RNA–Protein interactions for RNA: ENST00000522039.1

HR-208, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 4

Gene HR, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-208ENST00000522039 ACEP12821 1306 aa24.69■■□□□ 1.54
HR-208ENST00000522039 QTRT2Q9H974 415 aaKnown RBP24.68■■□□□ 1.54
HR-208ENST00000522039 CABP2Q9NPB3 220 aa24.68■■□□□ 1.54
HR-208ENST00000522039 SLIT2O94813 1529 aa24.67■■□□□ 1.54
HR-208ENST00000522039 RBM6P78332 1123 aaKnown RBP24.67■■□□□ 1.54
HR-208ENST00000522039 TRPC5Q9UL62 973 aaPredicted RBP24.67■■□□□ 1.54
HR-208ENST00000522039 ATRNO75882 1429 aa24.67■■□□□ 1.54
HR-208ENST00000522039 BCL9LQ86UU0 1499 aa24.66■■□□□ 1.54
HR-208ENST00000522039 PHRF1Q9P1Y6 1649 aaKnown RBP24.66■■□□□ 1.54
HR-208ENST00000522039 PAK3O75914 559 aaPredicted RBP24.66■■□□□ 1.54
HR-208ENST00000522039 BRD4O60885 1362 aaPredicted RBP24.66■■□□□ 1.54
HR-208ENST00000522039 CABLES1Q8TDN4 633 aa24.65■■□□□ 1.54
HR-208ENST00000522039 TIMELESSQ9UNS1 1208 aa24.65■■□□□ 1.54
HR-208ENST00000522039 COL14A1Q05707 1796 aaKnown RBP24.63■■□□□ 1.53
HR-208ENST00000522039 ATAD2Q6PL18 1390 aa24.63■■□□□ 1.53
HR-208ENST00000522039 AKAP12Q02952 1782 aa24.62■■□□□ 1.53
HR-208ENST00000522039 RGS12O14924 1447 aa24.61■■□□□ 1.53
HR-208ENST00000522039 USP6P35125 1406 aa24.6■■□□□ 1.53
HR-208ENST00000522039 NRAPQ86VF7 1730 aa24.59■■□□□ 1.53
HR-208ENST00000522039 PLEKHG5O94827 1062 aa24.59■■□□□ 1.53
HR-208ENST00000522039 UNC5CLQ8IV45 518 aa24.59■■□□□ 1.53
HR-208ENST00000522039 CABP1Q9NZU7 370 aa24.59■■□□□ 1.53
HR-208ENST00000522039 NRKQ7Z2Y5 1582 aa24.56■■□□□ 1.52
HR-208ENST00000522039 MON2Q7Z3U7 1717 aa24.55■■□□□ 1.52
HR-208ENST00000522039 SLC24A1O60721 1099 aa24.54■■□□□ 1.52
HR-208ENST00000522039 GLI3P10071 1580 aa24.54■■□□□ 1.52
HR-208ENST00000522039 ABTB2Q8N961 1025 aa24.53■■□□□ 1.52
HR-208ENST00000522039 GJD4Q96KN9 370 aaPredicted RBP24.53■■□□□ 1.52
HR-208ENST00000522039 ZNF692Q9BU19 519 aaPredicted RBP24.53■■□□□ 1.52
HR-208ENST00000522039 SSH2Q76I76 1423 aa24.52■■□□□ 1.52
HR-208ENST00000522039 FAM83GA6ND36 823 aa24.52■■□□□ 1.52
HR-208ENST00000522039 USP19O94966 1318 aa24.52■■□□□ 1.52
HR-208ENST00000522039 PIK3C2AO00443 1686 aa24.52■■□□□ 1.52
HR-208ENST00000522039 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.52
HR-208ENST00000522039 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
HR-208ENST00000522039 PUS7Q96PZ0 661 aaKnown RBP24.51■■□□□ 1.51
HR-208ENST00000522039 VPS72Q15906 364 aa24.5■■□□□ 1.51
HR-208ENST00000522039 NLRP13Q86W25 1043 aa24.5■■□□□ 1.51
HR-208ENST00000522039 NUTM2GQ5VZR2 741 aa24.49■■□□□ 1.51
HR-208ENST00000522039 PRDM11Q9NQV5 511 aa24.49■■□□□ 1.51
HR-208ENST00000522039 USP47Q96K76 1375 aa24.49■■□□□ 1.51
HR-208ENST00000522039 ST20-MTHFSA0A0A6YYL1 179 aa24.48■■□□□ 1.51
HR-208ENST00000522039 SLIT3O75094 1523 aa24.48■■□□□ 1.51
HR-208ENST00000522039 KIAA0232Q92628 1395 aa24.48■■□□□ 1.51
HR-208ENST00000522039 CPDO75976 1380 aa24.47■■□□□ 1.51
HR-208ENST00000522039 TESK2Q96S53 571 aa24.47■■□□□ 1.51
HR-208ENST00000522039 BTG4Q9NY30 223 aa24.47■■□□□ 1.51
HR-208ENST00000522039 KTN1Q86UP2 1357 aaKnown RBP24.46■■□□□ 1.51
HR-208ENST00000522039 NINLQ9Y2I6 1382 aa24.46■■□□□ 1.51
HR-208ENST00000522039 TTC21AQ8NDW8 1320 aa24.46■■□□□ 1.51
HR-208ENST00000522039 LMO7Q8WWI1 1683 aa24.44■■□□□ 1.5
HR-208ENST00000522039 CD163L1Q9NR16 1453 aa24.44■■□□□ 1.5
HR-208ENST00000522039 USP54Q70EL1 1684 aa24.43■■□□□ 1.5
HR-208ENST00000522039 TTC21BQ7Z4L5 1316 aa24.43■■□□□ 1.5
HR-208ENST00000522039 CCDC9Q9Y3X0 531 aaKnown RBP24.43■■□□□ 1.5
HR-208ENST00000522039 NLRP6P59044 892 aa24.42■■□□□ 1.5
HR-208ENST00000522039 ZC3H6P61129 1189 aaKnown RBP24.42■■□□□ 1.5
HR-208ENST00000522039 GCP02774 474 aa24.41■■□□□ 1.5
HR-208ENST00000522039 UPF1Q92900 1129 aaKnown RBP eCLIP24.41■■□□□ 1.5
HR-208ENST00000522039 BRWD3Q6RI45 1802 aa24.4■■□□□ 1.5
HR-208ENST00000522039 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
HR-208ENST00000522039 TMC1Q8TDI8 760 aa24.4■■□□□ 1.5
HR-208ENST00000522039 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.49
HR-208ENST00000522039 EDC4Q6P2E9 1401 aaKnown RBP24.38■■□□□ 1.49
HR-208ENST00000522039 TMF1P82094 1093 aa24.38■■□□□ 1.49
HR-208ENST00000522039 CHRNA2Q15822 529 aa24.38■■□□□ 1.49
HR-208ENST00000522039 ONECUT3O60422 494 aaPredicted RBP24.37■■□□□ 1.49
HR-208ENST00000522039 CAMTA1Q9Y6Y1 1673 aa24.37■■□□□ 1.49
HR-208ENST00000522039 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
HR-208ENST00000522039 A0A1W2PP64 1363 aa24.36■■□□□ 1.49
HR-208ENST00000522039 SPATA31A5Q5VU36 1347 aa24.35■■□□□ 1.49
HR-208ENST00000522039 SPATA31A7Q8IWB4 1347 aa24.35■■□□□ 1.49
HR-208ENST00000522039 KCNH5Q8NCM2 988 aa24.35■■□□□ 1.49
HR-208ENST00000522039 THSD7AQ9UPZ6 1657 aa24.34■■□□□ 1.49
HR-208ENST00000522039 CDCA8Q53HL2 280 aa24.34■■□□□ 1.49
HR-208ENST00000522039 AATKQ6ZMQ8 1374 aa24.33■■□□□ 1.49
HR-208ENST00000522039 USP31Q70CQ4 1352 aa24.33■■□□□ 1.49
HR-208ENST00000522039 SEPT12Q8IYM1 358 aa24.33■■□□□ 1.49
HR-208ENST00000522039 NFAT5O94916 1531 aa24.33■■□□□ 1.49
HR-208ENST00000522039 ABCC6O95255 1503 aa24.33■■□□□ 1.49
HR-208ENST00000522039 COL18A1P39060 1754 aa24.32■■□□□ 1.48
HR-208ENST00000522039 COL5A2P05997 1499 aaPredicted RBP24.32■■□□□ 1.48
HR-208ENST00000522039 STRN4Q9NRL3 753 aa24.31■■□□□ 1.48
HR-208ENST00000522039 SPATA31A1Q5TZJ5 1347 aa24.31■■□□□ 1.48
HR-208ENST00000522039 ANKRD36BQ8N2N9 1353 aa24.3■■□□□ 1.48
HR-208ENST00000522039 EVA1CP58658 441 aa24.3■■□□□ 1.48
HR-208ENST00000522039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.3■■□□□ 1.48
HR-208ENST00000522039 FAM98CQ17RN3 349 aaKnown RBP24.29■■□□□ 1.48
HR-208ENST00000522039 MYOM1P52179 1685 aa24.28■■□□□ 1.48
HR-208ENST00000522039 A0A0G2JS52 829 aa24.28■■□□□ 1.48
HR-208ENST00000522039 MYT1Q01538 1121 aa24.28■■□□□ 1.48
HR-208ENST00000522039 LTN1O94822 1766 aa24.26■■□□□ 1.47
HR-208ENST00000522039 NME9Q86XW9 330 aa24.26■■□□□ 1.47
HR-208ENST00000522039 OVOS2A0A0J9YW53 1432 aa24.26■■□□□ 1.47
HR-208ENST00000522039 OVOS2Q6IE36 1432 aa24.26■■□□□ 1.47
HR-208ENST00000522039 KRT27Q7Z3Y8 459 aa24.25■■□□□ 1.47
HR-208ENST00000522039 ARHGEF25Q86VW2 580 aa24.25■■□□□ 1.47
HR-208ENST00000522039 CCDC125Q86Z20 511 aa24.25■■□□□ 1.47
HR-208ENST00000522039 CRB1P82279 1406 aa24.25■■□□□ 1.47
HR-208ENST00000522039 RGPD5Q99666 1765 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms