RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
CTNNA1-225ENST00000520865 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
CTNNA1-225ENST00000520865 PPP4CP60510 307 aa9.84□□□□□ -0.83
CTNNA1-225ENST00000520865 DESI1Q6ICB0 168 aa9.84□□□□□ -0.83
CTNNA1-225ENST00000520865 WWC1Q8IX03 1113 aa9.84□□□□□ -0.83
CTNNA1-225ENST00000520865 ALG2Q9H553 416 aa9.84□□□□□ -0.83
CTNNA1-225ENST00000520865 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
CTNNA1-225ENST00000520865 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
CTNNA1-225ENST00000520865 Q3C1V9 767 aa9.83□□□□□ -0.84
CTNNA1-225ENST00000520865 WNT2BQ93097 391 aa9.83□□□□□ -0.84
CTNNA1-225ENST00000520865 UCN2Q96RP3 112 aa9.83□□□□□ -0.84
CTNNA1-225ENST00000520865 USB1Q9BQ65 265 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-225ENST00000520865 PODXL2Q9NZ53 605 aa9.83□□□□□ -0.84
CTNNA1-225ENST00000520865 TSR3Q9UJK0 312 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-225ENST00000520865 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-225ENST00000520865 WASHC4Q2M389 1173 aa9.82□□□□□ -0.84
CTNNA1-225ENST00000520865 CFAP70Q5T0N1 1121 aa9.82□□□□□ -0.84
CTNNA1-225ENST00000520865 CFTRP13569 1480 aa9.82□□□□□ -0.84
CTNNA1-225ENST00000520865 F12P00748 615 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-225ENST00000520865 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
CTNNA1-225ENST00000520865 SALL2Q9Y467 1007 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-225ENST00000520865 PCDHB3Q9Y5E6 796 aa9.81□□□□□ -0.84
CTNNA1-225ENST00000520865 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
CTNNA1-225ENST00000520865 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-225ENST00000520865 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-225ENST00000520865 MAP10Q9P2G4 905 aa9.8□□□□□ -0.84
CTNNA1-225ENST00000520865 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-225ENST00000520865 ANP32EQ9BTT0 268 aa9.79□□□□□ -0.84
CTNNA1-225ENST00000520865 PRR14Q9BWN1 585 aa9.79□□□□□ -0.84
CTNNA1-225ENST00000520865 TOP2AP11388 1531 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-225ENST00000520865 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-225ENST00000520865 PRDM9Q9NQV7 894 aa9.78□□□□□ -0.84
CTNNA1-225ENST00000520865 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-225ENST00000520865 POTEMA6NI47 508 aa9.77□□□□□ -0.85
CTNNA1-225ENST00000520865 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-225ENST00000520865 JUNDP17535 347 aa9.77□□□□□ -0.85
CTNNA1-225ENST00000520865 RFX1P22670 979 aa9.77□□□□□ -0.85
CTNNA1-225ENST00000520865 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.85
CTNNA1-225ENST00000520865 FBXO45P0C2W1 286 aa9.76□□□□□ -0.85
CTNNA1-225ENST00000520865 COPS2P61201 443 aa9.76□□□□□ -0.85
CTNNA1-225ENST00000520865 THSD4Q6ZMP0 1018 aa9.76□□□□□ -0.85
CTNNA1-225ENST00000520865 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-225ENST00000520865 TLL1O43897 1013 aa9.75□□□□□ -0.85
CTNNA1-225ENST00000520865 NR1I2O75469 434 aa9.75□□□□□ -0.85
CTNNA1-225ENST00000520865 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
CTNNA1-225ENST00000520865 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
CTNNA1-225ENST00000520865 OCSTAMPQ9BR26 566 aa9.74□□□□□ -0.85
CTNNA1-225ENST00000520865 DXOO77932 396 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-225ENST00000520865 PTPRNQ16849 979 aa9.73□□□□□ -0.85
CTNNA1-225ENST00000520865 FAM9AQ8IZU1 332 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-225ENST00000520865 TFIP11Q9UBB9 837 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-225ENST00000520865 FKBPLQ9UIM3 349 aa9.73□□□□□ -0.85
CTNNA1-225ENST00000520865 PPP1R15AO75807 674 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-225ENST00000520865 NR1H3Q13133 447 aa9.72□□□□□ -0.85
CTNNA1-225ENST00000520865 MSS51Q4VC12 460 aa9.72□□□□□ -0.85
CTNNA1-225ENST00000520865 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
CTNNA1-225ENST00000520865 CARNS1A5YM72 827 aa9.71□□□□□ -0.86
CTNNA1-225ENST00000520865 PIK3CDO00329 1044 aa9.71□□□□□ -0.86
CTNNA1-225ENST00000520865 MMP16P51512 607 aa9.71□□□□□ -0.86
CTNNA1-225ENST00000520865 PBXIP1Q96AQ6 731 aa9.71□□□□□ -0.86
CTNNA1-225ENST00000520865 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-225ENST00000520865 SPSB2Q99619 263 aa9.71□□□□□ -0.86
CTNNA1-225ENST00000520865 CCDC88BA6NC98 1476 aa9.7□□□□□ -0.86
CTNNA1-225ENST00000520865 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-225ENST00000520865 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
CTNNA1-225ENST00000520865 LMOD1P29536 600 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-225ENST00000520865 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
CTNNA1-225ENST00000520865 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
CTNNA1-225ENST00000520865 EVA1BQ9NVM1 165 aa9.69□□□□□ -0.86
CTNNA1-225ENST00000520865 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-225ENST00000520865 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
CTNNA1-225ENST00000520865 CCNYL3P0C7X3 344 aa9.68□□□□□ -0.86
CTNNA1-225ENST00000520865 CTHP32929 405 aa9.68□□□□□ -0.86
CTNNA1-225ENST00000520865 SOX11P35716 441 aa9.68□□□□□ -0.86
CTNNA1-225ENST00000520865 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
CTNNA1-225ENST00000520865 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-225ENST00000520865 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
CTNNA1-225ENST00000520865 MTRQ99707 1265 aa9.67□□□□□ -0.86
CTNNA1-225ENST00000520865 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
CTNNA1-225ENST00000520865 ZPR1O75312 459 aa9.66□□□□□ -0.86
CTNNA1-225ENST00000520865 FAM174AQ8TBP5 190 aa9.66□□□□□ -0.86
CTNNA1-225ENST00000520865 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
CTNNA1-225ENST00000520865 EIF4G2P78344 907 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTNNA1-225ENST00000520865 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.86
CTNNA1-225ENST00000520865 RIMBP3CA6NJZ7 1639 aa9.64□□□□□ -0.87
CTNNA1-225ENST00000520865 RIMBP3BA6NNM3 1639 aa9.64□□□□□ -0.87
CTNNA1-225ENST00000520865 RIMBP3Q9UFD9 1639 aa9.64□□□□□ -0.87
CTNNA1-225ENST00000520865 ADH1BP00325 375 aa9.64□□□□□ -0.87
CTNNA1-225ENST00000520865 MYT1LQ9UL68 1186 aa9.64□□□□□ -0.87
CTNNA1-225ENST00000520865 ZC3H4Q9UPT8 1303 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-225ENST00000520865 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
CTNNA1-225ENST00000520865 ATP9BO43861 1147 aa9.63□□□□□ -0.87
CTNNA1-225ENST00000520865 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
CTNNA1-225ENST00000520865 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
CTNNA1-225ENST00000520865 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
CTNNA1-225ENST00000520865 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
CTNNA1-225ENST00000520865 PTPN5P54829 565 aa9.62□□□□□ -0.87
CTNNA1-225ENST00000520865 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-225ENST00000520865 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
CTNNA1-225ENST00000520865 AQRO60306 1485 aaKnown RBP eCLIP9.61□□□□□ -0.878e-7■■■■■ 28.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms