RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
PVT1-210ENST00000521122 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
PVT1-210ENST00000521122 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
PVT1-210ENST00000521122 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
PVT1-210ENST00000521122 GRIN3BO60391 1043 aa14.06□□□□□ -0.16
PVT1-210ENST00000521122 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
PVT1-210ENST00000521122 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
PVT1-210ENST00000521122 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
PVT1-210ENST00000521122 HFM1A2PYH4 1435 aa14.06□□□□□ -0.16
PVT1-210ENST00000521122 SPATA31A1Q5TZJ5 1347 aa14.05□□□□□ -0.16
PVT1-210ENST00000521122 ADCY9O60503 1353 aa14.05□□□□□ -0.16
PVT1-210ENST00000521122 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
PVT1-210ENST00000521122 KIF1AQ12756 1690 aa14.04□□□□□ -0.16
PVT1-210ENST00000521122 KIF3CO14782 793 aa14.03□□□□□ -0.16
PVT1-210ENST00000521122 ARHGEF10O15013 1369 aa14.03□□□□□ -0.16
PVT1-210ENST00000521122 STK32BQ9NY57 414 aa14.02□□□□□ -0.17
PVT1-210ENST00000521122 WDR90Q96KV7 1748 aa14.01□□□□□ -0.17
PVT1-210ENST00000521122 TNS2Q63HR2 1409 aa14□□□□□ -0.17
PVT1-210ENST00000521122 SBNO1A3KN83 1393 aa14□□□□□ -0.17
PVT1-210ENST00000521122 NUTM2FA1L443 756 aa14□□□□□ -0.17
PVT1-210ENST00000521122 PSME1Q06323 249 aa14□□□□□ -0.17
PVT1-210ENST00000521122 SLC15A2Q16348 729 aa14□□□□□ -0.17
PVT1-210ENST00000521122 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
PVT1-210ENST00000521122 YBX3P16989 372 aaKnown RBP eCLIP13.99□□□□□ -0.17
PVT1-210ENST00000521122 PROM2Q8N271 834 aa13.99□□□□□ -0.17
PVT1-210ENST00000521122 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
PVT1-210ENST00000521122 BARGINQ6ZT62 677 aa13.97□□□□□ -0.17
PVT1-210ENST00000521122 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
PVT1-210ENST00000521122 FAM161AQ3B820 660 aa13.96□□□□□ -0.17
PVT1-210ENST00000521122 TECPR2O15040 1411 aa13.96□□□□□ -0.18
PVT1-210ENST00000521122 NAIPQ13075 1403 aa13.96□□□□□ -0.18
PVT1-210ENST00000521122 NLGN2Q8NFZ4 835 aa13.95□□□□□ -0.18
PVT1-210ENST00000521122 ANKRD30AQ9BXX3 1397 aa13.95□□□□□ -0.18
PVT1-210ENST00000521122 E9PCH4 1651 aa13.95□□□□□ -0.18
PVT1-210ENST00000521122 TOMM70O94826 608 aa13.94□□□□□ -0.18
PVT1-210ENST00000521122 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
PVT1-210ENST00000521122 HTRA3P83110 453 aa13.93□□□□□ -0.18
PVT1-210ENST00000521122 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
PVT1-210ENST00000521122 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
PVT1-210ENST00000521122 OVOS2A0A0G2JMS6 1433 aa13.91□□□□□ -0.18
PVT1-210ENST00000521122 OVOS2A0A0J9YW53 1432 aa13.91□□□□□ -0.18
PVT1-210ENST00000521122 OVOS2Q6IE36 1432 aa13.91□□□□□ -0.18
PVT1-210ENST00000521122 PEAK1Q9H792 1746 aa13.91□□□□□ -0.18
PVT1-210ENST00000521122 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
PVT1-210ENST00000521122 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
PVT1-210ENST00000521122 USP35Q9P2H5 1018 aa13.91□□□□□ -0.18
PVT1-210ENST00000521122 DAPK1P53355 1430 aa13.9□□□□□ -0.18
PVT1-210ENST00000521122 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
PVT1-210ENST00000521122 PRDM11Q9NQV5 511 aa13.9□□□□□ -0.18
PVT1-210ENST00000521122 STRN4Q9NRL3 753 aa13.9□□□□□ -0.18
PVT1-210ENST00000521122 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
PVT1-210ENST00000521122 TXNRD1Q16881 649 aa13.89□□□□□ -0.19
PVT1-210ENST00000521122 NRXN1Q9ULB1 1477 aa13.88□□□□□ -0.19
PVT1-210ENST00000521122 POLD1P28340 1107 aa13.88□□□□□ -0.19
PVT1-210ENST00000521122 PTF1AQ7RTS3 328 aa13.88□□□□□ -0.19
PVT1-210ENST00000521122 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
PVT1-210ENST00000521122 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
PVT1-210ENST00000521122 COL24A1Q17RW2 1714 aa13.86□□□□□ -0.19
PVT1-210ENST00000521122 TCP11L2Q8N4U5 519 aa13.85□□□□□ -0.19
PVT1-210ENST00000521122 ARHGEF28Q8N1W1 1705 aaKnown RBP13.84□□□□□ -0.19
PVT1-210ENST00000521122 CRYBG1Q9Y4K1 1723 aa13.84□□□□□ -0.19
PVT1-210ENST00000521122 SSH2Q76I76 1423 aa13.83□□□□□ -0.2
PVT1-210ENST00000521122 ANKRD50Q9ULJ7 1429 aa13.83□□□□□ -0.2
PVT1-210ENST00000521122 TOPAZ1Q8N9V7 1692 aa13.83□□□□□ -0.2
PVT1-210ENST00000521122 ATP7BP35670 1465 aa13.83□□□□□ -0.2
PVT1-210ENST00000521122 SLC16A10Q8TF71 515 aa13.83□□□□□ -0.2
PVT1-210ENST00000521122 THRAP3Q9Y2W1 955 aaKnown RBP13.83□□□□□ -0.2
PVT1-210ENST00000521122 ALS2Q96Q42 1657 aa13.82□□□□□ -0.2
PVT1-210ENST00000521122 RGPD8O14715 1765 aaPredicted RBP13.82□□□□□ -0.2
PVT1-210ENST00000521122 TULP4Q9NRJ4 1543 aa13.82□□□□□ -0.2
PVT1-210ENST00000521122 RBM46Q8TBY0 533 aaKnown RBP13.82□□□□□ -0.2
PVT1-210ENST00000521122 KIAA0232Q92628 1395 aa13.82□□□□□ -0.2
PVT1-210ENST00000521122 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
PVT1-210ENST00000521122 MLLT1Q03111 559 aaPredicted RBP13.81□□□□□ -0.2
PVT1-210ENST00000521122 CHRNA2Q15822 529 aa13.81□□□□□ -0.2
PVT1-210ENST00000521122 WAPLQ7Z5K2 1190 aa13.81□□□□□ -0.2
PVT1-210ENST00000521122 PAPPAQ13219 1627 aa13.8□□□□□ -0.2
PVT1-210ENST00000521122 KIAA1210Q9ULL0 1709 aa13.8□□□□□ -0.2
PVT1-210ENST00000521122 EVA1CP58658 441 aa13.79□□□□□ -0.2
PVT1-210ENST00000521122 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
PVT1-210ENST00000521122 FSTL1Q12841 308 aa13.78□□□□□ -0.2
PVT1-210ENST00000521122 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
PVT1-210ENST00000521122 BCL9O00512 1426 aa13.78□□□□□ -0.2
PVT1-210ENST00000521122 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
PVT1-210ENST00000521122 CLTCL1P53675 1640 aa13.76□□□□□ -0.21
PVT1-210ENST00000521122 USP19O94966 1318 aa13.76□□□□□ -0.21
PVT1-210ENST00000521122 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
PVT1-210ENST00000521122 PDE4DIPQ5VU43 2346 aa13.75□□□□□ -0.21
PVT1-210ENST00000521122 PLEKHH1Q9ULM0 1364 aa13.75□□□□□ -0.21
PVT1-210ENST00000521122 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
PVT1-210ENST00000521122 LRRC37A3O60309 1634 aa13.75□□□□□ -0.21
PVT1-210ENST00000521122 RGS19P49795 217 aa13.74□□□□□ -0.21
PVT1-210ENST00000521122 QSER1Q2KHR3 1735 aa13.73□□□□□ -0.21
PVT1-210ENST00000521122 NMRK2Q9NPI5 230 aa13.73□□□□□ -0.21
PVT1-210ENST00000521122 PHRF1Q9P1Y6 1649 aaKnown RBP13.72□□□□□ -0.21
PVT1-210ENST00000521122 DDB1Q16531 1140 aa13.72□□□□□ -0.21
PVT1-210ENST00000521122 PRDM10Q9NQV6 1147 aa13.72□□□□□ -0.21
PVT1-210ENST00000521122 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
PVT1-210ENST00000521122 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
PVT1-210ENST00000521122 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms