RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SLC6A16Q9GZN6 736 aa11.6□□□□□ -0.55
SDCBP-210ENST00000522843 YEATS2Q9ULM3 1422 aa11.6□□□□□ -0.55
SDCBP-210ENST00000522843 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
SDCBP-210ENST00000522843 FHOD3Q2V2M9 1422 aa11.59□□□□□ -0.55
SDCBP-210ENST00000522843 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.55
SDCBP-210ENST00000522843 OATP04181 439 aa11.58□□□□□ -0.56
SDCBP-210ENST00000522843 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
SDCBP-210ENST00000522843 DENND4BO75064 1496 aaPredicted RBP11.57□□□□□ -0.56
SDCBP-210ENST00000522843 TNFRSF10AO00220 468 aa11.57□□□□□ -0.56
SDCBP-210ENST00000522843 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
SDCBP-210ENST00000522843 ZMYM4Q5VZL5 1548 aa11.56□□□□□ -0.56
SDCBP-210ENST00000522843 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
SDCBP-210ENST00000522843 AKNAQ7Z591 1439 aa11.56□□□□□ -0.56
SDCBP-210ENST00000522843 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
SDCBP-210ENST00000522843 PXYLP1Q8TE99 480 aa11.56□□□□□ -0.56
SDCBP-210ENST00000522843 FER1L4A9Z1Z3 1794 aa11.56□□□□□ -0.56
SDCBP-210ENST00000522843 FANCAO15360 1455 aa11.56□□□□□ -0.56
SDCBP-210ENST00000522843 POTECB2RU33 542 aa11.55□□□□□ -0.56
SDCBP-210ENST00000522843 MLECQ14165 292 aa11.55□□□□□ -0.56
SDCBP-210ENST00000522843 PLA2G2CQ5R387 149 aa11.55□□□□□ -0.56
SDCBP-210ENST00000522843 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
SDCBP-210ENST00000522843 ZFYVE16Q7Z3T8 1539 aa11.55□□□□□ -0.56
SDCBP-210ENST00000522843 POGZQ7Z3K3 1410 aa11.54□□□□□ -0.56
SDCBP-210ENST00000522843 ARHGEF12Q9NZN5 1544 aa11.54□□□□□ -0.56
SDCBP-210ENST00000522843 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
SDCBP-210ENST00000522843 CEBPAP49715 358 aaPredicted RBP11.53□□□□□ -0.56
SDCBP-210ENST00000522843 PUS10Q3MIT2 529 aaKnown RBP11.53□□□□□ -0.56
SDCBP-210ENST00000522843 SPSB2Q99619 263 aa11.53□□□□□ -0.56
SDCBP-210ENST00000522843 LTBP4Q8N2S1 1624 aa11.53□□□□□ -0.56
SDCBP-210ENST00000522843 HECW1Q76N89 1606 aa11.52□□□□□ -0.57
SDCBP-210ENST00000522843 RAPGEF6Q8TEU7 1601 aa11.52□□□□□ -0.57
SDCBP-210ENST00000522843 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
SDCBP-210ENST00000522843 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
SDCBP-210ENST00000522843 SEMA3EO15041 775 aa11.51□□□□□ -0.57
SDCBP-210ENST00000522843 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
SDCBP-210ENST00000522843 METTL3Q86U44 580 aaKnown RBP11.5□□□□□ -0.57
SDCBP-210ENST00000522843 MAGI2Q86UL8 1455 aa11.5□□□□□ -0.57
SDCBP-210ENST00000522843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.5□□□□□ -0.57
SDCBP-210ENST00000522843 HIC1Q14526 733 aa11.49□□□□□ -0.57
SDCBP-210ENST00000522843 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
SDCBP-210ENST00000522843 AAASQ9NRG9 546 aa11.49□□□□□ -0.57
SDCBP-210ENST00000522843 PTPRTO14522 1441 aa11.49□□□□□ -0.57
SDCBP-210ENST00000522843 FOXC1Q12948 553 aa11.48□□□□□ -0.57
SDCBP-210ENST00000522843 PKD2L1Q9P0L9 805 aa11.48□□□□□ -0.57
SDCBP-210ENST00000522843 CFAP74Q9C0B2 1584 aa11.46□□□□□ -0.57
SDCBP-210ENST00000522843 ST8SIA5O15466 376 aa11.46□□□□□ -0.57
SDCBP-210ENST00000522843 RPIAP49247 311 aa11.46□□□□□ -0.57
SDCBP-210ENST00000522843 ATP10AO60312 1499 aa11.45□□□□□ -0.58
SDCBP-210ENST00000522843 IQSEC2Q5JU85 1478 aa11.45□□□□□ -0.58
SDCBP-210ENST00000522843 UHRF1BP1Q6BDS2 1440 aa11.45□□□□□ -0.58
SDCBP-210ENST00000522843 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
SDCBP-210ENST00000522843 CD2BP2O95400 341 aaKnown RBP11.44□□□□□ -0.58
SDCBP-210ENST00000522843 MORN1Q5T089 497 aa11.44□□□□□ -0.58
SDCBP-210ENST00000522843 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
SDCBP-210ENST00000522843 SCAPERQ9BY12 1400 aa11.43□□□□□ -0.58
SDCBP-210ENST00000522843 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
SDCBP-210ENST00000522843 RDH13Q8NBN7 331 aa11.43□□□□□ -0.58
SDCBP-210ENST00000522843 THAP11Q96EK4 314 aa11.43□□□□□ -0.58
SDCBP-210ENST00000522843 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
SDCBP-210ENST00000522843 ATP6V1AP38606 617 aa11.42□□□□□ -0.58
SDCBP-210ENST00000522843 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
SDCBP-210ENST00000522843 GNPATO15228 680 aa11.41□□□□□ -0.58
SDCBP-210ENST00000522843 FUT2Q10981 343 aa11.41□□□□□ -0.58
SDCBP-210ENST00000522843 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
SDCBP-210ENST00000522843 TREML4Q6UXN2 200 aa11.41□□□□□ -0.58
SDCBP-210ENST00000522843 CRIPAKQ8N1N5 446 aa11.41□□□□□ -0.58
SDCBP-210ENST00000522843 FCF1Q9Y324 198 aaKnown RBP11.41□□□□□ -0.58
SDCBP-210ENST00000522843 NCOA1Q15788 1441 aa11.41□□□□□ -0.58
SDCBP-210ENST00000522843 C3P01024 1663 aa11.4□□□□□ -0.58
SDCBP-210ENST00000522843 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
SDCBP-210ENST00000522843 FECHP22830 423 aa11.4□□□□□ -0.58
SDCBP-210ENST00000522843 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
SDCBP-210ENST00000522843 TOR4AQ9NXH8 423 aa11.4□□□□□ -0.58
SDCBP-210ENST00000522843 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
SDCBP-210ENST00000522843 PLCH2O75038 1416 aa11.39□□□□□ -0.59
SDCBP-210ENST00000522843 AVPP01185 164 aa11.39□□□□□ -0.59
SDCBP-210ENST00000522843 SMYD5Q6GMV2 418 aa11.39□□□□□ -0.59
SDCBP-210ENST00000522843 FAM160A2Q8N612 972 aaPredicted RBP11.39□□□□□ -0.59
SDCBP-210ENST00000522843 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
SDCBP-210ENST00000522843 CYP4X1Q8N118 509 aa11.38□□□□□ -0.59
SDCBP-210ENST00000522843 SLC27A5Q9Y2P5 690 aa11.38□□□□□ -0.59
SDCBP-210ENST00000522843 GCGRP47871 477 aa11.37□□□□□ -0.59
SDCBP-210ENST00000522843 LCE2AQ5TA79 106 aaPredicted RBP11.37□□□□□ -0.59
SDCBP-210ENST00000522843 SALL2Q9Y467 1007 aaPredicted RBP11.37□□□□□ -0.59
SDCBP-210ENST00000522843 ZNF335Q9H4Z2 1342 aaPredicted RBP11.36□□□□□ -0.59
SDCBP-210ENST00000522843 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
SDCBP-210ENST00000522843 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
SDCBP-210ENST00000522843 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
SDCBP-210ENST00000522843 DIP2CQ9Y2E4 1556 aa11.36□□□□□ -0.59
SDCBP-210ENST00000522843 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
SDCBP-210ENST00000522843 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
SDCBP-210ENST00000522843 AXIN1O15169 862 aa11.35□□□□□ -0.59
SDCBP-210ENST00000522843 SULF1Q8IWU6 871 aa11.35□□□□□ -0.59
SDCBP-210ENST00000522843 KDM5CP41229 1560 aa11.35□□□□□ -0.59
SDCBP-210ENST00000522843 REREQ9P2R6 1566 aa11.34□□□□□ -0.59
SDCBP-210ENST00000522843 CTC1Q2NKJ3 1217 aa11.34□□□□□ -0.59
SDCBP-210ENST00000522843 BRICD5Q6PL45 260 aa11.34□□□□□ -0.59
SDCBP-210ENST00000522843 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
SDCBP-210ENST00000522843 CAMSAP1Q5T5Y3 1602 aa11.34□□□□□ -0.59
SDCBP-210ENST00000522843 GPR37O15354 613 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms