RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ERICH6Q7L0X2 663 aa12.65□□□□□ -0.38
PTPN12-213ENST00000519553 IRF5Q13568 498 aa12.64□□□□□ -0.39
PTPN12-213ENST00000519553 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
PTPN12-213ENST00000519553 RAD21O60216 631 aa12.63□□□□□ -0.39
PTPN12-213ENST00000519553 ABL2P42684 1182 aa12.63□□□□□ -0.39
PTPN12-213ENST00000519553 PRM3Q9NNZ6 103 aa12.63□□□□□ -0.39
PTPN12-213ENST00000519553 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
PTPN12-213ENST00000519553 LIAT1Q6ZQX7 453 aa12.62□□□□□ -0.39
PTPN12-213ENST00000519553 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
PTPN12-213ENST00000519553 ARMC2Q8NEN0 867 aa12.62□□□□□ -0.39
PTPN12-213ENST00000519553 TRIM32Q13049 653 aa12.61□□□□□ -0.39
PTPN12-213ENST00000519553 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
PTPN12-213ENST00000519553 RPIAP49247 311 aa12.6□□□□□ -0.39
PTPN12-213ENST00000519553 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
PTPN12-213ENST00000519553 BAP1Q92560 729 aa12.6□□□□□ -0.39
PTPN12-213ENST00000519553 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
PTPN12-213ENST00000519553 LINC01559Q495D7 138 aa12.59□□□□□ -0.39
PTPN12-213ENST00000519553 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
PTPN12-213ENST00000519553 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
PTPN12-213ENST00000519553 ZNF511Q8NB15 262 aa12.58□□□□□ -0.4
PTPN12-213ENST00000519553 OCSTAMPQ9BR26 566 aa12.58□□□□□ -0.4
PTPN12-213ENST00000519553 SH3BP2P78314 561 aa12.57□□□□□ -0.4
PTPN12-213ENST00000519553 SKOR1P84550 965 aa12.57□□□□□ -0.4
PTPN12-213ENST00000519553 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
PTPN12-213ENST00000519553 SH3BP5LQ7L8J4 393 aa12.57□□□□□ -0.4
PTPN12-213ENST00000519553 SLC19A1P41440 591 aa12.56□□□□□ -0.4
PTPN12-213ENST00000519553 SH3RF1Q7Z6J0 888 aa12.55□□□□□ -0.4
PTPN12-213ENST00000519553 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
PTPN12-213ENST00000519553 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
PTPN12-213ENST00000519553 GPSM3Q9Y4H4 160 aa12.54□□□□□ -0.4
PTPN12-213ENST00000519553 TRAK2O60296 914 aa12.53□□□□□ -0.4
PTPN12-213ENST00000519553 WNT7BP56706 349 aa12.53□□□□□ -0.4
PTPN12-213ENST00000519553 C4orf48Q5BLP8 95 aa12.53□□□□□ -0.4
PTPN12-213ENST00000519553 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
PTPN12-213ENST00000519553 SPRYD7Q5W111 196 aa12.52□□□□□ -0.41
PTPN12-213ENST00000519553 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
PTPN12-213ENST00000519553 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
PTPN12-213ENST00000519553 V9GY48 417 aaPredicted RBP12.51□□□□□ -0.41
PTPN12-213ENST00000519553 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
PTPN12-213ENST00000519553 PTK2Q05397 1052 aa12.5□□□□□ -0.41
PTPN12-213ENST00000519553 NR1H3Q13133 447 aa12.5□□□□□ -0.41
PTPN12-213ENST00000519553 WASHC4Q2M389 1173 aa12.5□□□□□ -0.41
PTPN12-213ENST00000519553 ARHGAP9Q9BRR9 750 aa12.5□□□□□ -0.41
PTPN12-213ENST00000519553 POM121CA8CG34 1229 aa12.49□□□□□ -0.41
PTPN12-213ENST00000519553 BPHLQ86WA6 291 aaPredicted RBP12.49□□□□□ -0.41
PTPN12-213ENST00000519553 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
PTPN12-213ENST00000519553 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
PTPN12-213ENST00000519553 ADAM32Q8TC27 787 aa12.47□□□□□ -0.41
PTPN12-213ENST00000519553 C1QTNF2Q9BXJ5 285 aa12.47□□□□□ -0.41
PTPN12-213ENST00000519553 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
PTPN12-213ENST00000519553 ZNF697Q5TEC3 545 aa12.46□□□□□ -0.41
PTPN12-213ENST00000519553 ZNF598Q86UK7 904 aaKnown RBP12.46□□□□□ -0.41
PTPN12-213ENST00000519553 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
PTPN12-213ENST00000519553 AGERQ15109 404 aa12.45□□□□□ -0.42
PTPN12-213ENST00000519553 RC3H1Q5TC82 1133 aaKnown RBP12.45□□□□□ -0.42
PTPN12-213ENST00000519553 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
PTPN12-213ENST00000519553 ADAMTS19Q8TE59 1207 aa12.44□□□□□ -0.42
PTPN12-213ENST00000519553 WNT7AO00755 349 aa12.43□□□□□ -0.42
PTPN12-213ENST00000519553 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
PTPN12-213ENST00000519553 RGS20O76081 388 aa12.42□□□□□ -0.42
PTPN12-213ENST00000519553 VARSP26640 1264 aaKnown RBP12.42□□□□□ -0.42
PTPN12-213ENST00000519553 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
PTPN12-213ENST00000519553 PKD2L1Q9P0L9 805 aa12.42□□□□□ -0.42
PTPN12-213ENST00000519553 TRMT44Q8IYL2 757 aaKnown RBP12.41□□□□□ -0.42
PTPN12-213ENST00000519553 ZNF777Q9ULD5 760 aaPredicted RBP12.41□□□□□ -0.42
PTPN12-213ENST00000519553 MRGPRX2Q96LB1 330 aa12.4□□□□□ -0.42
PTPN12-213ENST00000519553 ALG2Q9H553 416 aa12.4□□□□□ -0.42
PTPN12-213ENST00000519553 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
PTPN12-213ENST00000519553 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
PTPN12-213ENST00000519553 SIAH2O43255 324 aa12.39□□□□□ -0.43
PTPN12-213ENST00000519553 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTPN12-213ENST00000519553 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
PTPN12-213ENST00000519553 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
PTPN12-213ENST00000519553 SOX11P35716 441 aa12.38□□□□□ -0.43
PTPN12-213ENST00000519553 FAM174AQ8TBP5 190 aa12.38□□□□□ -0.43
PTPN12-213ENST00000519553 GLMNQ92990 594 aa12.38□□□□□ -0.43
PTPN12-213ENST00000519553 PCDHB9Q9Y5E1 797 aa12.38□□□□□ -0.43
PTPN12-213ENST00000519553 GDF9O60383 454 aa12.37□□□□□ -0.43
PTPN12-213ENST00000519553 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
PTPN12-213ENST00000519553 TLL2Q9Y6L7 1015 aa12.37□□□□□ -0.43
PTPN12-213ENST00000519553 FOXC1Q12948 553 aa12.36□□□□□ -0.43
PTPN12-213ENST00000519553 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
PTPN12-213ENST00000519553 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
PTPN12-213ENST00000519553 MPNDQ8N594 471 aa12.34□□□□□ -0.43
PTPN12-213ENST00000519553 CDK15Q96Q40 435 aa12.34□□□□□ -0.43
PTPN12-213ENST00000519553 MAP4K5Q9Y4K4 846 aa12.34□□□□□ -0.43
PTPN12-213ENST00000519553 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
PTPN12-213ENST00000519553 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
PTPN12-213ENST00000519553 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
PTPN12-213ENST00000519553 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
PTPN12-213ENST00000519553 PRR20EP86478 221 aa12.31□□□□□ -0.44
PTPN12-213ENST00000519553 PRR20CP86479 221 aa12.31□□□□□ -0.44
PTPN12-213ENST00000519553 PRR20DP86480 221 aa12.31□□□□□ -0.44
PTPN12-213ENST00000519553 PRR20BP86481 221 aa12.31□□□□□ -0.44
PTPN12-213ENST00000519553 PRR20AP86496 221 aa12.31□□□□□ -0.44
PTPN12-213ENST00000519553 CALR3Q96L12 384 aaKnown RBP12.31□□□□□ -0.44
PTPN12-213ENST00000519553 UCN2Q96RP3 112 aa12.31□□□□□ -0.44
PTPN12-213ENST00000519553 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
PTPN12-213ENST00000519553 CDV3Q9UKY7 258 aaKnown RBP12.31□□□□□ -0.44
PTPN12-213ENST00000519553 ESPNB1AK53 854 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms