RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
PABPC1-221ENST00000522720 USP21Q9UK80 565 aa23.17■■□□□ 1.3
PABPC1-221ENST00000522720 RXRBP28702 533 aa23.16■■□□□ 1.3
PABPC1-221ENST00000522720 ABCA3Q99758 1704 aa23.15■■□□□ 1.3
PABPC1-221ENST00000522720 ATAD2Q6PL18 1390 aa23.14■■□□□ 1.3
PABPC1-221ENST00000522720 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
PABPC1-221ENST00000522720 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.29
PABPC1-221ENST00000522720 BCL9LQ86UU0 1499 aa23.12■■□□□ 1.29
PABPC1-221ENST00000522720 TESK2Q96S53 571 aa23.12■■□□□ 1.29
PABPC1-221ENST00000522720 TRPC5Q9UL62 973 aaPredicted RBP23.12■■□□□ 1.29
PABPC1-221ENST00000522720 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
PABPC1-221ENST00000522720 RBM6P78332 1123 aaKnown RBP23.11■■□□□ 1.29
PABPC1-221ENST00000522720 SLIT2O94813 1529 aa23.1■■□□□ 1.29
PABPC1-221ENST00000522720 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
PABPC1-221ENST00000522720 PUS7Q96PZ0 661 aaKnown RBP23.1■■□□□ 1.29
PABPC1-221ENST00000522720 ZNF692Q9BU19 519 aaPredicted RBP23.1■■□□□ 1.29
PABPC1-221ENST00000522720 USP6P35125 1406 aa23.09■■□□□ 1.29
PABPC1-221ENST00000522720 CRYBG1Q9Y4K1 1723 aa23.09■■□□□ 1.29
PABPC1-221ENST00000522720 FAM83GA6ND36 823 aa23.09■■□□□ 1.29
PABPC1-221ENST00000522720 USP47Q96K76 1375 aa23.09■■□□□ 1.29
PABPC1-221ENST00000522720 ATRNO75882 1429 aa23.08■■□□□ 1.29
PABPC1-221ENST00000522720 NUTM2GQ5VZR2 741 aa23.08■■□□□ 1.29
PABPC1-221ENST00000522720 UNC5CLQ8IV45 518 aa23.08■■□□□ 1.29
PABPC1-221ENST00000522720 CDK12Q9NYV4 1490 aaPredicted RBP23.08■■□□□ 1.29
PABPC1-221ENST00000522720 SSH2Q76I76 1423 aa23.08■■□□□ 1.28
PABPC1-221ENST00000522720 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
PABPC1-221ENST00000522720 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.05■■□□□ 1.28
PABPC1-221ENST00000522720 AKAP12Q02952 1782 aa23.05■■□□□ 1.28
PABPC1-221ENST00000522720 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
PABPC1-221ENST00000522720 NWD2Q9ULI1 1742 aa23.04■■□□□ 1.28
PABPC1-221ENST00000522720 TMC1Q8TDI8 760 aa23.03■■□□□ 1.28
PABPC1-221ENST00000522720 USP19O94966 1318 aa23.03■■□□□ 1.28
PABPC1-221ENST00000522720 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
PABPC1-221ENST00000522720 PHRF1Q9P1Y6 1649 aaKnown RBP23.02■■□□□ 1.28
PABPC1-221ENST00000522720 GJD4Q96KN9 370 aaPredicted RBP23.02■■□□□ 1.28
PABPC1-221ENST00000522720 SLC12A5Q9H2X9 1139 aa23.02■■□□□ 1.28
PABPC1-221ENST00000522720 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
PABPC1-221ENST00000522720 TTC21BQ7Z4L5 1316 aa23.01■■□□□ 1.27
PABPC1-221ENST00000522720 COL14A1Q05707 1796 aaKnown RBP23.01■■□□□ 1.27
PABPC1-221ENST00000522720 NLRP6P59044 892 aa23■■□□□ 1.27
PABPC1-221ENST00000522720 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
PABPC1-221ENST00000522720 TMF1P82094 1093 aa23■■□□□ 1.27
PABPC1-221ENST00000522720 PRDM11Q9NQV5 511 aa23■■□□□ 1.27
PABPC1-221ENST00000522720 KIAA0232Q92628 1395 aa23■■□□□ 1.27
PABPC1-221ENST00000522720 GCP02774 474 aa22.99■■□□□ 1.27
PABPC1-221ENST00000522720 VPS72Q15906 364 aa22.99■■□□□ 1.27
PABPC1-221ENST00000522720 BTG4Q9NY30 223 aa22.99■■□□□ 1.27
PABPC1-221ENST00000522720 TTC21AQ8NDW8 1320 aa22.99■■□□□ 1.27
PABPC1-221ENST00000522720 RGS12O14924 1447 aa22.99■■□□□ 1.27
PABPC1-221ENST00000522720 CD163L1Q9NR16 1453 aa22.98■■□□□ 1.27
PABPC1-221ENST00000522720 PIK3C2AO00443 1686 aa22.97■■□□□ 1.27
PABPC1-221ENST00000522720 MON2Q7Z3U7 1717 aa22.97■■□□□ 1.27
PABPC1-221ENST00000522720 HDGFL2Q7Z4V5 671 aaPredicted RBP22.97■■□□□ 1.27
PABPC1-221ENST00000522720 TERF2IPQ9NYB0 399 aa22.97■■□□□ 1.27
PABPC1-221ENST00000522720 NINLQ9Y2I6 1382 aa22.96■■□□□ 1.27
PABPC1-221ENST00000522720 NRKQ7Z2Y5 1582 aa22.96■■□□□ 1.27
PABPC1-221ENST00000522720 CPDO75976 1380 aa22.95■■□□□ 1.26
PABPC1-221ENST00000522720 CHRNA2Q15822 529 aa22.95■■□□□ 1.26
PABPC1-221ENST00000522720 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
PABPC1-221ENST00000522720 GLI3P10071 1580 aa22.94■■□□□ 1.26
PABPC1-221ENST00000522720 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
PABPC1-221ENST00000522720 CCDC9Q9Y3X0 531 aaKnown RBP22.93■■□□□ 1.26
PABPC1-221ENST00000522720 SLIT3O75094 1523 aa22.92■■□□□ 1.26
PABPC1-221ENST00000522720 A0A1W2PP64 1363 aa22.92■■□□□ 1.26
PABPC1-221ENST00000522720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
PABPC1-221ENST00000522720 EDC4Q6P2E9 1401 aaKnown RBP22.91■■□□□ 1.26
PABPC1-221ENST00000522720 ONECUT3O60422 494 aaPredicted RBP22.89■■□□□ 1.25
PABPC1-221ENST00000522720 EIF4G2P78344 907 aaKnown RBP eCLIP22.89■■□□□ 1.25
PABPC1-221ENST00000522720 KCNH5Q8NCM2 988 aa22.89■■□□□ 1.25
PABPC1-221ENST00000522720 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
PABPC1-221ENST00000522720 SPATA31A5Q5VU36 1347 aa22.87■■□□□ 1.25
PABPC1-221ENST00000522720 SPATA31A7Q8IWB4 1347 aa22.87■■□□□ 1.25
PABPC1-221ENST00000522720 NME9Q86XW9 330 aa22.87■■□□□ 1.25
PABPC1-221ENST00000522720 ZRANB1Q9UGI0 708 aa22.87■■□□□ 1.25
PABPC1-221ENST00000522720 CAMTA1Q9Y6Y1 1673 aa22.87■■□□□ 1.25
PABPC1-221ENST00000522720 UPF1Q92900 1129 aaKnown RBP eCLIP22.86■■□□□ 1.25
PABPC1-221ENST00000522720 LMO7Q8WWI1 1683 aa22.86■■□□□ 1.25
PABPC1-221ENST00000522720 ANKRD36BQ8N2N9 1353 aa22.86■■□□□ 1.25
PABPC1-221ENST00000522720 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
PABPC1-221ENST00000522720 EVA1CP58658 441 aa22.85■■□□□ 1.25
PABPC1-221ENST00000522720 STRN4Q9NRL3 753 aa22.85■■□□□ 1.25
PABPC1-221ENST00000522720 AATKQ6ZMQ8 1374 aa22.85■■□□□ 1.25
PABPC1-221ENST00000522720 ARHGEF25Q86VW2 580 aa22.84■■□□□ 1.25
PABPC1-221ENST00000522720 SEPT12Q8IYM1 358 aa22.84■■□□□ 1.25
PABPC1-221ENST00000522720 USP54Q70EL1 1684 aa22.84■■□□□ 1.25
PABPC1-221ENST00000522720 ZBTB7CA1YPR0 619 aa22.82■■□□□ 1.24
PABPC1-221ENST00000522720 SOX12O15370 315 aa22.82■■□□□ 1.24
PABPC1-221ENST00000522720 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
PABPC1-221ENST00000522720 SPATA31A1Q5TZJ5 1347 aa22.82■■□□□ 1.24
PABPC1-221ENST00000522720 NFAT5O94916 1531 aa22.81■■□□□ 1.24
PABPC1-221ENST00000522720 COL18A1P39060 1754 aa22.81■■□□□ 1.24
PABPC1-221ENST00000522720 BRWD3Q6RI45 1802 aa22.8■■□□□ 1.24
PABPC1-221ENST00000522720 LARP1Q6PKG0 1096 aaKnown RBP22.8■■□□□ 1.24
PABPC1-221ENST00000522720 COL5A2P05997 1499 aaPredicted RBP22.79■■□□□ 1.24
PABPC1-221ENST00000522720 OVOS2A0A0J9YW53 1432 aa22.78■■□□□ 1.24
PABPC1-221ENST00000522720 OVOS2Q6IE36 1432 aa22.78■■□□□ 1.24
PABPC1-221ENST00000522720 AXIN2Q9Y2T1 843 aa22.78■■□□□ 1.24
PABPC1-221ENST00000522720 MYOM1P52179 1685 aa22.77■■□□□ 1.24
PABPC1-221ENST00000522720 A0A0G2JS52 829 aa22.76■■□□□ 1.23
PABPC1-221ENST00000522720 MYT1Q01538 1121 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms