RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 KIAA1468Q9P260 1216 aa5.65□□□□□ -1.5
SREK1-208ENST00000520580 CDK11AQ9UQ88 783 aaPredicted RBP5.65□□□□□ -1.5
SREK1-208ENST00000520580 KCNH2Q12809 1159 aa5.65□□□□□ -1.51
SREK1-208ENST00000520580 NR1H3Q13133 447 aa5.65□□□□□ -1.51
SREK1-208ENST00000520580 FAM69CQ0P6D2 419 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 FAM177A1Q8N128 213 aaPredicted RBP5.64□□□□□ -1.51
SREK1-208ENST00000520580 FAM200AQ8TCP9 573 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 ZNF594Q96JF6 807 aaPredicted RBP5.64□□□□□ -1.51
SREK1-208ENST00000520580 KCNK17Q96T54 332 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 FAM196BA6NMK8 535 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 CFHP08603 1231 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 HOXB3P14651 431 aaPredicted RBP5.64□□□□□ -1.51
SREK1-208ENST00000520580 TAGLNQ01995 201 aaKnown RBP5.64□□□□□ -1.51
SREK1-208ENST00000520580 PTK7Q13308 1070 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 PUS10Q3MIT2 529 aaKnown RBP5.64□□□□□ -1.51
SREK1-208ENST00000520580 GRIPAP1Q4V328 841 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 ANO2Q9NQ90 1003 aa5.64□□□□□ -1.51
SREK1-208ENST00000520580 ZBBXA8MT70 800 aa5.63□□□□□ -1.51
SREK1-208ENST00000520580 ABL1P00519 1130 aa5.63□□□□□ -1.51
SREK1-208ENST00000520580 HMGB1P09429 215 aaKnown RBP5.63□□□□□ -1.51
SREK1-208ENST00000520580 TCF3P15923 654 aa5.63□□□□□ -1.51
SREK1-208ENST00000520580 ATP2B4P23634 1241 aa5.63□□□□□ -1.51
SREK1-208ENST00000520580 SIRT1Q96EB6 747 aa5.63□□□□□ -1.51
SREK1-208ENST00000520580 DOK7Q18PE1 504 aa5.63□□□□□ -1.51
SREK1-208ENST00000520580 LARP1Q6PKG0 1096 aaKnown RBP5.63□□□□□ -1.51
SREK1-208ENST00000520580 PUS7Q96PZ0 661 aaKnown RBP5.63□□□□□ -1.51
SREK1-208ENST00000520580 RIMBP2O15034 1052 aa5.62□□□□□ -1.51
SREK1-208ENST00000520580 LGR5O75473 907 aa5.62□□□□□ -1.51
SREK1-208ENST00000520580 ATP6V1AP38606 617 aa5.62□□□□□ -1.51
SREK1-208ENST00000520580 PPP1R1BQ9UD71 204 aaPredicted RBP5.62□□□□□ -1.51
SREK1-208ENST00000520580 PRMT3O60678 531 aa5.61□□□□□ -1.51
SREK1-208ENST00000520580 ERCC3P19447 782 aa5.61□□□□□ -1.51
SREK1-208ENST00000520580 DPYDQ12882 1025 aa5.61□□□□□ -1.51
SREK1-208ENST00000520580 ZNF211Q13398 564 aaPredicted RBP5.61□□□□□ -1.51
SREK1-208ENST00000520580 RETREG3Q86VR2 466 aa5.61□□□□□ -1.51
SREK1-208ENST00000520580 MAP10Q9P2G4 905 aa5.61□□□□□ -1.51
SREK1-208ENST00000520580 SLFNL1Q499Z3 407 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 NPAS4Q8IUM7 802 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 FKBPLQ9UIM3 349 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 HDGFP51858 240 aaKnown RBP5.6□□□□□ -1.51
SREK1-208ENST00000520580 ANKMY2Q8IV38 441 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 PLEKHM2Q8IWE5 1019 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 OGFOD1Q8N543 542 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 NFATC2IPQ8NCF5 419 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 CLP1Q92989 425 aaKnown RBP5.6□□□□□ -1.51
SREK1-208ENST00000520580 SLC27A5Q9Y2P5 690 aa5.6□□□□□ -1.51
SREK1-208ENST00000520580 H3BRB1 525 aa5.59□□□□□ -1.51
SREK1-208ENST00000520580 CLDN10P78369 228 aa5.59□□□□□ -1.51
SREK1-208ENST00000520580 SAMD7Q7Z3H4 446 aa5.59□□□□□ -1.51
SREK1-208ENST00000520580 TUT1Q9H6E5 874 aaKnown RBP5.59□□□□□ -1.51
SREK1-208ENST00000520580 LYPD8Q6UX82 237 aa5.59□□□□□ -1.51
SREK1-208ENST00000520580 RNF19BQ6ZMZ0 732 aa5.59□□□□□ -1.51
SREK1-208ENST00000520580 RNF135Q8IUD6 432 aa5.59□□□□□ -1.51
SREK1-208ENST00000520580 PLPP7Q8NBV4 271 aa5.59□□□□□ -1.51
SREK1-208ENST00000520580 ATP5J2-PTCD1G3V325 749 aa5.58□□□□□ -1.52
SREK1-208ENST00000520580 PSEN2P49810 448 aa5.58□□□□□ -1.52
SREK1-208ENST00000520580 TSGA10IPQ3SY00 556 aa5.58□□□□□ -1.52
SREK1-208ENST00000520580 PRIMPOLQ96LW4 560 aa5.58□□□□□ -1.52
SREK1-208ENST00000520580 CEP126Q9P2H0 1117 aa5.58□□□□□ -1.52
SREK1-208ENST00000520580 MTMR3Q13615 1198 aa5.58□□□□□ -1.52
SREK1-208ENST00000520580 ZNF326Q5BKZ1 582 aaKnown RBP5.58□□□□□ -1.52
SREK1-208ENST00000520580 CDCA7Q9BWT1 371 aaPredicted RBP5.58□□□□□ -1.52
SREK1-208ENST00000520580 PSDA5PKW4 1024 aaPredicted RBP5.57□□□□□ -1.52
SREK1-208ENST00000520580 SLC4A3P48751 1232 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 TSNAXIP1Q2TAA8 658 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 BLOC1S3Q6QNY0 202 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 ZBED2Q9BTP6 218 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 ZSWIM6Q9HCJ5 1215 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 PCDHB9Q9Y5E1 797 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 MAPK1P28482 360 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 CTHP32929 405 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 MKNK1Q9BUB5 465 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 KIAA1024Q9UPX6 916 aa5.57□□□□□ -1.52
SREK1-208ENST00000520580 POTEMA6NI47 508 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 SMARCA5O60264 1052 aaPredicted RBP5.56□□□□□ -1.52
SREK1-208ENST00000520580 POTEIP0CG38 1075 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 DESI1Q6ICB0 168 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 GLYCTKQ8IVS8 523 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 EML3Q32P44 896 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 MORN1Q5T089 497 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 KCNH8Q96L42 1107 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 DRC1Q96MC2 740 aa5.56□□□□□ -1.52
SREK1-208ENST00000520580 RECKO95980 971 aa5.55□□□□□ -1.52
SREK1-208ENST00000520580 SWI5Q1ZZU3 235 aa5.55□□□□□ -1.52
SREK1-208ENST00000520580 F12P00748 615 aaPredicted RBP5.55□□□□□ -1.52
SREK1-208ENST00000520580 GAS2L2Q8NHY3 880 aa5.55□□□□□ -1.52
SREK1-208ENST00000520580 SREK1Q8WXA9 508 aaKnown RBP5.55□□□□□ -1.52
SREK1-208ENST00000520580 OCSTAMPQ9BR26 566 aa5.55□□□□□ -1.52
SREK1-208ENST00000520580 DNAAF2Q9NVR5 837 aaKnown RBP5.55□□□□□ -1.52
SREK1-208ENST00000520580 RABGEF1Q9UJ41 708 aa5.55□□□□□ -1.52
SREK1-208ENST00000520580 C9orf131Q5VYM1 1079 aa5.54□□□□□ -1.52
SREK1-208ENST00000520580 CAPN12Q6ZSI9 719 aa5.54□□□□□ -1.52
SREK1-208ENST00000520580 USB1Q9BQ65 265 aaKnown RBP5.54□□□□□ -1.52
SREK1-208ENST00000520580 OCLNQ16625 522 aa5.53□□□□□ -1.52
SREK1-208ENST00000520580 FAM98CQ17RN3 349 aaKnown RBP5.53□□□□□ -1.52
SREK1-208ENST00000520580 PHTF2Q8N3S3 785 aa5.53□□□□□ -1.52
SREK1-208ENST00000520580 SEPT3Q9UH03 358 aa5.53□□□□□ -1.52
SREK1-208ENST00000520580 SFI1A8K8P3 1242 aa5.53□□□□□ -1.52
SREK1-208ENST00000520580 PPM1GO15355 546 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms