RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 DMTNQ08495 405 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 UVSSAQ2YD98 709 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 RPAINQ86UA6 219 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 P3H3Q8IVL6 736 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 ITFG2Q969R8 447 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 DDRGK1Q96HY6 314 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 ANAPC4Q9UJX5 808 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 RPGRIP1LQ68CZ1 1315 aa8.18□□□□□ -1.1
SDC2-208ENST00000523877 STK10O94804 968 aaKnown RBP8.17□□□□□ -1.1
SDC2-208ENST00000523877 LETM1O95202 739 aaPredicted RBP8.17□□□□□ -1.1
SDC2-208ENST00000523877 HOXB3P14651 431 aaPredicted RBP8.17□□□□□ -1.1
SDC2-208ENST00000523877 APLP1P51693 650 aa8.17□□□□□ -1.1
SDC2-208ENST00000523877 AMOTL1Q8IY63 956 aa8.17□□□□□ -1.1
SDC2-208ENST00000523877 TSPYL1Q9H0U9 437 aa8.17□□□□□ -1.1
SDC2-208ENST00000523877 NEFHP12036 1026 aa8.16□□□□□ -1.1
SDC2-208ENST00000523877 TCF3P15923 654 aa8.16□□□□□ -1.1
SDC2-208ENST00000523877 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
SDC2-208ENST00000523877 GTPBP4Q9BZE4 634 aaKnown RBP8.16□□□□□ -1.1
SDC2-208ENST00000523877 NBPF3Q9H094 633 aa8.16□□□□□ -1.1
SDC2-208ENST00000523877 SUDS3Q9H7L9 328 aaPredicted RBP8.16□□□□□ -1.1
SDC2-208ENST00000523877 BOLA1Q9Y3E2 137 aa8.16□□□□□ -1.1
SDC2-208ENST00000523877 FAM200BP0CF97 657 aa8.15□□□□□ -1.1
SDC2-208ENST00000523877 PEX19P40855 299 aa8.15□□□□□ -1.1
SDC2-208ENST00000523877 CDC37Q16543 378 aaPredicted RBP8.15□□□□□ -1.1
SDC2-208ENST00000523877 NGEFQ8N5V2 710 aa8.15□□□□□ -1.1
SDC2-208ENST00000523877 ATL2Q8NHH9 583 aa8.15□□□□□ -1.1
SDC2-208ENST00000523877 SPOCK3Q9BQ16 436 aa8.15□□□□□ -1.1
SDC2-208ENST00000523877 ERBB3P21860 1342 aa8.14□□□□□ -1.11
SDC2-208ENST00000523877 WDHD1O75717 1129 aaPredicted RBP8.14□□□□□ -1.11
SDC2-208ENST00000523877 RGL3Q3MIN7 710 aa8.14□□□□□ -1.11
SDC2-208ENST00000523877 LSM14AQ8ND56 463 aaKnown RBP8.14□□□□□ -1.11
SDC2-208ENST00000523877 RNF25Q96BH1 459 aaPredicted RBP8.14□□□□□ -1.11
SDC2-208ENST00000523877 PNNQ9H307 717 aaKnown RBP8.14□□□□□ -1.11
SDC2-208ENST00000523877 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
SDC2-208ENST00000523877 TPX2Q9ULW0 747 aaKnown RBP8.14□□□□□ -1.11
SDC2-208ENST00000523877 SYNRGQ9UMZ2 1314 aa8.13□□□□□ -1.11
SDC2-208ENST00000523877 NEXNQ0ZGT2 675 aa8.13□□□□□ -1.11
SDC2-208ENST00000523877 HSP90AB2PQ58FF8 381 aa8.13□□□□□ -1.11
SDC2-208ENST00000523877 GJC2Q5T442 439 aaPredicted RBP8.13□□□□□ -1.11
SDC2-208ENST00000523877 ZNF662Q6ZS27 426 aa8.13□□□□□ -1.11
SDC2-208ENST00000523877 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
SDC2-208ENST00000523877 PNISRQ8TF01 805 aaKnown RBP8.13□□□□□ -1.11
SDC2-208ENST00000523877 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
SDC2-208ENST00000523877 SMC3Q9UQE7 1217 aa8.13□□□□□ -1.11
SDC2-208ENST00000523877 CEP83Q9Y592 693 aa8.13□□□□□ -1.11
SDC2-208ENST00000523877 IPO8O15397 1037 aaKnown RBP8.12□□□□□ -1.11
SDC2-208ENST00000523877 DNAJC14Q6Y2X3 702 aaPredicted RBP8.12□□□□□ -1.11
SDC2-208ENST00000523877 UBXN4Q92575 508 aa8.12□□□□□ -1.11
SDC2-208ENST00000523877 CLUAP1Q96AJ1 413 aa8.12□□□□□ -1.11
SDC2-208ENST00000523877 ZNF777Q9ULD5 760 aaPredicted RBP8.12□□□□□ -1.11
SDC2-208ENST00000523877 ERCC6Q03468 1493 aa8.12□□□□□ -1.11
SDC2-208ENST00000523877 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
SDC2-208ENST00000523877 PMM1Q92871 262 aa8.11□□□□□ -1.11
SDC2-208ENST00000523877 CCDC94Q9BW85 323 aaPredicted RBP8.11□□□□□ -1.11
SDC2-208ENST00000523877 IRF2BPLQ9H1B7 796 aa8.11□□□□□ -1.11
SDC2-208ENST00000523877 CCDC194A0A1B0GVG4 234 aa8.1□□□□□ -1.11
SDC2-208ENST00000523877 MPHOSPH10O00566 681 aaKnown RBP8.1□□□□□ -1.11
SDC2-208ENST00000523877 PSMC1P62191 440 aaKnown RBP8.1□□□□□ -1.11
SDC2-208ENST00000523877 MYCBPQ99417 103 aaPredicted RBP8.1□□□□□ -1.11
SDC2-208ENST00000523877 SENP7Q9BQF6 1050 aa8.1□□□□□ -1.11
SDC2-208ENST00000523877 EFCC1Q9HA90 598 aa8.1□□□□□ -1.11
SDC2-208ENST00000523877 SWAP70Q9UH65 585 aa8.1□□□□□ -1.11
SDC2-208ENST00000523877 FBXO9Q9UK97 447 aaPredicted RBP8.1□□□□□ -1.11
SDC2-208ENST00000523877 ARIH1Q9Y4X5 557 aaPredicted RBP8.1□□□□□ -1.11
SDC2-208ENST00000523877 STK24Q9Y6E0 443 aa8.1□□□□□ -1.11
SDC2-208ENST00000523877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.09□□□□□ -1.11
SDC2-208ENST00000523877 BDNFP23560 247 aa8.09□□□□□ -1.11
SDC2-208ENST00000523877 TDO2P48775 406 aa8.09□□□□□ -1.11
SDC2-208ENST00000523877 GYS2P54840 703 aa8.09□□□□□ -1.11
SDC2-208ENST00000523877 SF3B2Q13435 895 aaKnown RBP8.09□□□□□ -1.11
SDC2-208ENST00000523877 HSP90B2PQ58FF3 399 aa8.09□□□□□ -1.11
SDC2-208ENST00000523877 ICE2Q659A1 982 aa8.09□□□□□ -1.11
SDC2-208ENST00000523877 C8orf37Q96NL8 207 aa8.09□□□□□ -1.11
SDC2-208ENST00000523877 GNL3LQ9NVN8 582 aaKnown RBP8.09□□□□□ -1.11
SDC2-208ENST00000523877 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
SDC2-208ENST00000523877 SMAPO00193 183 aa8.08□□□□□ -1.12
SDC2-208ENST00000523877 HOXB1P14653 301 aaPredicted RBP8.08□□□□□ -1.12
SDC2-208ENST00000523877 POU5F1Q01860 360 aaKnown RBP8.08□□□□□ -1.12
SDC2-208ENST00000523877 TBC1D10BQ4KMP7 808 aaPredicted RBP8.08□□□□□ -1.12
SDC2-208ENST00000523877 L1TD1Q5T7N2 865 aaKnown RBP8.08□□□□□ -1.12
SDC2-208ENST00000523877 GIMAP6Q6P9H5 292 aa8.08□□□□□ -1.12
SDC2-208ENST00000523877 EFCAB3Q8N7B9 438 aa8.08□□□□□ -1.12
SDC2-208ENST00000523877 KCNV2Q8TDN2 545 aa8.08□□□□□ -1.12
SDC2-208ENST00000523877 CDCA7Q9BWT1 371 aaPredicted RBP8.08□□□□□ -1.12
SDC2-208ENST00000523877 ZHX1Q9UKY1 873 aaPredicted RBP8.08□□□□□ -1.12
SDC2-208ENST00000523877 RBM47A0AV96 593 aaKnown RBP8.07□□□□□ -1.12
SDC2-208ENST00000523877 BICDL2A1A5D9 508 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 G3V3G9 751 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 PPP1R12AO14974 1030 aaPredicted RBP8.07□□□□□ -1.12
SDC2-208ENST00000523877 CTAGE5O15320 804 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 CBFA2T2O43439 604 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 KIF1CO43896 1103 aaKnown RBP8.07□□□□□ -1.12
SDC2-208ENST00000523877 COQ9O75208 318 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 CD151P48509 253 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 HDLBPQ00341 1268 aaKnown RBP8.07□□□□□ -1.12
SDC2-208ENST00000523877 KIAA2012Q0VF49 1180 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 TMEM92Q6UXU6 159 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 CCAR1Q8IX12 1150 aaKnown RBP8.07□□□□□ -1.12
SDC2-208ENST00000523877 HS6ST3Q8IZP7 471 aa8.07□□□□□ -1.12
SDC2-208ENST00000523877 KDM4CQ9H3R0 1056 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms