RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 CDK12Q9NYV4 1490 aaPredicted RBP29.57■■■□□ 2.32
TRAPPC9-215ENST00000524162 CCER1Q8TC90 406 aaPredicted RBP29.56■■■□□ 2.32
TRAPPC9-215ENST00000524162 LMOD2Q6P5Q4 547 aa29.53■■■□□ 2.32
TRAPPC9-215ENST00000524162 CABP1Q9NZU7 370 aa29.53■■■□□ 2.32
TRAPPC9-215ENST00000524162 NWD2Q9ULI1 1742 aa29.53■■■□□ 2.32
TRAPPC9-215ENST00000524162 AKAP12Q02952 1782 aa29.52■■■□□ 2.32
TRAPPC9-215ENST00000524162 SLIT2O94813 1529 aa29.52■■■□□ 2.32
TRAPPC9-215ENST00000524162 USP21Q9UK80 565 aa29.52■■■□□ 2.32
TRAPPC9-215ENST00000524162 BCL9LQ86UU0 1499 aa29.51■■■□□ 2.31
TRAPPC9-215ENST00000524162 RXRBP28702 533 aa29.51■■■□□ 2.31
TRAPPC9-215ENST00000524162 ZNF692Q9BU19 519 aaPredicted RBP29.51■■■□□ 2.31
TRAPPC9-215ENST00000524162 PAK3O75914 559 aaPredicted RBP29.5■■■□□ 2.31
TRAPPC9-215ENST00000524162 TESK2Q96S53 571 aa29.5■■■□□ 2.31
TRAPPC9-215ENST00000524162 QTRT2Q9H974 415 aaKnown RBP29.5■■■□□ 2.31
TRAPPC9-215ENST00000524162 USP6P35125 1406 aa29.5■■■□□ 2.31
TRAPPC9-215ENST00000524162 HAP1P54257 671 aaPredicted RBP29.49■■■□□ 2.31
TRAPPC9-215ENST00000524162 RBM6P78332 1123 aaKnown RBP29.49■■■□□ 2.31
TRAPPC9-215ENST00000524162 CABLES1Q8TDN4 633 aa29.49■■■□□ 2.31
TRAPPC9-215ENST00000524162 TRPC5Q9UL62 973 aaPredicted RBP29.49■■■□□ 2.31
TRAPPC9-215ENST00000524162 ATRNO75882 1429 aa29.48■■■□□ 2.31
TRAPPC9-215ENST00000524162 SSH2Q76I76 1423 aa29.48■■■□□ 2.31
TRAPPC9-215ENST00000524162 CPSF1Q10570 1443 aaKnown RBP29.47■■■□□ 2.31
TRAPPC9-215ENST00000524162 ST20-MTHFSA0A0A6YYL1 179 aa29.47■■■□□ 2.31
TRAPPC9-215ENST00000524162 PHRF1Q9P1Y6 1649 aaKnown RBP29.46■■■□□ 2.31
TRAPPC9-215ENST00000524162 USP47Q96K76 1375 aa29.46■■■□□ 2.31
TRAPPC9-215ENST00000524162 PLCH1Q4KWH8 1693 aa29.46■■■□□ 2.31
TRAPPC9-215ENST00000524162 COL14A1Q05707 1796 aaKnown RBP29.44■■■□□ 2.3
TRAPPC9-215ENST00000524162 UNC5CLQ8IV45 518 aa29.43■■■□□ 2.3
TRAPPC9-215ENST00000524162 MON2Q7Z3U7 1717 aa29.42■■■□□ 2.3
TRAPPC9-215ENST00000524162 NINLQ9Y2I6 1382 aa29.42■■■□□ 2.3
TRAPPC9-215ENST00000524162 ABTB2Q8N961 1025 aa29.42■■■□□ 2.3
TRAPPC9-215ENST00000524162 USP19O94966 1318 aa29.42■■■□□ 2.3
TRAPPC9-215ENST00000524162 NLRP13Q86W25 1043 aa29.41■■■□□ 2.3
TRAPPC9-215ENST00000524162 NRKQ7Z2Y5 1582 aa29.4■■■□□ 2.3
TRAPPC9-215ENST00000524162 FAM83GA6ND36 823 aa29.38■■■□□ 2.29
TRAPPC9-215ENST00000524162 TTC21AQ8NDW8 1320 aa29.38■■■□□ 2.29
TRAPPC9-215ENST00000524162 NRAPQ86VF7 1730 aa29.37■■■□□ 2.29
TRAPPC9-215ENST00000524162 CD163L1Q9NR16 1453 aa29.36■■■□□ 2.29
TRAPPC9-215ENST00000524162 PIK3C2AO00443 1686 aa29.36■■■□□ 2.29
TRAPPC9-215ENST00000524162 CPDO75976 1380 aa29.36■■■□□ 2.29
TRAPPC9-215ENST00000524162 GJD4Q96KN9 370 aaPredicted RBP29.35■■■□□ 2.29
TRAPPC9-215ENST00000524162 KTN1Q86UP2 1357 aaKnown RBP29.35■■■□□ 2.29
TRAPPC9-215ENST00000524162 TMF1P82094 1093 aa29.34■■■□□ 2.29
TRAPPC9-215ENST00000524162 SLIT3O75094 1523 aa29.34■■■□□ 2.29
TRAPPC9-215ENST00000524162 VPS72Q15906 364 aa29.33■■■□□ 2.29
TRAPPC9-215ENST00000524162 TTC21BQ7Z4L5 1316 aa29.33■■■□□ 2.29
TRAPPC9-215ENST00000524162 RGS12O14924 1447 aa29.33■■■□□ 2.29
TRAPPC9-215ENST00000524162 USP54Q70EL1 1684 aa29.32■■■□□ 2.28
TRAPPC9-215ENST00000524162 CDCA8Q53HL2 280 aa29.32■■■□□ 2.28
TRAPPC9-215ENST00000524162 TERF2IPQ9NYB0 399 aa29.32■■■□□ 2.28
TRAPPC9-215ENST00000524162 PRDM11Q9NQV5 511 aa29.31■■■□□ 2.28
TRAPPC9-215ENST00000524162 KIAA0232Q92628 1395 aa29.3■■■□□ 2.28
TRAPPC9-215ENST00000524162 GLI3P10071 1580 aa29.3■■■□□ 2.28
TRAPPC9-215ENST00000524162 PLEKHG5O94827 1062 aa29.29■■■□□ 2.28
TRAPPC9-215ENST00000524162 GCP02774 474 aa29.29■■■□□ 2.28
TRAPPC9-215ENST00000524162 NLRP6P59044 892 aa29.29■■■□□ 2.28
TRAPPC9-215ENST00000524162 HDGFL2Q7Z4V5 671 aaPredicted RBP29.29■■■□□ 2.28
TRAPPC9-215ENST00000524162 EDC4Q6P2E9 1401 aaKnown RBP29.28■■■□□ 2.28
TRAPPC9-215ENST00000524162 NUTM2GQ5VZR2 741 aa29.28■■■□□ 2.28
TRAPPC9-215ENST00000524162 SLC12A5Q9H2X9 1139 aa29.28■■■□□ 2.28
TRAPPC9-215ENST00000524162 TMC1Q8TDI8 760 aa29.27■■■□□ 2.28
TRAPPC9-215ENST00000524162 BTG4Q9NY30 223 aa29.27■■■□□ 2.28
TRAPPC9-215ENST00000524162 USP31Q70CQ4 1352 aa29.26■■■□□ 2.28
TRAPPC9-215ENST00000524162 LMO7Q8WWI1 1683 aa29.26■■■□□ 2.27
TRAPPC9-215ENST00000524162 ONECUT3O60422 494 aaPredicted RBP29.25■■■□□ 2.27
TRAPPC9-215ENST00000524162 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
TRAPPC9-215ENST00000524162 KCNH5Q8NCM2 988 aa29.23■■■□□ 2.27
TRAPPC9-215ENST00000524162 ZC3H6P61129 1189 aaKnown RBP29.22■■■□□ 2.27
TRAPPC9-215ENST00000524162 ANKRD36BQ8N2N9 1353 aa29.21■■■□□ 2.27
TRAPPC9-215ENST00000524162 EIF4G2P78344 907 aaKnown RBP eCLIP29.2■■■□□ 2.268e-7■■■■■ 44
TRAPPC9-215ENST00000524162 AATKQ6ZMQ8 1374 aa29.19■■■□□ 2.26
TRAPPC9-215ENST00000524162 CAMTA1Q9Y6Y1 1673 aa29.18■■■□□ 2.26
TRAPPC9-215ENST00000524162 ABCC6O95255 1503 aa29.18■■■□□ 2.26
TRAPPC9-215ENST00000524162 COL18A1P39060 1754 aa29.17■■■□□ 2.26
TRAPPC9-215ENST00000524162 EP400Q96L91 3159 aa29.17■■■□□ 2.26
TRAPPC9-215ENST00000524162 SPATA31A5Q5VU36 1347 aa29.17■■■□□ 2.26
TRAPPC9-215ENST00000524162 SPATA31A7Q8IWB4 1347 aa29.17■■■□□ 2.26
TRAPPC9-215ENST00000524162 CHRNA2Q15822 529 aa29.16■■■□□ 2.26
TRAPPC9-215ENST00000524162 NFAT5O94916 1531 aa29.15■■■□□ 2.26
TRAPPC9-215ENST00000524162 MYOM1P52179 1685 aa29.14■■■□□ 2.26
TRAPPC9-215ENST00000524162 BRWD3Q6RI45 1802 aa29.13■■■□□ 2.25
TRAPPC9-215ENST00000524162 ARHGEF25Q86VW2 580 aa29.13■■■□□ 2.25
TRAPPC9-215ENST00000524162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.13■■■□□ 2.25
TRAPPC9-215ENST00000524162 CCDC9Q9Y3X0 531 aaKnown RBP29.13■■■□□ 2.25
TRAPPC9-215ENST00000524162 OVOS2A0A0J9YW53 1432 aa29.12■■■□□ 2.25
TRAPPC9-215ENST00000524162 OVOS2Q6IE36 1432 aa29.12■■■□□ 2.25
TRAPPC9-215ENST00000524162 UPF1Q92900 1129 aaKnown RBP eCLIP29.12■■■□□ 2.25
TRAPPC9-215ENST00000524162 SPATA31A1Q5TZJ5 1347 aa29.11■■■□□ 2.25
TRAPPC9-215ENST00000524162 COL5A2P05997 1499 aaPredicted RBP29.1■■■□□ 2.25
TRAPPC9-215ENST00000524162 NME9Q86XW9 330 aa29.1■■■□□ 2.25
TRAPPC9-215ENST00000524162 THSD7AQ9UPZ6 1657 aa29.09■■■□□ 2.25
TRAPPC9-215ENST00000524162 HSPA5P11021 654 aaKnown RBP29.08■■■□□ 2.25
TRAPPC9-215ENST00000524162 EVA1CP58658 441 aa29.08■■■□□ 2.25
TRAPPC9-215ENST00000524162 SEPT12Q8IYM1 358 aa29.08■■■□□ 2.25
TRAPPC9-215ENST00000524162 BARGINQ6ZT62 677 aa29.05■■■□□ 2.24
TRAPPC9-215ENST00000524162 STRN4Q9NRL3 753 aa29.05■■■□□ 2.24
TRAPPC9-215ENST00000524162 THRAP3Q9Y2W1 955 aaKnown RBP29.05■■■□□ 2.24
TRAPPC9-215ENST00000524162 LTN1O94822 1766 aa29.05■■■□□ 2.24
TRAPPC9-215ENST00000524162 CRB1P82279 1406 aa29.03■■■□□ 2.24
TRAPPC9-215ENST00000524162 RGPD5Q99666 1765 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms