RNA–Protein interactions for RNA: ENST00000522590.1

IPCEF1-213, Transcript of interaction protein for cytohesin exchange factors 1, humanhuman

TSL 2

Gene IPCEF1, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPCEF1-213ENST00000522590 TSHZ1Q6ZSZ6 1077 aa10.53□□□□□ -0.72
IPCEF1-213ENST00000522590 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
IPCEF1-213ENST00000522590 ZNF428Q96B54 188 aa10.53□□□□□ -0.72
IPCEF1-213ENST00000522590 NBPF4Q96M43 638 aa10.53□□□□□ -0.72
IPCEF1-213ENST00000522590 TSPYL1Q9H0U9 437 aa10.53□□□□□ -0.72
IPCEF1-213ENST00000522590 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
IPCEF1-213ENST00000522590 SCAF11Q99590 1463 aaKnown RBP10.53□□□□□ -0.72
IPCEF1-213ENST00000522590 ESPNB1AK53 854 aa10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 ARID4AP29374 1257 aaPredicted RBP10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 CCDC96Q2M329 555 aa10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 KIAA1211Q6ZU35 1233 aa10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 ROBO1Q9Y6N7 1651 aa10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 RINLQ6ZS11 566 aa10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 EXOC8Q8IYI6 725 aa10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 CGNQ9P2M7 1197 aaKnown RBP10.52□□□□□ -0.73
IPCEF1-213ENST00000522590 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
IPCEF1-213ENST00000522590 XIRP1Q702N8 1843 aaKnown RBP10.5□□□□□ -0.73
IPCEF1-213ENST00000522590 CEP83Q9Y592 693 aa10.5□□□□□ -0.73
IPCEF1-213ENST00000522590 CDK12Q9NYV4 1490 aaPredicted RBP10.5□□□□□ -0.73
IPCEF1-213ENST00000522590 RNF217Q8TC41 542 aa10.5□□□□□ -0.73
IPCEF1-213ENST00000522590 ZKSCAN8Q15776 578 aaPredicted RBP10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 SGSM3Q96HU1 749 aa10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 FAM13BQ9NYF5 915 aa10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 SPATA31A6Q5VVP1 1343 aa10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 LOC102724159A0A0B4J2E5 919 aa10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 PWP2Q15269 919 aaKnown RBP10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 RGL3Q3MIN7 710 aa10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 TRIM52Q96A61 297 aa10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 FYCO1Q9BQS8 1478 aa10.49□□□□□ -0.73
IPCEF1-213ENST00000522590 TMEM94Q12767 1356 aa10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 MBD5Q9P267 1494 aa10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 EP400NLQ6ZTU2 488 aa10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 EID1Q9Y6B2 187 aa10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 SLIT1O75093 1534 aa10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 ARHGAP23Q9P227 1491 aa10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 RXRBP28702 533 aa10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
IPCEF1-213ENST00000522590 FGD6Q6ZV73 1430 aa10.47□□□□□ -0.73
IPCEF1-213ENST00000522590 TXNDC2Q86VQ3 553 aa10.47□□□□□ -0.73
IPCEF1-213ENST00000522590 ERVK-7P63135 1459 aa10.47□□□□□ -0.73
IPCEF1-213ENST00000522590 MYCBPQ99417 103 aaPredicted RBP10.46□□□□□ -0.73
IPCEF1-213ENST00000522590 PHLPP1O60346 1717 aa10.46□□□□□ -0.73
IPCEF1-213ENST00000522590 SRCAPQ6ZRS2 3230 aa10.46□□□□□ -0.74
IPCEF1-213ENST00000522590 UBR1Q8IWV7 1749 aa10.46□□□□□ -0.74
IPCEF1-213ENST00000522590 KCNA6P17658 529 aa10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 TMC1Q8TDI8 760 aa10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 MAP3K1Q13233 1512 aa10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 MSH6P52701 1360 aa10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 CCDC172P0C7W6 258 aa10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 LTKP29376 864 aa10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 ZNF513Q8N8E2 541 aaPredicted RBP10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 STK26Q9P289 416 aa10.45□□□□□ -0.74
IPCEF1-213ENST00000522590 PROSER2Q86WR7 435 aaPredicted RBP10.44□□□□□ -0.74
IPCEF1-213ENST00000522590 NKTRP30414 1462 aaKnown RBP10.44□□□□□ -0.74
IPCEF1-213ENST00000522590 NCOA2Q15596 1464 aa10.44□□□□□ -0.74
IPCEF1-213ENST00000522590 CCDC141Q6ZP82 1450 aa10.44□□□□□ -0.74
IPCEF1-213ENST00000522590 NRDCO43847 1150 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 KCNJ4P48050 445 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 BRPF1P55201 1214 aaPredicted RBP10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 CT47A1Q5JQC4 288 aaPredicted RBP10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 ZBTB12Q9Y330 459 aaPredicted RBP10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 ABCC3O15438 1527 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 PRDM15P57071 1507 aaPredicted RBP10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 DYNC1I1O14576 645 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 MTA1Q13330 715 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 ARMCX6Q7L4S7 300 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 LRP6O75581 1613 aa10.43□□□□□ -0.74
IPCEF1-213ENST00000522590 OFD1O75665 1012 aa10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 MRVI1Q9Y6F6 885 aa10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 SETDB1Q15047 1291 aa10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 FOXD4L6Q3SYB3 417 aaPredicted RBP10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 FOXD4L3Q6VB84 417 aaPredicted RBP10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 ANKRD23Q86SG2 305 aa10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 NCAPGQ9BPX3 1015 aa10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 COL16A1Q07092 1604 aaPredicted RBP10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
IPCEF1-213ENST00000522590 MTUS2Q5JR59 1369 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 RAD21O60216 631 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 TIAM1Q13009 1591 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 CAMSAP2Q08AD1 1489 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 TULP2O00295 520 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 SPTY2D1Q68D10 685 aaPredicted RBP10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 TSPAN18Q96SJ8 248 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 TRIM34Q9BYJ4 488 aa10.41□□□□□ -0.74
IPCEF1-213ENST00000522590 RBM25P49756 843 aaKnown RBP10.4□□□□□ -0.74
IPCEF1-213ENST00000522590 HDAC1Q13547 482 aaPredicted RBP10.4□□□□□ -0.74
IPCEF1-213ENST00000522590 SIRT1Q96EB6 747 aa10.4□□□□□ -0.74
IPCEF1-213ENST00000522590 ZRANB1Q9UGI0 708 aa10.4□□□□□ -0.74
IPCEF1-213ENST00000522590 TMEM2Q9UHN6 1383 aa10.4□□□□□ -0.74
IPCEF1-213ENST00000522590 CCDC66A2RUB6 948 aa10.39□□□□□ -0.75
IPCEF1-213ENST00000522590 BORCS6Q96GS4 357 aa10.39□□□□□ -0.75
IPCEF1-213ENST00000522590 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms