RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 NUTM2EB1AL46 878 aaPredicted RBP9.75□□□□□ -0.85
CLK4-213ENST00000523013 CTC1Q2NKJ3 1217 aa9.75□□□□□ -0.85
CLK4-213ENST00000523013 RTL5Q5HYW3 569 aaPredicted RBP9.75□□□□□ -0.85
CLK4-213ENST00000523013 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
CLK4-213ENST00000523013 NUTM2AQ8IVF1 878 aaPredicted RBP9.75□□□□□ -0.85
CLK4-213ENST00000523013 FAM117AQ9C073 453 aa9.75□□□□□ -0.85
CLK4-213ENST00000523013 MAP10Q9P2G4 905 aa9.75□□□□□ -0.85
CLK4-213ENST00000523013 AXIN1O15169 862 aa9.74□□□□□ -0.85
CLK4-213ENST00000523013 CTHP32929 405 aa9.74□□□□□ -0.85
CLK4-213ENST00000523013 ZNF511Q8NB15 262 aa9.74□□□□□ -0.85
CLK4-213ENST00000523013 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
CLK4-213ENST00000523013 HPS1Q92902 700 aa9.73□□□□□ -0.85
CLK4-213ENST00000523013 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
CLK4-213ENST00000523013 ALDH1A1P00352 501 aa9.72□□□□□ -0.85
CLK4-213ENST00000523013 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.86
CLK4-213ENST00000523013 FBXO31Q5XUX0 539 aaPredicted RBP9.71□□□□□ -0.86
CLK4-213ENST00000523013 TSC1Q92574 1164 aa9.71□□□□□ -0.86
CLK4-213ENST00000523013 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.86
CLK4-213ENST00000523013 SKIV2LQ15477 1246 aaKnown RBP9.7□□□□□ -0.86
CLK4-213ENST00000523013 PROCA1Q8NCQ7 364 aaPredicted RBP9.68□□□□□ -0.86
CLK4-213ENST00000523013 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
CLK4-213ENST00000523013 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLK4-213ENST00000523013 VARSP26640 1264 aaKnown RBP9.67□□□□□ -0.86
CLK4-213ENST00000523013 FOXJ1Q92949 421 aa9.67□□□□□ -0.86
CLK4-213ENST00000523013 ZNF775Q96BV0 537 aaPredicted RBP9.67□□□□□ -0.86
CLK4-213ENST00000523013 GMPR2Q9P2T1 348 aaKnown RBP9.67□□□□□ -0.86
CLK4-213ENST00000523013 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
CLK4-213ENST00000523013 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.86
CLK4-213ENST00000523013 MPNDQ8N594 471 aa9.65□□□□□ -0.86
CLK4-213ENST00000523013 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
CLK4-213ENST00000523013 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
CLK4-213ENST00000523013 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
CLK4-213ENST00000523013 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
CLK4-213ENST00000523013 ARMC2Q8NEN0 867 aa9.61□□□□□ -0.87
CLK4-213ENST00000523013 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
CLK4-213ENST00000523013 C11orf95C9JLR9 678 aaPredicted RBP9.6□□□□□ -0.87
CLK4-213ENST00000523013 SH3RF1Q7Z6J0 888 aa9.6□□□□□ -0.87
CLK4-213ENST00000523013 LRRN4Q8WUT4 740 aa9.6□□□□□ -0.87
CLK4-213ENST00000523013 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
CLK4-213ENST00000523013 NEUROD2Q15784 382 aa9.59□□□□□ -0.87
CLK4-213ENST00000523013 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
CLK4-213ENST00000523013 BPHLQ86WA6 291 aaPredicted RBP9.59□□□□□ -0.87
CLK4-213ENST00000523013 NNTQ13423 1086 aa9.58□□□□□ -0.88
CLK4-213ENST00000523013 AGERQ15109 404 aa9.58□□□□□ -0.88
CLK4-213ENST00000523013 NBPF14Q5TI25 921 aa9.58□□□□□ -0.88
CLK4-213ENST00000523013 C1QTNF2Q9BXJ5 285 aa9.58□□□□□ -0.88
CLK4-213ENST00000523013 CAPN5O15484 640 aaPredicted RBP9.57□□□□□ -0.88
CLK4-213ENST00000523013 ADH1CP00326 375 aa9.57□□□□□ -0.88
CLK4-213ENST00000523013 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
CLK4-213ENST00000523013 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
CLK4-213ENST00000523013 BMP1P13497 986 aa9.56□□□□□ -0.88
CLK4-213ENST00000523013 SNRPBP14678 240 aaKnown RBP9.56□□□□□ -0.88
CLK4-213ENST00000523013 BRPF1P55201 1214 aaPredicted RBP9.56□□□□□ -0.88
CLK4-213ENST00000523013 TRIM46Q7Z4K8 759 aa9.56□□□□□ -0.88
CLK4-213ENST00000523013 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
CLK4-213ENST00000523013 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
CLK4-213ENST00000523013 AP1G2O75843 785 aa9.55□□□□□ -0.88
CLK4-213ENST00000523013 GRM5P41594 1212 aa9.55□□□□□ -0.88
CLK4-213ENST00000523013 NR6A1Q15406 480 aa9.55□□□□□ -0.88
CLK4-213ENST00000523013 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
CLK4-213ENST00000523013 SENP2Q9HC62 589 aa9.55□□□□□ -0.88
CLK4-213ENST00000523013 TIMP2P16035 220 aa9.54□□□□□ -0.88
CLK4-213ENST00000523013 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
CLK4-213ENST00000523013 IL27Q8NEV9 243 aa9.54□□□□□ -0.88
CLK4-213ENST00000523013 NR3C2P08235 984 aa9.53□□□□□ -0.88
CLK4-213ENST00000523013 RFC5P40937 340 aa9.53□□□□□ -0.88
CLK4-213ENST00000523013 TPRNQ4KMQ1 711 aa9.53□□□□□ -0.88
CLK4-213ENST00000523013 LCE2AQ5TA79 106 aaPredicted RBP9.53□□□□□ -0.88
CLK4-213ENST00000523013 TRMT44Q8IYL2 757 aaKnown RBP9.53□□□□□ -0.88
CLK4-213ENST00000523013 FKBPLQ9UIM3 349 aa9.53□□□□□ -0.88
CLK4-213ENST00000523013 MAGEB6P1A0A0J9YX57 407 aa9.52□□□□□ -0.89
CLK4-213ENST00000523013 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
CLK4-213ENST00000523013 NR5A1Q13285 461 aa9.52□□□□□ -0.89
CLK4-213ENST00000523013 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
CLK4-213ENST00000523013 KIFC2Q96AC6 838 aa9.52□□□□□ -0.89
CLK4-213ENST00000523013 HMX1Q9NP08 348 aaPredicted RBP9.52□□□□□ -0.89
CLK4-213ENST00000523013 USP17L8P0C7I0 530 aa9.51□□□□□ -0.89
CLK4-213ENST00000523013 PDXDC2PQ6P474 469 aa9.51□□□□□ -0.89
CLK4-213ENST00000523013 PCMTD1Q96MG8 357 aaPredicted RBP9.51□□□□□ -0.89
CLK4-213ENST00000523013 MAP4K5Q9Y4K4 846 aa9.51□□□□□ -0.89
CLK4-213ENST00000523013 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
CLK4-213ENST00000523013 TREML4Q6UXN2 200 aa9.5□□□□□ -0.89
CLK4-213ENST00000523013 CARD14Q9BXL6 1004 aa9.5□□□□□ -0.89
CLK4-213ENST00000523013 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
CLK4-213ENST00000523013 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
CLK4-213ENST00000523013 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
CLK4-213ENST00000523013 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
CLK4-213ENST00000523013 FSHRP23945 695 aa9.48□□□□□ -0.89
CLK4-213ENST00000523013 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
CLK4-213ENST00000523013 MRPL14Q6P1L8 145 aaKnown RBP9.47□□□□□ -0.89
CLK4-213ENST00000523013 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
CLK4-213ENST00000523013 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
CLK4-213ENST00000523013 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
CLK4-213ENST00000523013 NFX1Q12986 1120 aaKnown RBP9.46□□□□□ -0.9
CLK4-213ENST00000523013 TMEM259Q4ZIN3 620 aa9.45□□□□□ -0.9
CLK4-213ENST00000523013 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
CLK4-213ENST00000523013 GPSM3Q9Y4H4 160 aa9.44□□□□□ -0.9
CLK4-213ENST00000523013 WFS1O76024 890 aa9.43□□□□□ -0.9
CLK4-213ENST00000523013 PTK2Q05397 1052 aa9.43□□□□□ -0.9
CLK4-213ENST00000523013 LCE2CQ5TA81 110 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms