RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 KRI1Q8N9T8 703 aaKnown RBP13.6□□□□□ -0.23
LAMA4-219ENST00000522006 TBC1D2BQ9UPU7 963 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 PTPRGP23470 1445 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 HIP1O00291 1037 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 LEKR1Q6ZMV7 388 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
LAMA4-219ENST00000522006 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 GNAI3P08754 354 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
LAMA4-219ENST00000522006 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
LAMA4-219ENST00000522006 IKQ13123 557 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-219ENST00000522006 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
LAMA4-219ENST00000522006 AXDND1Q5T1B0 1012 aaPredicted RBP13.59□□□□□ -0.23
LAMA4-219ENST00000522006 PKNOX2Q96KN3 472 aa13.59□□□□□ -0.23
LAMA4-219ENST00000522006 PDCP20941 246 aa13.58□□□□□ -0.23
LAMA4-219ENST00000522006 STK38Q15208 465 aa13.58□□□□□ -0.23
LAMA4-219ENST00000522006 TXLNAP40222 546 aa13.58□□□□□ -0.24
LAMA4-219ENST00000522006 GCC1Q96CN9 775 aa13.58□□□□□ -0.24
LAMA4-219ENST00000522006 NOB1Q9ULX3 412 aaKnown RBP13.58□□□□□ -0.24
LAMA4-219ENST00000522006 MTHFSP49914 203 aa13.57□□□□□ -0.24
LAMA4-219ENST00000522006 TSPYL1Q9H0U9 437 aa13.57□□□□□ -0.24
LAMA4-219ENST00000522006 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
LAMA4-219ENST00000522006 TCP11L2Q8N4U5 519 aa13.57□□□□□ -0.24
LAMA4-219ENST00000522006 SERPINC1P01008 464 aa13.57□□□□□ -0.24
LAMA4-219ENST00000522006 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
LAMA4-219ENST00000522006 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
LAMA4-219ENST00000522006 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
LAMA4-219ENST00000522006 TTC39AQ5SRH9 613 aa13.57□□□□□ -0.24
LAMA4-219ENST00000522006 ERC1Q8IUD2 1116 aa13.56□□□□□ -0.24
LAMA4-219ENST00000522006 STK3Q13188 491 aa13.56□□□□□ -0.24
LAMA4-219ENST00000522006 WASHC2AQ641Q2 1341 aa13.56□□□□□ -0.24
LAMA4-219ENST00000522006 SYCP1Q15431 976 aa13.56□□□□□ -0.24
LAMA4-219ENST00000522006 CCDC192P0DO97 292 aa13.55□□□□□ -0.24
LAMA4-219ENST00000522006 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
LAMA4-219ENST00000522006 CCAR1Q8IX12 1150 aaKnown RBP13.55□□□□□ -0.24
LAMA4-219ENST00000522006 GNAI2P04899 355 aa13.55□□□□□ -0.24
LAMA4-219ENST00000522006 KRT18P05783 430 aaKnown RBP13.55□□□□□ -0.24
LAMA4-219ENST00000522006 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
LAMA4-219ENST00000522006 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
LAMA4-219ENST00000522006 TNMDQ9H2S6 317 aa13.55□□□□□ -0.24
LAMA4-219ENST00000522006 TMEM132AQ24JP5 1023 aa13.55□□□□□ -0.24
LAMA4-219ENST00000522006 TWISTNBQ3B726 338 aaPredicted RBP13.55□□□□□ -0.24
LAMA4-219ENST00000522006 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
LAMA4-219ENST00000522006 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
LAMA4-219ENST00000522006 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
LAMA4-219ENST00000522006 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
LAMA4-219ENST00000522006 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
LAMA4-219ENST00000522006 ZNHIT6Q9NWK9 470 aaKnown RBP13.54□□□□□ -0.24
LAMA4-219ENST00000522006 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
LAMA4-219ENST00000522006 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
LAMA4-219ENST00000522006 TMEM132EQ6IEE7 984 aa13.54□□□□□ -0.24
LAMA4-219ENST00000522006 ERLIN2O94905 339 aa13.54□□□□□ -0.24
LAMA4-219ENST00000522006 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
LAMA4-219ENST00000522006 PLCD4Q9BRC7 762 aa13.54□□□□□ -0.24
LAMA4-219ENST00000522006 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
LAMA4-219ENST00000522006 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
LAMA4-219ENST00000522006 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
LAMA4-219ENST00000522006 PPFIBP1Q86W92 1011 aa13.53□□□□□ -0.24
LAMA4-219ENST00000522006 GOLGA6L10A6NI86 522 aa13.53□□□□□ -0.24
LAMA4-219ENST00000522006 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
LAMA4-219ENST00000522006 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
LAMA4-219ENST00000522006 DACH1Q9UI36 760 aa13.53□□□□□ -0.24
LAMA4-219ENST00000522006 ATF3P18847 181 aa13.52□□□□□ -0.24
LAMA4-219ENST00000522006 NLRP6P59044 892 aa13.52□□□□□ -0.24
LAMA4-219ENST00000522006 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.24
LAMA4-219ENST00000522006 STAC3Q96MF2 364 aa13.52□□□□□ -0.24
LAMA4-219ENST00000522006 MPNDQ8N594 471 aa13.52□□□□□ -0.25
LAMA4-219ENST00000522006 JMYQ8N9B5 988 aa13.52□□□□□ -0.25
LAMA4-219ENST00000522006 ZNF644Q9H582 1327 aaPredicted RBP13.52□□□□□ -0.25
LAMA4-219ENST00000522006 BCAR3O75815 825 aa13.52□□□□□ -0.25
LAMA4-219ENST00000522006 CCDC181Q5TID7 509 aa13.52□□□□□ -0.25
LAMA4-219ENST00000522006 WDR33Q9C0J8 1336 aaKnown RBP13.52□□□□□ -0.25
LAMA4-219ENST00000522006 AKNAQ7Z591 1439 aa13.52□□□□□ -0.25
LAMA4-219ENST00000522006 ANKRD1Q15327 319 aa13.52□□□□□ -0.25
LAMA4-219ENST00000522006 CCDC112Q8NEF3 446 aa13.52□□□□□ -0.25
LAMA4-219ENST00000522006 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
LAMA4-219ENST00000522006 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 UQCRHLA0A096LP55 91 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 UQCRHP07919 91 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 ME1P48163 572 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 DHX8Q14562 1220 aaKnown RBP13.51□□□□□ -0.25
LAMA4-219ENST00000522006 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 LRRCC1Q9C099 1032 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 FANCD2Q9BXW9 1451 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 NEFHP12036 1026 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
LAMA4-219ENST00000522006 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.51□□□□□ -0.25
LAMA4-219ENST00000522006 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
LAMA4-219ENST00000522006 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
LAMA4-219ENST00000522006 HSP90AB3PQ58FF7 597 aa13.5□□□□□ -0.25
LAMA4-219ENST00000522006 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-219ENST00000522006 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
LAMA4-219ENST00000522006 KIAA0754O94854 1291 aa13.5□□□□□ -0.25
LAMA4-219ENST00000522006 CCDC69A6NI79 296 aa13.5□□□□□ -0.25
LAMA4-219ENST00000522006 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
LAMA4-219ENST00000522006 TANGO6Q9C0B7 1094 aa13.5□□□□□ -0.25
LAMA4-219ENST00000522006 CBFA2T2O43439 604 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1272.8 ms