS2Q9UQ26 1411 aa11.36□□□□□ -0.59
NECTIN1-204ENST00000524429 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-204ENST00000524429 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-204ENST00000524429 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-204ENST00000524429 KNDC1Q76NI1 1749 aa11.35□□□□□ -0.59
NECTIN1-204ENST00000524429 ADGRB1O14514 1584 aa11.35□□□□□ -0.59
NECTIN1-204ENST00000524429 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
NECTIN1-204ENST00000524429 HDGFP51858 240 aaKnown RBP11.34□□□□□ -0.59
NECTIN1-204ENST00000524429 NBPF8Q3BBV2 869 aa11.34□□□□□ -0.59
NECTIN1-204ENST00000524429 ZNF326Q5BKZ1 582 aaKnown RBP11.34□□□□□ -0.59
NECTIN1-204ENST00000524429 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.34□□□□□ -0.59
NECTIN1-204ENST00000524429 ARHGEF28Q8N1W1 1705 aaKnown RBP11.34□□□□□ -0.59
NECTIN1-204ENST00000524429 SCAF11Q99590 1463 aaKnown RBP11.33□□□□□ -0.6
NECTIN1-204ENST00000524429 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
NECTIN1-204ENST00000524429 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
NECTIN1-204ENST00000524429 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
NECTIN1-204ENST00000524429 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
NECTIN1-204ENST00000524429 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
NECTIN1-204ENST00000524429 PLEKHG1Q9ULL1 1385 aa11.31□□□□□ -0.6
NECTIN1-204ENST00000524429 ASXL1Q8IXJ9 1541 aa11.31□□□□□ -0.6
NECTIN1-204ENST00000524429 MED14O60244 1454 aa11.31□□□□□ -0.6
NECTIN1-204ENST00000524429 RNF166Q96A37 237 aaPredicted RBP11.3□□□□□ -0.6
NECTIN1-204ENST00000524429 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
NECTIN1-204ENST00000524429 C14orf93Q9H972 538 aaKnown RBP11.3□□□□□ -0.6
NECTIN1-204ENST00000524429 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
NECTIN1-204ENST00000524429 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
NECTIN1-204ENST00000524429 QRICH2Q9H0J4 1663 aa11.29□□□□□ -0.6
NECTIN1-204ENST00000524429 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
NECTIN1-204ENST00000524429 STK25O00506 426 aa11.28□□□□□ -0.6
NECTIN1-204ENST00000524429 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
NECTIN1-204ENST00000524429 POTEAQ6S8J7 498 aa11.28□□□□□ -0.6
NECTIN1-204ENST00000524429 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
NECTIN1-204ENST00000524429 USP47Q96K76 1375 aa11.28□□□□□ -0.6
NECTIN1-204ENST00000524429 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-204ENST00000524429 EID1Q9Y6B2 187 aa11.27□□□□□ -0.61
NECTIN1-204ENST00000524429 EIF3AQ14152 1382 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-204ENST00000524429 ADAMTS13Q76LX8 1427 aa11.26□□□□□ -0.61
NECTIN1-204ENST00000524429 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
NECTIN1-204ENST00000524429 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
NECTIN1-204ENST00000524429 TECPR2O15040 1411 aa11.26□□□□□ -0.61
NECTIN1-204ENST00000524429 EIF4G2P78344 907 aaKnown RBP eCLIP11.25□□□□□ -0.61
NECTIN1-204ENST00000524429 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
NECTIN1-204ENST00000524429 PIK3R4Q99570 1358 aa11.25□□□□□ -0.61
NECTIN1-204ENST00000524429 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
NECTIN1-204ENST00000524429 LRRC7Q96NW7 1537 aa11.25□□□□□ -0.61
NECTIN1-204ENST00000524429 LTKP29376 864 aa11.24□□□□□ -0.61
NECTIN1-204ENST00000524429 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
NECTIN1-204ENST00000524429 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
NECTIN1-204ENST00000524429 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
NECTIN1-204ENST00000524429 CFAP70Q5T0N1 1121 aa11.23□□□□□ -0.61
NECTIN1-204ENST00000524429 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
NECTIN1-204ENST00000524429 YTHDC2Q9H6S0 1430 aaKnown RBP11.23□□□□□ -0.61
NECTIN1-204ENST00000524429 ADGRB2O60241 1585 aa11.21□□□□□ -0.61
NECTIN1-204ENST00000524429 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
NECTIN1-204ENST00000524429 FAM135BQ49AJ0 1406 aa11.21□□□□□ -0.61
NECTIN1-204ENST00000524429 LRPPRCP42704 1394 aaKnown RBP11.21□□□□□ -0.61
NECTIN1-204ENST00000524429 ABCC11Q96J66 1382 aa11.21□□□□□ -0.61
NECTIN1-204ENST00000524429 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
NECTIN1-204ENST00000524429 SOX12O15370 315 aa11.2□□□□□ -0.62
NECTIN1-204ENST00000524429 HSPA5P11021 654 aaKnown RBP11.2□□□□□ -0.62
NECTIN1-204ENST00000524429 NUTM2DQ5VT03 806 aaPredicted RBP11.2□□□□□ -0.62
NECTIN1-204ENST00000524429 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
NECTIN1-204ENST00000524429 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
NECTIN1-204ENST00000524429 TBX22Q9Y458 520 aa11.2□□□□□ -0.62
NECTIN1-204ENST00000524429 METP08581 1390 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms