RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 DISP2A7MBM2 1401 aa13.38□□□□□ -0.27
MRPS28-207ENST00000521434 PIK3C2GO75747 1445 aa13.38□□□□□ -0.27
MRPS28-207ENST00000521434 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-207ENST00000521434 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
MRPS28-207ENST00000521434 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
MRPS28-207ENST00000521434 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
MRPS28-207ENST00000521434 THSD7AQ9UPZ6 1657 aa13.36□□□□□ -0.27
MRPS28-207ENST00000521434 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
MRPS28-207ENST00000521434 FAM182BQ5T319 152 aa13.35□□□□□ -0.27
MRPS28-207ENST00000521434 ADGRB2O60241 1585 aa13.35□□□□□ -0.27
MRPS28-207ENST00000521434 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
MRPS28-207ENST00000521434 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
MRPS28-207ENST00000521434 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
MRPS28-207ENST00000521434 EZH2Q15910 746 aaKnown RBP13.33□□□□□ -0.28
MRPS28-207ENST00000521434 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
MRPS28-207ENST00000521434 YY1P25490 414 aa13.32□□□□□ -0.28
MRPS28-207ENST00000521434 PMFBP1Q8TBY8 1022 aa13.32□□□□□ -0.28
MRPS28-207ENST00000521434 CRYBG1Q9Y4K1 1723 aa13.32□□□□□ -0.28
MRPS28-207ENST00000521434 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
MRPS28-207ENST00000521434 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
MRPS28-207ENST00000521434 C14orf93Q9H972 538 aaKnown RBP13.31□□□□□ -0.28
MRPS28-207ENST00000521434 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
MRPS28-207ENST00000521434 TRIM37O94972 964 aa13.3□□□□□ -0.28
MRPS28-207ENST00000521434 SAFB2Q14151 953 aaKnown RBP eCLIP13.3□□□□□ -0.28
MRPS28-207ENST00000521434 FAM196AQ6ZSG2 479 aa13.3□□□□□ -0.28
MRPS28-207ENST00000521434 PRAM1Q96QH2 718 aa13.3□□□□□ -0.28
MRPS28-207ENST00000521434 RREB1Q92766 1687 aa13.3□□□□□ -0.28
MRPS28-207ENST00000521434 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
MRPS28-207ENST00000521434 NUP188Q5SRE5 1749 aa13.28□□□□□ -0.28
MRPS28-207ENST00000521434 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
MRPS28-207ENST00000521434 APBA3O96018 575 aa13.27□□□□□ -0.29
MRPS28-207ENST00000521434 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
MRPS28-207ENST00000521434 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.29
MRPS28-207ENST00000521434 POGKQ9P215 609 aa13.27□□□□□ -0.29
MRPS28-207ENST00000521434 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
MRPS28-207ENST00000521434 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
MRPS28-207ENST00000521434 EIF3AQ14152 1382 aaKnown RBP13.25□□□□□ -0.29
MRPS28-207ENST00000521434 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
MRPS28-207ENST00000521434 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
MRPS28-207ENST00000521434 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
MRPS28-207ENST00000521434 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
MRPS28-207ENST00000521434 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
MRPS28-207ENST00000521434 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
MRPS28-207ENST00000521434 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
MRPS28-207ENST00000521434 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-207ENST00000521434 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-207ENST00000521434 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
MRPS28-207ENST00000521434 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-207ENST00000521434 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
MRPS28-207ENST00000521434 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
MRPS28-207ENST00000521434 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
MRPS28-207ENST00000521434 CHRNA2Q15822 529 aa13.22□□□□□ -0.29
MRPS28-207ENST00000521434 NGDNQ8NEJ9 315 aaKnown RBP13.22□□□□□ -0.29
MRPS28-207ENST00000521434 SPON1Q9HCB6 807 aa13.22□□□□□ -0.29
MRPS28-207ENST00000521434 ADGRB1O14514 1584 aa13.21□□□□□ -0.29
MRPS28-207ENST00000521434 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
MRPS28-207ENST00000521434 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
MRPS28-207ENST00000521434 MINK1Q8N4C8 1332 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-207ENST00000521434 WASLO00401 505 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-207ENST00000521434 KCNQ2O43526 872 aa13.2□□□□□ -0.3
MRPS28-207ENST00000521434 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
MRPS28-207ENST00000521434 TRAK1Q9UPV9 953 aa13.19□□□□□ -0.3
MRPS28-207ENST00000521434 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
MRPS28-207ENST00000521434 ATP7BP35670 1465 aa13.18□□□□□ -0.3
MRPS28-207ENST00000521434 EVA1CP58658 441 aa13.18□□□□□ -0.3
MRPS28-207ENST00000521434 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
MRPS28-207ENST00000521434 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
MRPS28-207ENST00000521434 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-207ENST00000521434 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
MRPS28-207ENST00000521434 PARP4Q9UKK3 1724 aaKnown RBP13.17□□□□□ -0.3
MRPS28-207ENST00000521434 TCP11L2Q8N4U5 519 aa13.17□□□□□ -0.3
MRPS28-207ENST00000521434 SBF2Q86WG5 1849 aa13.17□□□□□ -0.3
MRPS28-207ENST00000521434 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
MRPS28-207ENST00000521434 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
MRPS28-207ENST00000521434 LARP1Q6PKG0 1096 aaKnown RBP13.15□□□□□ -0.3
MRPS28-207ENST00000521434 THRAP3Q9Y2W1 955 aaKnown RBP13.15□□□□□ -0.3
MRPS28-207ENST00000521434 CHD4Q14839 1912 aa13.15□□□□□ -0.3
MRPS28-207ENST00000521434 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
MRPS28-207ENST00000521434 CASZ1Q86V15 1759 aa13.15□□□□□ -0.31
MRPS28-207ENST00000521434 UTRNP46939 3433 aa13.14□□□□□ -0.31
MRPS28-207ENST00000521434 NUTM2GQ5VZR2 741 aa13.14□□□□□ -0.31
MRPS28-207ENST00000521434 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
MRPS28-207ENST00000521434 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
MRPS28-207ENST00000521434 CPDO75976 1380 aa13.13□□□□□ -0.31
MRPS28-207ENST00000521434 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
MRPS28-207ENST00000521434 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
MRPS28-207ENST00000521434 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
MRPS28-207ENST00000521434 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
MRPS28-207ENST00000521434 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
MRPS28-207ENST00000521434 POLR3AO14802 1390 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-207ENST00000521434 PLSCR1O15162 318 aa13.11□□□□□ -0.31
MRPS28-207ENST00000521434 ZNF784Q8NCA9 323 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-207ENST00000521434 MYOM1P52179 1685 aa13.1□□□□□ -0.31
MRPS28-207ENST00000521434 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
MRPS28-207ENST00000521434 ACEP12821 1306 aa13.1□□□□□ -0.31
MRPS28-207ENST00000521434 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
MRPS28-207ENST00000521434 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-207ENST00000521434 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
MRPS28-207ENST00000521434 USP19O94966 1318 aa13.09□□□□□ -0.31
MRPS28-207ENST00000521434 CRB1P82279 1406 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms