RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
SPARC-202ENST00000520687 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
SPARC-202ENST00000520687 ZNF521Q96K83 1311 aa13.11□□□□□ -0.31
SPARC-202ENST00000520687 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
SPARC-202ENST00000520687 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
SPARC-202ENST00000520687 SRPK2P78362 688 aaKnown RBP13.1□□□□□ -0.31
SPARC-202ENST00000520687 STK26Q9P289 416 aa13.1□□□□□ -0.31
SPARC-202ENST00000520687 KNDC1Q76NI1 1749 aa13.09□□□□□ -0.31
SPARC-202ENST00000520687 NRXN3Q9Y4C0 1643 aa13.09□□□□□ -0.31
SPARC-202ENST00000520687 YY1P25490 414 aa13.09□□□□□ -0.31
SPARC-202ENST00000520687 LTKP29376 864 aa13.09□□□□□ -0.31
SPARC-202ENST00000520687 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
SPARC-202ENST00000520687 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
SPARC-202ENST00000520687 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
SPARC-202ENST00000520687 TECPR2O15040 1411 aa13.07□□□□□ -0.32
SPARC-202ENST00000520687 E9PSI1 815 aa13.07□□□□□ -0.32
SPARC-202ENST00000520687 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
SPARC-202ENST00000520687 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
SPARC-202ENST00000520687 NHSL1Q5SYE7 1610 aa13.07□□□□□ -0.32
SPARC-202ENST00000520687 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
SPARC-202ENST00000520687 CCDC136Q96JN2 1154 aa13.06□□□□□ -0.32
SPARC-202ENST00000520687 CDK19Q9BWU1 502 aa13.06□□□□□ -0.32
SPARC-202ENST00000520687 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
SPARC-202ENST00000520687 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
SPARC-202ENST00000520687 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
SPARC-202ENST00000520687 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
SPARC-202ENST00000520687 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
SPARC-202ENST00000520687 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
SPARC-202ENST00000520687 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
SPARC-202ENST00000520687 ATP7BP35670 1465 aa13.04□□□□□ -0.32
SPARC-202ENST00000520687 DUSP27Q5VZP5 1158 aa13.04□□□□□ -0.32
SPARC-202ENST00000520687 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
SPARC-202ENST00000520687 DIP2AQ14689 1571 aa13.04□□□□□ -0.32
SPARC-202ENST00000520687 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
SPARC-202ENST00000520687 MTHFSP49914 203 aa13.03□□□□□ -0.32
SPARC-202ENST00000520687 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
SPARC-202ENST00000520687 APAF1O14727 1248 aa13.03□□□□□ -0.32
SPARC-202ENST00000520687 SAFB2Q14151 953 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPARC-202ENST00000520687 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
SPARC-202ENST00000520687 WDR63Q8IWG1 891 aa13.02□□□□□ -0.33
SPARC-202ENST00000520687 PLEKHG1Q9ULL1 1385 aa13.02□□□□□ -0.33
SPARC-202ENST00000520687 WASLO00401 505 aaPredicted RBP13.01□□□□□ -0.33
SPARC-202ENST00000520687 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
SPARC-202ENST00000520687 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
SPARC-202ENST00000520687 FYB1O15117 783 aa13□□□□□ -0.33
SPARC-202ENST00000520687 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
SPARC-202ENST00000520687 METP08581 1390 aa12.99□□□□□ -0.33
SPARC-202ENST00000520687 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
SPARC-202ENST00000520687 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
SPARC-202ENST00000520687 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
SPARC-202ENST00000520687 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
SPARC-202ENST00000520687 RBM19Q9Y4C8 960 aaKnown RBP12.98□□□□□ -0.33
SPARC-202ENST00000520687 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
SPARC-202ENST00000520687 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
SPARC-202ENST00000520687 PNPLA6Q8IY17 1366 aa12.97□□□□□ -0.33
SPARC-202ENST00000520687 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
SPARC-202ENST00000520687 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
SPARC-202ENST00000520687 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
SPARC-202ENST00000520687 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
SPARC-202ENST00000520687 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
SPARC-202ENST00000520687 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
SPARC-202ENST00000520687 TBX22Q9Y458 520 aa12.96□□□□□ -0.33
SPARC-202ENST00000520687 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.33
SPARC-202ENST00000520687 CT47B1P0C2W7 299 aaPredicted RBP12.95□□□□□ -0.34
SPARC-202ENST00000520687 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
SPARC-202ENST00000520687 AAMPQ13685 434 aa12.95□□□□□ -0.34
SPARC-202ENST00000520687 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
SPARC-202ENST00000520687 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
SPARC-202ENST00000520687 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
SPARC-202ENST00000520687 ADAMTS13Q76LX8 1427 aa12.95□□□□□ -0.34
SPARC-202ENST00000520687 EP400Q96L91 3159 aa12.94□□□□□ -0.34
SPARC-202ENST00000520687 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
SPARC-202ENST00000520687 ATF3P18847 181 aa12.94□□□□□ -0.34
SPARC-202ENST00000520687 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPARC-202ENST00000520687 LRRC59Q96AG4 307 aaKnown RBP12.94□□□□□ -0.34
SPARC-202ENST00000520687 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
SPARC-202ENST00000520687 MYH16Q9H6N6 1097 aa12.94□□□□□ -0.34
SPARC-202ENST00000520687 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
SPARC-202ENST00000520687 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
SPARC-202ENST00000520687 NUDT16Q96DE0 195 aaKnown RBP12.94□□□□□ -0.34
SPARC-202ENST00000520687 USP21Q9UK80 565 aa12.94□□□□□ -0.34
SPARC-202ENST00000520687 AATKQ6ZMQ8 1374 aa12.93□□□□□ -0.34
SPARC-202ENST00000520687 IL16Q14005 1332 aa12.93□□□□□ -0.34
SPARC-202ENST00000520687 FANCIQ9NVI1 1328 aa12.93□□□□□ -0.34
SPARC-202ENST00000520687 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
SPARC-202ENST00000520687 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
SPARC-202ENST00000520687 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
SPARC-202ENST00000520687 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
SPARC-202ENST00000520687 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
SPARC-202ENST00000520687 FCHSD2O94868 740 aa12.92□□□□□ -0.34
SPARC-202ENST00000520687 BRINP3Q76B58 766 aa12.92□□□□□ -0.34
SPARC-202ENST00000520687 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
SPARC-202ENST00000520687 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
SPARC-202ENST00000520687 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
SPARC-202ENST00000520687 MS4A1P11836 297 aa12.91□□□□□ -0.34
SPARC-202ENST00000520687 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
SPARC-202ENST00000520687 ATRNO75882 1429 aa12.91□□□□□ -0.34
SPARC-202ENST00000520687 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
SPARC-202ENST00000520687 MSH5O43196 834 aa12.9□□□□□ -0.34
SPARC-202ENST00000520687 NEFMP07197 916 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms