RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
CTHRC1-203ENST00000520337 APLP1P51693 650 aa11.71□□□□□ -0.53
CTHRC1-203ENST00000520337 MTRQ99707 1265 aa11.71□□□□□ -0.53
CTHRC1-203ENST00000520337 GPR37O15354 613 aa11.7□□□□□ -0.54
CTHRC1-203ENST00000520337 PXYLP1Q8TE99 480 aa11.7□□□□□ -0.54
CTHRC1-203ENST00000520337 GCC2Q8IWJ2 1684 aa11.7□□□□□ -0.54
CTHRC1-203ENST00000520337 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
CTHRC1-203ENST00000520337 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
CTHRC1-203ENST00000520337 AKNAQ7Z591 1439 aa11.69□□□□□ -0.54
CTHRC1-203ENST00000520337 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
CTHRC1-203ENST00000520337 NAIPQ13075 1403 aa11.69□□□□□ -0.54
CTHRC1-203ENST00000520337 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
CTHRC1-203ENST00000520337 GLI2P10070 1586 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 HRCP23327 699 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 EFCAB2Q5VUJ9 269 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 GPIHBP1Q8IV16 184 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 ARHGEF12Q9NZN5 1544 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 PLEKHH2Q8IVE3 1493 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
CTHRC1-203ENST00000520337 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
CTHRC1-203ENST00000520337 ABCC1P33527 1531 aa11.67□□□□□ -0.54
CTHRC1-203ENST00000520337 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
CTHRC1-203ENST00000520337 METTL3Q86U44 580 aaKnown RBP11.67□□□□□ -0.54
CTHRC1-203ENST00000520337 ADGRL2O95490 1459 aa11.66□□□□□ -0.54
CTHRC1-203ENST00000520337 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
CTHRC1-203ENST00000520337 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
CTHRC1-203ENST00000520337 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
CTHRC1-203ENST00000520337 FANCAO15360 1455 aa11.65□□□□□ -0.54
CTHRC1-203ENST00000520337 KDM6BO15054 1643 aa11.65□□□□□ -0.54
CTHRC1-203ENST00000520337 RSPH4AQ5TD94 716 aa11.65□□□□□ -0.54
CTHRC1-203ENST00000520337 CD109Q6YHK3 1445 aa11.65□□□□□ -0.54
CTHRC1-203ENST00000520337 DIP2BQ9P265 1576 aa11.65□□□□□ -0.54
CTHRC1-203ENST00000520337 CCDC141Q6ZP82 1450 aa11.64□□□□□ -0.55
CTHRC1-203ENST00000520337 MAST1Q9Y2H9 1570 aa11.64□□□□□ -0.55
CTHRC1-203ENST00000520337 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
CTHRC1-203ENST00000520337 Q6ZNB5 142 aa11.64□□□□□ -0.55
CTHRC1-203ENST00000520337 CCER1Q8TC90 406 aaPredicted RBP11.64□□□□□ -0.55
CTHRC1-203ENST00000520337 C9orf84Q5VXU9 1444 aa11.63□□□□□ -0.55
CTHRC1-203ENST00000520337 FECHP22830 423 aa11.63□□□□□ -0.55
CTHRC1-203ENST00000520337 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
CTHRC1-203ENST00000520337 DHX57Q6P158 1386 aaKnown RBP11.63□□□□□ -0.55
CTHRC1-203ENST00000520337 TRAPPC8Q9Y2L5 1435 aa11.62□□□□□ -0.55
CTHRC1-203ENST00000520337 PCDHB3Q9Y5E6 796 aa11.62□□□□□ -0.55
CTHRC1-203ENST00000520337 CFAP74Q9C0B2 1584 aa11.62□□□□□ -0.55
CTHRC1-203ENST00000520337 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
CTHRC1-203ENST00000520337 TSPOAP1O95153 1857 aa11.61□□□□□ -0.55
CTHRC1-203ENST00000520337 ANKRD30AQ9BXX3 1397 aa11.6□□□□□ -0.55
CTHRC1-203ENST00000520337 LCE2BO14633 110 aa11.6□□□□□ -0.55
CTHRC1-203ENST00000520337 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
CTHRC1-203ENST00000520337 TSPY4P0CV99 314 aa11.6□□□□□ -0.55
CTHRC1-203ENST00000520337 TSPY10P0CW01 314 aa11.6□□□□□ -0.55
CTHRC1-203ENST00000520337 ADGRL1O94910 1474 aa11.59□□□□□ -0.55
CTHRC1-203ENST00000520337 CFHP08603 1231 aa11.59□□□□□ -0.55
CTHRC1-203ENST00000520337 COPS2P61201 443 aa11.59□□□□□ -0.55
CTHRC1-203ENST00000520337 FAM69CQ0P6D2 419 aa11.59□□□□□ -0.55
CTHRC1-203ENST00000520337 ZNF516Q92618 1163 aa11.59□□□□□ -0.55
CTHRC1-203ENST00000520337 SCAPERQ9BY12 1400 aa11.59□□□□□ -0.55
CTHRC1-203ENST00000520337 PLXNC1O60486 1568 aa11.58□□□□□ -0.55
CTHRC1-203ENST00000520337 NEO1Q92859 1461 aa11.58□□□□□ -0.56
CTHRC1-203ENST00000520337 ZPR1O75312 459 aa11.58□□□□□ -0.56
CTHRC1-203ENST00000520337 DAXXQ9UER7 740 aaPredicted RBP11.58□□□□□ -0.56
CTHRC1-203ENST00000520337 SLC10A3P09131 477 aa11.57□□□□□ -0.56
CTHRC1-203ENST00000520337 ZEB1P37275 1124 aaPredicted RBP11.57□□□□□ -0.56
CTHRC1-203ENST00000520337 AFAP1Q8N556 730 aa11.57□□□□□ -0.56
CTHRC1-203ENST00000520337 INO80Q9ULG1 1556 aaPredicted RBP11.56□□□□□ -0.56
CTHRC1-203ENST00000520337 ZFYVE16Q7Z3T8 1539 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 KIF15Q9NS87 1388 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 RICTORQ6R327 1708 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 ANKRD50Q9ULJ7 1429 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 KIDINS220Q9ULH0 1771 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 GGCXP38435 758 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 CLSPNQ9HAW4 1339 aa11.55□□□□□ -0.56
CTHRC1-203ENST00000520337 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
CTHRC1-203ENST00000520337 BLOC1S3Q6QNY0 202 aa11.54□□□□□ -0.56
CTHRC1-203ENST00000520337 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
CTHRC1-203ENST00000520337 SPAG9O60271 1321 aaKnown RBP11.54□□□□□ -0.56
CTHRC1-203ENST00000520337 KDM5CP41229 1560 aa11.54□□□□□ -0.56
CTHRC1-203ENST00000520337 POGZQ7Z3K3 1410 aa11.53□□□□□ -0.56
CTHRC1-203ENST00000520337 DENND4BO75064 1496 aaPredicted RBP11.53□□□□□ -0.56
CTHRC1-203ENST00000520337 ATP7AQ04656 1500 aa11.53□□□□□ -0.56
CTHRC1-203ENST00000520337 ACIN1Q9UKV3 1341 aaKnown RBP11.53□□□□□ -0.56
CTHRC1-203ENST00000520337 ZNF518AQ6AHZ1 1483 aa11.52□□□□□ -0.56
CTHRC1-203ENST00000520337 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.57
CTHRC1-203ENST00000520337 SULF1Q8IWU6 871 aa11.52□□□□□ -0.57
CTHRC1-203ENST00000520337 TMUB1Q9BVT8 246 aa11.52□□□□□ -0.57
CTHRC1-203ENST00000520337 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
CTHRC1-203ENST00000520337 FRMPD1Q5SYB0 1578 aa11.5□□□□□ -0.57
CTHRC1-203ENST00000520337 NR1I2O75469 434 aa11.5□□□□□ -0.57
CTHRC1-203ENST00000520337 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
CTHRC1-203ENST00000520337 PZPP20742 1482 aa11.5□□□□□ -0.57
CTHRC1-203ENST00000520337 TEX14Q8IWB6 1497 aa11.5□□□□□ -0.57
CTHRC1-203ENST00000520337 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
CTHRC1-203ENST00000520337 LAPTM4AQ15012 233 aa11.49□□□□□ -0.57
CTHRC1-203ENST00000520337 PHOX2BQ99453 314 aa11.49□□□□□ -0.57
CTHRC1-203ENST00000520337 MPHOSPH9Q99550 1183 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms