RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 GLI3P10071 1580 aa23.14■■□□□ 1.29
IGHV3-42-201ENST00000520410 ACEP12821 1306 aa23.13■■□□□ 1.29
IGHV3-42-201ENST00000520410 FAM83GA6ND36 823 aa23.13■■□□□ 1.29
IGHV3-42-201ENST00000520410 BTG4Q9NY30 223 aa23.13■■□□□ 1.29
IGHV3-42-201ENST00000520410 CCDC61Q9Y6R9 512 aa23.13■■□□□ 1.29
IGHV3-42-201ENST00000520410 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
IGHV3-42-201ENST00000520410 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
IGHV3-42-201ENST00000520410 VPS72Q15906 364 aa23.12■■□□□ 1.29
IGHV3-42-201ENST00000520410 CABP2Q9NPB3 220 aa23.12■■□□□ 1.29
IGHV3-42-201ENST00000520410 PRDM11Q9NQV5 511 aa23.12■■□□□ 1.29
IGHV3-42-201ENST00000520410 NWD2Q9ULI1 1742 aa23.12■■□□□ 1.29
IGHV3-42-201ENST00000520410 TOPAZ1Q8N9V7 1692 aa23.1■■□□□ 1.29
IGHV3-42-201ENST00000520410 PPIP5K1Q6PFW1 1433 aa23.1■■□□□ 1.29
IGHV3-42-201ENST00000520410 SEPT12Q8IYM1 358 aa23.09■■□□□ 1.29
IGHV3-42-201ENST00000520410 COL14A1Q05707 1796 aaKnown RBP23.09■■□□□ 1.29
IGHV3-42-201ENST00000520410 NBPF8Q3BBV2 869 aa23.08■■□□□ 1.29
IGHV3-42-201ENST00000520410 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.28
IGHV3-42-201ENST00000520410 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
IGHV3-42-201ENST00000520410 ZC3H6P61129 1189 aaKnown RBP23.06■■□□□ 1.28
IGHV3-42-201ENST00000520410 POLR3AO14802 1390 aaPredicted RBP23.05■■□□□ 1.28
IGHV3-42-201ENST00000520410 ZBTB7CA1YPR0 619 aa23.05■■□□□ 1.28
IGHV3-42-201ENST00000520410 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
IGHV3-42-201ENST00000520410 FAM98CQ17RN3 349 aaKnown RBP23.05■■□□□ 1.28
IGHV3-42-201ENST00000520410 STRN4Q9NRL3 753 aa23.05■■□□□ 1.28
IGHV3-42-201ENST00000520410 KIAA0232Q92628 1395 aa23.04■■□□□ 1.28
IGHV3-42-201ENST00000520410 TONSLQ96HA7 1378 aa23.04■■□□□ 1.28
IGHV3-42-201ENST00000520410 SF3B2Q13435 895 aaKnown RBP23.04■■□□□ 1.28
IGHV3-42-201ENST00000520410 NRAPQ86VF7 1730 aa23.04■■□□□ 1.28
IGHV3-42-201ENST00000520410 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
IGHV3-42-201ENST00000520410 PHRF1Q9P1Y6 1649 aaKnown RBP23.04■■□□□ 1.28
IGHV3-42-201ENST00000520410 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
IGHV3-42-201ENST00000520410 PLEKHG3A1L390 1219 aa23.03■■□□□ 1.28
IGHV3-42-201ENST00000520410 KRT27Q7Z3Y8 459 aa23.01■■□□□ 1.27
IGHV3-42-201ENST00000520410 CABP1Q9NZU7 370 aa23.01■■□□□ 1.27
IGHV3-42-201ENST00000520410 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
IGHV3-42-201ENST00000520410 CCDC125Q86Z20 511 aa23■■□□□ 1.27
IGHV3-42-201ENST00000520410 EVA1CP58658 441 aa22.99■■□□□ 1.27
IGHV3-42-201ENST00000520410 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
IGHV3-42-201ENST00000520410 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
IGHV3-42-201ENST00000520410 USP35Q9P2H5 1018 aa22.98■■□□□ 1.27
IGHV3-42-201ENST00000520410 CARD11Q9BXL7 1154 aa22.97■■□□□ 1.27
IGHV3-42-201ENST00000520410 BLMP54132 1417 aaPredicted RBP22.97■■□□□ 1.27
IGHV3-42-201ENST00000520410 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
IGHV3-42-201ENST00000520410 NRKQ7Z2Y5 1582 aa22.96■■□□□ 1.27
IGHV3-42-201ENST00000520410 SPATA31A5Q5VU36 1347 aa22.95■■□□□ 1.26
IGHV3-42-201ENST00000520410 SPATA31A7Q8IWB4 1347 aa22.95■■□□□ 1.26
IGHV3-42-201ENST00000520410 NLRP6P59044 892 aa22.94■■□□□ 1.26
IGHV3-42-201ENST00000520410 USP6P35125 1406 aa22.93■■□□□ 1.26
IGHV3-42-201ENST00000520410 ONECUT3O60422 494 aaPredicted RBP22.92■■□□□ 1.26
IGHV3-42-201ENST00000520410 FAM182BQ5T319 152 aa22.91■■□□□ 1.26
IGHV3-42-201ENST00000520410 DEFB132Q7Z7B7 95 aa22.91■■□□□ 1.26
IGHV3-42-201ENST00000520410 USP19O94966 1318 aa22.9■■□□□ 1.26
IGHV3-42-201ENST00000520410 SOX12O15370 315 aa22.9■■□□□ 1.26
IGHV3-42-201ENST00000520410 GCP02774 474 aa22.9■■□□□ 1.26
IGHV3-42-201ENST00000520410 BRD4O60885 1362 aaPredicted RBP22.89■■□□□ 1.26
IGHV3-42-201ENST00000520410 SPATA31A1Q5TZJ5 1347 aa22.89■■□□□ 1.26
IGHV3-42-201ENST00000520410 SSH2Q76I76 1423 aa22.88■■□□□ 1.25
IGHV3-42-201ENST00000520410 TMC1Q8TDI8 760 aa22.87■■□□□ 1.25
IGHV3-42-201ENST00000520410 BAG6P46379 1132 aa22.86■■□□□ 1.25
IGHV3-42-201ENST00000520410 LARP1Q6PKG0 1096 aaKnown RBP22.86■■□□□ 1.25
IGHV3-42-201ENST00000520410 ZNF692Q9BU19 519 aaPredicted RBP22.85■■□□□ 1.25
IGHV3-42-201ENST00000520410 CPDO75976 1380 aa22.85■■□□□ 1.25
IGHV3-42-201ENST00000520410 KTN1Q86UP2 1357 aaKnown RBP22.85■■□□□ 1.25
IGHV3-42-201ENST00000520410 THSD7AQ9UPZ6 1657 aa22.84■■□□□ 1.25
IGHV3-42-201ENST00000520410 CAMTA1Q9Y6Y1 1673 aa22.84■■□□□ 1.25
IGHV3-42-201ENST00000520410 PIK3C2AO00443 1686 aa22.83■■□□□ 1.24
IGHV3-42-201ENST00000520410 TTC21BQ7Z4L5 1316 aa22.82■■□□□ 1.24
IGHV3-42-201ENST00000520410 PDE3BQ13370 1112 aa22.82■■□□□ 1.24
IGHV3-42-201ENST00000520410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.81■■□□□ 1.24
IGHV3-42-201ENST00000520410 TCP11L2Q8N4U5 519 aa22.81■■□□□ 1.24
IGHV3-42-201ENST00000520410 LMO7Q8WWI1 1683 aa22.81■■□□□ 1.24
IGHV3-42-201ENST00000520410 SLIT3O75094 1523 aa22.8■■□□□ 1.24
IGHV3-42-201ENST00000520410 AKAP12Q02952 1782 aa22.8■■□□□ 1.24
IGHV3-42-201ENST00000520410 TTC21AQ8NDW8 1320 aa22.8■■□□□ 1.24
IGHV3-42-201ENST00000520410 COL5A2P05997 1499 aaPredicted RBP22.79■■□□□ 1.24
IGHV3-42-201ENST00000520410 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
IGHV3-42-201ENST00000520410 HDGFL2Q7Z4V5 671 aaPredicted RBP22.79■■□□□ 1.24
IGHV3-42-201ENST00000520410 RGPD1P0DJD0 1748 aa22.78■■□□□ 1.24
IGHV3-42-201ENST00000520410 CSB-PGBD3P0DP91 1061 aa22.78■■□□□ 1.24
IGHV3-42-201ENST00000520410 KCNH5Q8NCM2 988 aa22.78■■□□□ 1.24
IGHV3-42-201ENST00000520410 SBNO2Q9Y2G9 1366 aa22.77■■□□□ 1.24
IGHV3-42-201ENST00000520410 BARGINQ6ZT62 677 aa22.77■■□□□ 1.24
IGHV3-42-201ENST00000520410 EP400Q96L91 3159 aa22.77■■□□□ 1.24
IGHV3-42-201ENST00000520410 CRB1P82279 1406 aa22.76■■□□□ 1.23
IGHV3-42-201ENST00000520410 TRIM37O94972 964 aa22.76■■□□□ 1.23
IGHV3-42-201ENST00000520410 EN1Q05925 392 aaPredicted RBP22.76■■□□□ 1.23
IGHV3-42-201ENST00000520410 FAM196AQ6ZSG2 479 aa22.76■■□□□ 1.23
IGHV3-42-201ENST00000520410 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
IGHV3-42-201ENST00000520410 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
IGHV3-42-201ENST00000520410 THRAP3Q9Y2W1 955 aaKnown RBP22.74■■□□□ 1.23
IGHV3-42-201ENST00000520410 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
IGHV3-42-201ENST00000520410 MON2Q7Z3U7 1717 aa22.73■■□□□ 1.23
IGHV3-42-201ENST00000520410 PSDA5PKW4 1024 aaPredicted RBP22.72■■□□□ 1.23
IGHV3-42-201ENST00000520410 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
IGHV3-42-201ENST00000520410 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
IGHV3-42-201ENST00000520410 ST20-MTHFSA0A0A6YYL1 179 aa22.71■■□□□ 1.23
IGHV3-42-201ENST00000520410 NME9Q86XW9 330 aa22.71■■□□□ 1.23
IGHV3-42-201ENST00000520410 APBA3O96018 575 aa22.7■■□□□ 1.22
IGHV3-42-201ENST00000520410 ARHGEF25Q86VW2 580 aa22.69■■□□□ 1.22
IGHV3-42-201ENST00000520410 TNS1Q9HBL0 1735 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms