RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 QRICH2Q9H0J4 1663 aa29.77■■■□□ 2.36
SDCBP-209ENST00000522243 CCDC61Q9Y6R9 512 aa29.77■■■□□ 2.36
SDCBP-209ENST00000522243 ACEP12821 1306 aa29.75■■■□□ 2.35
SDCBP-209ENST00000522243 SRPK2P78362 688 aaKnown RBP29.75■■■□□ 2.35
SDCBP-209ENST00000522243 CCDC9Q9Y3X0 531 aaKnown RBP29.75■■■□□ 2.35
SDCBP-209ENST00000522243 CRYBG1Q9Y4K1 1723 aa29.74■■■□□ 2.35
SDCBP-209ENST00000522243 CABP2Q9NPB3 220 aa29.73■■■□□ 2.35
SDCBP-209ENST00000522243 VPS72Q15906 364 aa29.72■■■□□ 2.35
SDCBP-209ENST00000522243 NBPF8Q3BBV2 869 aa29.72■■■□□ 2.35
SDCBP-209ENST00000522243 PLEKHG3A1L390 1219 aa29.71■■■□□ 2.35
SDCBP-209ENST00000522243 NUTM2GQ5VZR2 741 aa29.71■■■□□ 2.35
SDCBP-209ENST00000522243 POLR3AO14802 1390 aaPredicted RBP29.71■■■□□ 2.35
SDCBP-209ENST00000522243 BTG4Q9NY30 223 aa29.7■■■□□ 2.35
SDCBP-209ENST00000522243 ROCK2O75116 1388 aaKnown RBP29.69■■■□□ 2.34
SDCBP-209ENST00000522243 NRAPQ86VF7 1730 aa29.69■■■□□ 2.34
SDCBP-209ENST00000522243 COL14A1Q05707 1796 aaKnown RBP29.69■■■□□ 2.34
SDCBP-209ENST00000522243 PPIP5K1Q6PFW1 1433 aa29.68■■■□□ 2.34
SDCBP-209ENST00000522243 BRWD3Q6RI45 1802 aa29.68■■■□□ 2.34
SDCBP-209ENST00000522243 PHRF1Q9P1Y6 1649 aaKnown RBP29.65■■■□□ 2.34
SDCBP-209ENST00000522243 SEPT12Q8IYM1 358 aa29.65■■■□□ 2.34
SDCBP-209ENST00000522243 PRDM11Q9NQV5 511 aa29.64■■■□□ 2.34
SDCBP-209ENST00000522243 TRIM26Q12899 539 aaPredicted RBP29.62■■■□□ 2.33
SDCBP-209ENST00000522243 ZC3H6P61129 1189 aaKnown RBP29.61■■■□□ 2.33
SDCBP-209ENST00000522243 ABTB2Q8N961 1025 aa29.61■■■□□ 2.33
SDCBP-209ENST00000522243 KIAA0232Q92628 1395 aa29.61■■■□□ 2.33
SDCBP-209ENST00000522243 CHRNA2Q15822 529 aa29.6■■■□□ 2.33
SDCBP-209ENST00000522243 CABP1Q9NZU7 370 aa29.6■■■□□ 2.33
SDCBP-209ENST00000522243 A0A0G2JS52 829 aa29.59■■■□□ 2.33
SDCBP-209ENST00000522243 MYT1Q01538 1121 aa29.59■■■□□ 2.33
SDCBP-209ENST00000522243 EVC2Q86UK5 1308 aa29.59■■■□□ 2.33
SDCBP-209ENST00000522243 ONECUT3O60422 494 aaPredicted RBP29.58■■■□□ 2.33
SDCBP-209ENST00000522243 FAM98CQ17RN3 349 aaKnown RBP29.57■■■□□ 2.32
SDCBP-209ENST00000522243 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
SDCBP-209ENST00000522243 NRKQ7Z2Y5 1582 aa29.53■■■□□ 2.32
SDCBP-209ENST00000522243 KRT27Q7Z3Y8 459 aa29.53■■■□□ 2.32
SDCBP-209ENST00000522243 STRN4Q9NRL3 753 aa29.53■■■□□ 2.32
SDCBP-209ENST00000522243 SPATA31A5Q5VU36 1347 aa29.52■■■□□ 2.32
SDCBP-209ENST00000522243 SPATA31A7Q8IWB4 1347 aa29.52■■■□□ 2.32
SDCBP-209ENST00000522243 NLRP13Q86W25 1043 aa29.52■■■□□ 2.32
SDCBP-209ENST00000522243 CCDC125Q86Z20 511 aa29.52■■■□□ 2.32
SDCBP-209ENST00000522243 USP6P35125 1406 aa29.52■■■□□ 2.32
SDCBP-209ENST00000522243 CARD11Q9BXL7 1154 aa29.51■■■□□ 2.31
SDCBP-209ENST00000522243 USP19O94966 1318 aa29.5■■■□□ 2.31
SDCBP-209ENST00000522243 BRD4O60885 1362 aaPredicted RBP29.47■■■□□ 2.31
SDCBP-209ENST00000522243 BLMP54132 1417 aaPredicted RBP29.46■■■□□ 2.31
SDCBP-209ENST00000522243 GCP02774 474 aa29.45■■■□□ 2.31
SDCBP-209ENST00000522243 EVA1CP58658 441 aa29.45■■■□□ 2.31
SDCBP-209ENST00000522243 NLRP6P59044 892 aa29.45■■■□□ 2.31
SDCBP-209ENST00000522243 AKAP12Q02952 1782 aa29.44■■■□□ 2.3
SDCBP-209ENST00000522243 SPATA31A1Q5TZJ5 1347 aa29.44■■■□□ 2.3
SDCBP-209ENST00000522243 CAMTA1Q9Y6Y1 1673 aa29.44■■■□□ 2.3
SDCBP-209ENST00000522243 ZBTB7CA1YPR0 619 aa29.43■■■□□ 2.3
SDCBP-209ENST00000522243 USP35Q9P2H5 1018 aa29.43■■■□□ 2.3
SDCBP-209ENST00000522243 SSH2Q76I76 1423 aa29.43■■■□□ 2.3
SDCBP-209ENST00000522243 CPDO75976 1380 aa29.42■■■□□ 2.3
SDCBP-209ENST00000522243 THSD7AQ9UPZ6 1657 aa29.42■■■□□ 2.3
SDCBP-209ENST00000522243 DEFB132Q7Z7B7 95 aa29.42■■■□□ 2.3
SDCBP-209ENST00000522243 PIK3C2AO00443 1686 aa29.41■■■□□ 2.3
SDCBP-209ENST00000522243 LMO7Q8WWI1 1683 aa29.41■■■□□ 2.3
SDCBP-209ENST00000522243 SF3B2Q13435 895 aaKnown RBP29.41■■■□□ 2.3
SDCBP-209ENST00000522243 FAM182BQ5T319 152 aa29.41■■■□□ 2.3
SDCBP-209ENST00000522243 ZNF692Q9BU19 519 aaPredicted RBP29.39■■■□□ 2.3
SDCBP-209ENST00000522243 EP400Q96L91 3159 aa29.39■■■□□ 2.29
SDCBP-209ENST00000522243 SBNO2Q9Y2G9 1366 aa29.39■■■□□ 2.29
SDCBP-209ENST00000522243 LARP1Q6PKG0 1096 aaKnown RBP29.38■■■□□ 2.29
SDCBP-209ENST00000522243 TTC21BQ7Z4L5 1316 aa29.38■■■□□ 2.29
SDCBP-209ENST00000522243 SLIT3O75094 1523 aa29.37■■■□□ 2.29
SDCBP-209ENST00000522243 ZRANB1Q9UGI0 708 aa29.36■■■□□ 2.29
SDCBP-209ENST00000522243 CPSF1Q10570 1443 aaKnown RBP29.35■■■□□ 2.29
SDCBP-209ENST00000522243 KTN1Q86UP2 1357 aaKnown RBP29.34■■■□□ 2.29
SDCBP-209ENST00000522243 COL5A2P05997 1499 aaPredicted RBP29.32■■■□□ 2.28
SDCBP-209ENST00000522243 MON2Q7Z3U7 1717 aa29.31■■■□□ 2.28
SDCBP-209ENST00000522243 SOX12O15370 315 aa29.31■■■□□ 2.28
SDCBP-209ENST00000522243 TMC1Q8TDI8 760 aa29.31■■■□□ 2.28
SDCBP-209ENST00000522243 TTC21AQ8NDW8 1320 aa29.3■■■□□ 2.28
SDCBP-209ENST00000522243 BARGINQ6ZT62 677 aa29.3■■■□□ 2.28
SDCBP-209ENST00000522243 TCP11L2Q8N4U5 519 aa29.29■■■□□ 2.28
SDCBP-209ENST00000522243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.28■■■□□ 2.28
SDCBP-209ENST00000522243 COL18A1P39060 1754 aa29.28■■■□□ 2.28
SDCBP-209ENST00000522243 AATKQ6ZMQ8 1374 aa29.27■■■□□ 2.28
SDCBP-209ENST00000522243 BAG6P46379 1132 aa29.27■■■□□ 2.28
SDCBP-209ENST00000522243 SLC12A5Q9H2X9 1139 aa29.27■■■□□ 2.28
SDCBP-209ENST00000522243 RGPD1P0DJD0 1748 aa29.27■■■□□ 2.28
SDCBP-209ENST00000522243 CD163L1Q9NR16 1453 aa29.26■■■□□ 2.27
SDCBP-209ENST00000522243 ST20-MTHFSA0A0A6YYL1 179 aa29.25■■■□□ 2.27
SDCBP-209ENST00000522243 KCNH5Q8NCM2 988 aa29.25■■■□□ 2.27
SDCBP-209ENST00000522243 RGPD5Q99666 1765 aa29.24■■■□□ 2.27
SDCBP-209ENST00000522243 AXIN2Q9Y2T1 843 aa29.24■■■□□ 2.27
SDCBP-209ENST00000522243 CRB1P82279 1406 aa29.23■■■□□ 2.27
SDCBP-209ENST00000522243 PDE3BQ13370 1112 aa29.23■■■□□ 2.27
SDCBP-209ENST00000522243 ARHGEF25Q86VW2 580 aa29.23■■■□□ 2.27
SDCBP-209ENST00000522243 EN1Q05925 392 aaPredicted RBP29.22■■■□□ 2.27
SDCBP-209ENST00000522243 HDGFL2Q7Z4V5 671 aaPredicted RBP29.22■■■□□ 2.27
SDCBP-209ENST00000522243 NME9Q86XW9 330 aa29.22■■■□□ 2.27
SDCBP-209ENST00000522243 THRAP3Q9Y2W1 955 aaKnown RBP29.22■■■□□ 2.27
SDCBP-209ENST00000522243 TNS1Q9HBL0 1735 aaKnown RBP29.21■■■□□ 2.27
SDCBP-209ENST00000522243 FAM196AQ6ZSG2 479 aa29.21■■■□□ 2.27
SDCBP-209ENST00000522243 TOM1L2Q6ZVM7 507 aa29.21■■■□□ 2.27
SDCBP-209ENST00000522243 TESK2Q96S53 571 aa29.21■■■□□ 2.27
SDCBP-209ENST00000522243 TRIM37O94972 964 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 615.7 ms