RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	POTEI	P0CG38	1075 aa		11.29	□□□□□ -0.6
SPIDR-215	ENST00000521798	PNMA1	Q8ND90	353 aa		11.29	□□□□□ -0.6
SPIDR-215	ENST00000521798	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIDR-215	ENST00000521798	NR6A1	Q15406	480 aa		11.28	□□□□□ -0.6
SPIDR-215	ENST00000521798	GRIPAP1	Q4V328	841 aa		11.28	□□□□□ -0.6
SPIDR-215	ENST00000521798	SWT1	Q5T5J6	900 aa	Known RBP	11.28	□□□□□ -0.6
SPIDR-215	ENST00000521798	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
SPIDR-215	ENST00000521798	ELOA	Q14241	798 aa	Known RBP	11.27	□□□□□ -0.61
SPIDR-215	ENST00000521798	PBRM1	Q86U86	1689 aa		11.27	□□□□□ -0.61
SPIDR-215	ENST00000521798	LOC105371045	A0A1W2PR82	267 aa		11.26	□□□□□ -0.61
SPIDR-215	ENST00000521798	CHD1	O14646	1710 aa		11.25	□□□□□ -0.61
SPIDR-215	ENST00000521798	FUT2	Q10981	343 aa		11.24	□□□□□ -0.61
SPIDR-215	ENST00000521798	KANK4	Q5T7N3	995 aa	Predicted RBP	11.24	□□□□□ -0.61
SPIDR-215	ENST00000521798	KIAA1468	Q9P260	1216 aa		11.24	□□□□□ -0.61
SPIDR-215	ENST00000521798	SYNJ2	O15056	1496 aa		11.24	□□□□□ -0.61
SPIDR-215	ENST00000521798	ERICH3	Q5RHP9	1530 aa		11.23	□□□□□ -0.61
SPIDR-215	ENST00000521798	PER1	O15534	1290 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-215	ENST00000521798	NR1H3	Q13133	447 aa		11.22	□□□□□ -0.61
SPIDR-215	ENST00000521798	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.22	□□□□□ -0.61
SPIDR-215	ENST00000521798	KCNK17	Q96T54	332 aa		11.22	□□□□□ -0.61
SPIDR-215	ENST00000521798	ZMIZ1	Q9ULJ6	1067 aa		11.22	□□□□□ -0.61
SPIDR-215	ENST00000521798	ADAMTS12	P58397	1594 aa		11.21	□□□□□ -0.61
SPIDR-215	ENST00000521798	TMEM164	Q5U3C3	297 aa		11.21	□□□□□ -0.61
SPIDR-215	ENST00000521798	NFATC2IP	Q8NCF5	419 aa		11.21	□□□□□ -0.61
SPIDR-215	ENST00000521798	SYMPK	Q92797	1274 aa	Known RBP	11.21	□□□□□ -0.61
SPIDR-215	ENST00000521798	KIF27	Q86VH2	1401 aa		11.2	□□□□□ -0.62
SPIDR-215	ENST00000521798	SLC4A3	P48751	1232 aa		11.2	□□□□□ -0.62
SPIDR-215	ENST00000521798	TXNDC2	Q86VQ3	553 aa		11.2	□□□□□ -0.62
SPIDR-215	ENST00000521798	CCER1	Q8TC90	406 aa	Predicted RBP	11.2	□□□□□ -0.62
SPIDR-215	ENST00000521798	ZBED2	Q9BTP6	218 aa		11.2	□□□□□ -0.62
SPIDR-215	ENST00000521798	FHAD1	B1AJZ9	1412 aa		11.19	□□□□□ -0.62
SPIDR-215	ENST00000521798	ATP6V1A	P38606	617 aa		11.19	□□□□□ -0.62
SPIDR-215	ENST00000521798	RETREG3	Q86VR2	466 aa		11.19	□□□□□ -0.62
SPIDR-215	ENST00000521798	STK32A	Q8WU08	396 aa		11.19	□□□□□ -0.62
SPIDR-215	ENST00000521798	KCNH8	Q96L42	1107 aa		11.19	□□□□□ -0.62
SPIDR-215	ENST00000521798	MYT1L	Q9UL68	1186 aa		11.19	□□□□□ -0.62
SPIDR-215	ENST00000521798	IGF1R	P08069	1367 aa		11.18	□□□□□ -0.62
SPIDR-215	ENST00000521798	CFH	P08603	1231 aa		11.18	□□□□□ -0.62
SPIDR-215	ENST00000521798	DESI1	Q6ICB0	168 aa		11.18	□□□□□ -0.62
SPIDR-215	ENST00000521798	NOVA2	Q9UNW9	492 aa	Known RBP	11.18	□□□□□ -0.62
SPIDR-215	ENST00000521798	GRIN2A	Q12879	1464 aa		11.18	□□□□□ -0.62
SPIDR-215	ENST00000521798	PIK3CD	O00329	1044 aa		11.17	□□□□□ -0.62
SPIDR-215	ENST00000521798	HDGF	P51858	240 aa	Known RBP	11.17	□□□□□ -0.62
SPIDR-215	ENST00000521798	CLASP1	Q7Z460	1538 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	RBM47	A0AV96	593 aa	Known RBP	11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	USP17L3	A6NCW0	530 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	USP17L4	A6NCW7	530 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	FBXO45	P0C2W1	286 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	PHLDB3	Q6NSJ2	640 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	USP17L2	Q6R6M4	530 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	USP17L1	Q7RTZ2	530 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	PLEKHM2	Q8IWE5	1019 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	RABGEF1	Q9UJ41	708 aa		11.16	□□□□□ -0.62
SPIDR-215	ENST00000521798	UNCX	A6NJT0	531 aa		11.15	□□□□□ -0.62
SPIDR-215	ENST00000521798	ZBBX	A8MT70	800 aa		11.14	□□□□□ -0.63
SPIDR-215	ENST00000521798	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.14	□□□□□ -0.63
SPIDR-215	ENST00000521798	NUP160	Q12769	1436 aa		11.14	□□□□□ -0.63
SPIDR-215	ENST00000521798	FAM196B	A6NMK8	535 aa		11.13	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L5	A8MUK1	530 aa		11.13	□□□□□ -0.63
SPIDR-215	ENST00000521798	LYPD8	Q6UX82	237 aa		11.13	□□□□□ -0.63
SPIDR-215	ENST00000521798	ARHGEF11	O15085	1522 aa		11.13	□□□□□ -0.63
SPIDR-215	ENST00000521798	RUSC2	Q8N2Y8	1516 aa		11.13	□□□□□ -0.63
SPIDR-215	ENST00000521798	CEP170	Q5SW79	1584 aa		11.12	□□□□□ -0.63
SPIDR-215	ENST00000521798	ERCC3	P19447	782 aa		11.12	□□□□□ -0.63
SPIDR-215	ENST00000521798	FAM98C	Q17RN3	349 aa	Known RBP	11.12	□□□□□ -0.63
SPIDR-215	ENST00000521798	RIMBP3C	A6NJZ7	1639 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	RIMBP3B	A6NNM3	1639 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	RIMBP3	Q9UFD9	1639 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L15	C9J2P7	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L10	C9JJH3	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L13	C9JLJ4	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L12	C9JPN9	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L11	C9JVI0	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L21	D6R901	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L18	D6R9N7	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L22	D6RA61	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L17	D6RBQ6	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L19	D6RCP7	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L20	D6RJB6	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	SKI	P12755	728 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	HOXB1	P14653	301 aa	Predicted RBP	11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	SSFA2	P28290	1259 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	ARID4A	P29374	1257 aa	Predicted RBP	11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	USP17L24	Q0WX57	530 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	FKBPL	Q9UIM3	349 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	CUL7	Q14999	1698 aa		11.11	□□□□□ -0.63
SPIDR-215	ENST00000521798	POTEJ	P0CG39	1038 aa		11.1	□□□□□ -0.63
SPIDR-215	ENST00000521798		Q3C1V9	767 aa		11.1	□□□□□ -0.63
SPIDR-215	ENST00000521798	KMT5B	Q4FZB7	885 aa		11.1	□□□□□ -0.63
SPIDR-215	ENST00000521798	MORN1	Q5T089	497 aa		11.1	□□□□□ -0.63
SPIDR-215	ENST00000521798	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-215	ENST00000521798	CARMIL1	Q5VZK9	1371 aa		11.1	□□□□□ -0.63
SPIDR-215	ENST00000521798	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-215	ENST00000521798	CRTC2	Q53ET0	693 aa	Predicted RBP	11.09	□□□□□ -0.63
SPIDR-215	ENST00000521798	SAMD7	Q7Z3H4	446 aa		11.09	□□□□□ -0.63
SPIDR-215	ENST00000521798	FAM174A	Q8TBP5	190 aa		11.09	□□□□□ -0.63
SPIDR-215	ENST00000521798	SLC4A5	Q9BY07	1137 aa		11.09	□□□□□ -0.63
SPIDR-215	ENST00000521798	IGSF5	Q9NSI5	407 aa		11.09	□□□□□ -0.63
SPIDR-215	ENST00000521798	SLAIN2	Q9P270	581 aa		11.08	□□□□□ -0.64
SPIDR-215	ENST00000521798	CLP1	Q92989	425 aa	Known RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms