RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
CNOT8-220ENST00000522139 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
CNOT8-220ENST00000522139 MAP10Q9P2G4 905 aa9.54□□□□□ -0.88
CNOT8-220ENST00000522139 F12P00748 615 aaPredicted RBP9.53□□□□□ -0.88
CNOT8-220ENST00000522139 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
CNOT8-220ENST00000522139 CTHP32929 405 aa9.52□□□□□ -0.89
CNOT8-220ENST00000522139 PNMA1Q8ND90 353 aa9.52□□□□□ -0.89
CNOT8-220ENST00000522139 ALG2Q9H553 416 aa9.51□□□□□ -0.89
CNOT8-220ENST00000522139 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
CNOT8-220ENST00000522139 RGS20O76081 388 aa9.5□□□□□ -0.89
CNOT8-220ENST00000522139 CCNYL3P0C7X3 344 aa9.5□□□□□ -0.89
CNOT8-220ENST00000522139 MMP16P51512 607 aa9.5□□□□□ -0.89
CNOT8-220ENST00000522139 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
CNOT8-220ENST00000522139 ADH1BP00325 375 aa9.49□□□□□ -0.89
CNOT8-220ENST00000522139 EVA1BQ9NVM1 165 aa9.49□□□□□ -0.89
CNOT8-220ENST00000522139 GGCXP38435 758 aa9.48□□□□□ -0.89
CNOT8-220ENST00000522139 FBXO45P0C2W1 286 aa9.47□□□□□ -0.89
CNOT8-220ENST00000522139 SOX11P35716 441 aa9.47□□□□□ -0.89
CNOT8-220ENST00000522139 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
CNOT8-220ENST00000522139 NR1H3Q13133 447 aa9.47□□□□□ -0.89
CNOT8-220ENST00000522139 NKX2-3Q8TAU0 364 aa9.47□□□□□ -0.89
CNOT8-220ENST00000522139 ZBBXA8MT70 800 aa9.46□□□□□ -0.9
CNOT8-220ENST00000522139 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
CNOT8-220ENST00000522139 ZC3H4Q9UPT8 1303 aaKnown RBP9.46□□□□□ -0.9
CNOT8-220ENST00000522139 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
CNOT8-220ENST00000522139 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
CNOT8-220ENST00000522139 SLC6A16Q9GZN6 736 aa9.45□□□□□ -0.9
CNOT8-220ENST00000522139 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
CNOT8-220ENST00000522139 PPP1R18Q6NYC8 613 aa9.44□□□□□ -0.9
CNOT8-220ENST00000522139 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
CNOT8-220ENST00000522139 RFX1P22670 979 aa9.43□□□□□ -0.9
CNOT8-220ENST00000522139 PTCRAQ6ISU1 281 aaPredicted RBP9.43□□□□□ -0.9
CNOT8-220ENST00000522139 UCN2Q96RP3 112 aa9.43□□□□□ -0.9
CNOT8-220ENST00000522139 PPP1R12CQ9BZL4 782 aa9.43□□□□□ -0.9
CNOT8-220ENST00000522139 SRPK2P78362 688 aaKnown RBP9.42□□□□□ -0.9
CNOT8-220ENST00000522139 CFAP70Q5T0N1 1121 aa9.42□□□□□ -0.9
CNOT8-220ENST00000522139 ARMC2Q8NEN0 867 aa9.42□□□□□ -0.9
CNOT8-220ENST00000522139 PALM3A6NDB9 673 aaPredicted RBP9.41□□□□□ -0.9
CNOT8-220ENST00000522139 S1PR4O95977 384 aa9.41□□□□□ -0.9
CNOT8-220ENST00000522139 UNC93B1Q9H1C4 597 aa9.41□□□□□ -0.9
CNOT8-220ENST00000522139 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
CNOT8-220ENST00000522139 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.9
CNOT8-220ENST00000522139 PTK2Q05397 1052 aa9.4□□□□□ -0.9
CNOT8-220ENST00000522139 NBPF14Q5TI25 921 aa9.4□□□□□ -0.9
CNOT8-220ENST00000522139 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
CNOT8-220ENST00000522139 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
CNOT8-220ENST00000522139 GPSM3Q9Y4H4 160 aa9.4□□□□□ -0.9
CNOT8-220ENST00000522139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
CNOT8-220ENST00000522139 OCSTAMPQ9BR26 566 aa9.39□□□□□ -0.91
CNOT8-220ENST00000522139 LMOD1P29536 600 aaPredicted RBP9.38□□□□□ -0.91
CNOT8-220ENST00000522139 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
CNOT8-220ENST00000522139 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
CNOT8-220ENST00000522139 ANKLE1Q8NAG6 615 aa9.37□□□□□ -0.91
CNOT8-220ENST00000522139 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
CNOT8-220ENST00000522139 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
CNOT8-220ENST00000522139 TRAIPQ9BWF2 469 aa9.37□□□□□ -0.91
CNOT8-220ENST00000522139 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
CNOT8-220ENST00000522139 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
CNOT8-220ENST00000522139 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
CNOT8-220ENST00000522139 PCDHB9Q9Y5E1 797 aa9.36□□□□□ -0.91
CNOT8-220ENST00000522139 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
CNOT8-220ENST00000522139 ADAM32Q8TC27 787 aa9.35□□□□□ -0.91
CNOT8-220ENST00000522139 BAP1Q92560 729 aa9.35□□□□□ -0.91
CNOT8-220ENST00000522139 ARHGAP9Q9BRR9 750 aa9.35□□□□□ -0.91
CNOT8-220ENST00000522139 NISCHQ9Y2I1 1504 aa9.35□□□□□ -0.91
CNOT8-220ENST00000522139 PPEF1O14829 653 aaPredicted RBP9.34□□□□□ -0.91
CNOT8-220ENST00000522139 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
CNOT8-220ENST00000522139 CDCA8Q53HL2 280 aa9.34□□□□□ -0.91
CNOT8-220ENST00000522139 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
CNOT8-220ENST00000522139 V9GY48 417 aaPredicted RBP9.34□□□□□ -0.91
CNOT8-220ENST00000522139 ATP9BO43861 1147 aa9.33□□□□□ -0.92
CNOT8-220ENST00000522139 LINC01559Q495D7 138 aa9.33□□□□□ -0.92
CNOT8-220ENST00000522139 ZBTB33Q86T24 672 aa9.33□□□□□ -0.92
CNOT8-220ENST00000522139 PRKD2Q9BZL6 878 aa9.33□□□□□ -0.92
CNOT8-220ENST00000522139 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
CNOT8-220ENST00000522139 MAGEB6P1A0A0J9YX57 407 aa9.32□□□□□ -0.92
CNOT8-220ENST00000522139 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
CNOT8-220ENST00000522139 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
CNOT8-220ENST00000522139 FAM174AQ8TBP5 190 aa9.32□□□□□ -0.92
CNOT8-220ENST00000522139 FOXJ1Q92949 421 aa9.32□□□□□ -0.92
CNOT8-220ENST00000522139 CARD14Q9BXL6 1004 aa9.32□□□□□ -0.92
CNOT8-220ENST00000522139 SKIP12755 728 aa9.31□□□□□ -0.92
CNOT8-220ENST00000522139 AGERQ15109 404 aa9.31□□□□□ -0.92
CNOT8-220ENST00000522139 SH3RF1Q7Z6J0 888 aa9.3□□□□□ -0.92
CNOT8-220ENST00000522139 ZNF511Q8NB15 262 aa9.3□□□□□ -0.92
CNOT8-220ENST00000522139 ZNF592Q92610 1267 aa9.3□□□□□ -0.92
CNOT8-220ENST00000522139 SLFNL1Q499Z3 407 aa9.29□□□□□ -0.92
CNOT8-220ENST00000522139 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
CNOT8-220ENST00000522139 DZIP3Q86Y13 1208 aaKnown RBP9.29□□□□□ -0.92
CNOT8-220ENST00000522139 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
CNOT8-220ENST00000522139 BPHLQ86WA6 291 aaPredicted RBP9.28□□□□□ -0.92
CNOT8-220ENST00000522139 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
CNOT8-220ENST00000522139 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
CNOT8-220ENST00000522139 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
CNOT8-220ENST00000522139 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 SLC19A1P41440 591 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 SH3BP2P78314 561 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms