RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 DNAJC5GQ8N7S2 189 aa11.17□□□□□ -0.62
CTNNA1-216ENST00000519489 ADGRL2O95490 1459 aa11.17□□□□□ -0.62
CTNNA1-216ENST00000519489 KIF15Q9NS87 1388 aa11.16□□□□□ -0.62
CTNNA1-216ENST00000519489 FAM83GA6ND36 823 aa11.16□□□□□ -0.62
CTNNA1-216ENST00000519489 RRP7BPQ9NSQ0 103 aa11.16□□□□□ -0.62
CTNNA1-216ENST00000519489 USP32Q8NFA0 1604 aa11.16□□□□□ -0.62
CTNNA1-216ENST00000519489 GCC2Q8IWJ2 1684 aa11.15□□□□□ -0.62
CTNNA1-216ENST00000519489 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-216ENST00000519489 SGIP1Q9BQI5 828 aa11.15□□□□□ -0.62
CTNNA1-216ENST00000519489 CHD4Q14839 1912 aa11.15□□□□□ -0.62
CTNNA1-216ENST00000519489 SPATA31A3Q5VYP0 1347 aa11.14□□□□□ -0.63
CTNNA1-216ENST00000519489 NPHP3Q7Z494 1330 aa11.14□□□□□ -0.63
CTNNA1-216ENST00000519489 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-216ENST00000519489 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-216ENST00000519489 ERBINQ96RT1 1412 aa11.14□□□□□ -0.63
CTNNA1-216ENST00000519489 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
CTNNA1-216ENST00000519489 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
CTNNA1-216ENST00000519489 ESCO1Q5FWF5 840 aa11.13□□□□□ -0.63
CTNNA1-216ENST00000519489 ROBO2Q9HCK4 1378 aa11.13□□□□□ -0.63
CTNNA1-216ENST00000519489 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
CTNNA1-216ENST00000519489 KANK1Q14678 1352 aa11.12□□□□□ -0.63
CTNNA1-216ENST00000519489 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
CTNNA1-216ENST00000519489 PLCH1Q4KWH8 1693 aa11.11□□□□□ -0.63
CTNNA1-216ENST00000519489 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
CTNNA1-216ENST00000519489 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
CTNNA1-216ENST00000519489 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
CTNNA1-216ENST00000519489 PTPN23Q9H3S7 1636 aa11.1□□□□□ -0.63
CTNNA1-216ENST00000519489 GABBR2O75899 941 aa11.1□□□□□ -0.63
CTNNA1-216ENST00000519489 FAM196AQ6ZSG2 479 aa11.1□□□□□ -0.63
CTNNA1-216ENST00000519489 BTG4Q9NY30 223 aa11.08□□□□□ -0.64
CTNNA1-216ENST00000519489 ATP10DQ9P241 1426 aa11.08□□□□□ -0.64
CTNNA1-216ENST00000519489 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
CTNNA1-216ENST00000519489 NWD2Q9ULI1 1742 aa11.07□□□□□ -0.64
CTNNA1-216ENST00000519489 PCNTO95613 3336 aa11.07□□□□□ -0.64
CTNNA1-216ENST00000519489 GPR162Q16538 588 aa11.07□□□□□ -0.64
CTNNA1-216ENST00000519489 DLC1Q96QB1 1528 aa11.06□□□□□ -0.64
CTNNA1-216ENST00000519489 CLCN6P51797 869 aa11.06□□□□□ -0.64
CTNNA1-216ENST00000519489 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
CTNNA1-216ENST00000519489 ABCC5O15440 1437 aa11.05□□□□□ -0.64
CTNNA1-216ENST00000519489 PTF1AQ7RTS3 328 aa11.05□□□□□ -0.64
CTNNA1-216ENST00000519489 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
CTNNA1-216ENST00000519489 KRT28Q7Z3Y7 464 aa11.03□□□□□ -0.64
CTNNA1-216ENST00000519489 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
CTNNA1-216ENST00000519489 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
CTNNA1-216ENST00000519489 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
CTNNA1-216ENST00000519489 HTRA3P83110 453 aa11.01□□□□□ -0.65
CTNNA1-216ENST00000519489 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-216ENST00000519489 ARXQ96QS3 562 aa11.01□□□□□ -0.65
CTNNA1-216ENST00000519489 SPATA31A1Q5TZJ5 1347 aa11.01□□□□□ -0.65
CTNNA1-216ENST00000519489 KIF3CO14782 793 aa11□□□□□ -0.65
CTNNA1-216ENST00000519489 JMYQ8N9B5 988 aa11□□□□□ -0.65
CTNNA1-216ENST00000519489 ZNF526Q8TF50 670 aaPredicted RBP11□□□□□ -0.65
CTNNA1-216ENST00000519489 TNS3Q68CZ2 1445 aa11□□□□□ -0.65
CTNNA1-216ENST00000519489 APLP1P51693 650 aa10.99□□□□□ -0.65
CTNNA1-216ENST00000519489 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-216ENST00000519489 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
CTNNA1-216ENST00000519489 MTFR1LQ9H019 292 aa10.99□□□□□ -0.65
CTNNA1-216ENST00000519489 GPBP1L1Q9HC44 474 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-216ENST00000519489 ADCY9O60503 1353 aa10.99□□□□□ -0.65
CTNNA1-216ENST00000519489 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
CTNNA1-216ENST00000519489 ABCA3Q99758 1704 aa10.98□□□□□ -0.65
CTNNA1-216ENST00000519489 LRPPRCP42704 1394 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-216ENST00000519489 MYOM3Q5VTT5 1437 aa10.98□□□□□ -0.65
CTNNA1-216ENST00000519489 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
CTNNA1-216ENST00000519489 WWC3Q9ULE0 1092 aa10.97□□□□□ -0.65
CTNNA1-216ENST00000519489 TECPR2O15040 1411 aa10.97□□□□□ -0.65
CTNNA1-216ENST00000519489 PRAG1Q86YV5 1406 aa10.97□□□□□ -0.65
CTNNA1-216ENST00000519489 CROCC2H7BZ55 1655 aa10.97□□□□□ -0.65
CTNNA1-216ENST00000519489 CDC42BPGQ6DT37 1551 aa10.96□□□□□ -0.65
CTNNA1-216ENST00000519489 CCDC144AA2RUR9 1427 aa10.96□□□□□ -0.65
CTNNA1-216ENST00000519489 PLSCR1O15162 318 aa10.96□□□□□ -0.65
CTNNA1-216ENST00000519489 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-216ENST00000519489 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-216ENST00000519489 HFM1A2PYH4 1435 aa10.94□□□□□ -0.66
CTNNA1-216ENST00000519489 NAIPQ13075 1403 aa10.94□□□□□ -0.66
CTNNA1-216ENST00000519489 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-216ENST00000519489 SLC15A2Q16348 729 aa10.94□□□□□ -0.66
CTNNA1-216ENST00000519489 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
CTNNA1-216ENST00000519489 KLRG1Q96E93 195 aa10.94□□□□□ -0.66
CTNNA1-216ENST00000519489 TNS2Q63HR2 1409 aa10.92□□□□□ -0.66
CTNNA1-216ENST00000519489 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
CTNNA1-216ENST00000519489 PDE3BQ13370 1112 aa10.92□□□□□ -0.66
CTNNA1-216ENST00000519489 WAPLQ7Z5K2 1190 aa10.92□□□□□ -0.66
CTNNA1-216ENST00000519489 DAPK1P53355 1430 aa10.92□□□□□ -0.66
CTNNA1-216ENST00000519489 USP35Q9P2H5 1018 aa10.91□□□□□ -0.66
CTNNA1-216ENST00000519489 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.66
CTNNA1-216ENST00000519489 FKBP8Q14318 412 aa10.9□□□□□ -0.66
CTNNA1-216ENST00000519489 BARGINQ6ZT62 677 aa10.9□□□□□ -0.66
CTNNA1-216ENST00000519489 STK32BQ9NY57 414 aa10.9□□□□□ -0.66
CTNNA1-216ENST00000519489 COL14A1Q05707 1796 aaKnown RBP10.9□□□□□ -0.67
CTNNA1-216ENST00000519489 IQGAP3Q86VI3 1631 aa10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 CHRNA2Q15822 529 aa10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 ZNF326Q5BKZ1 582 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 KANK4Q5T7N3 995 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 STRN4Q9NRL3 753 aa10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 ARHGEF10O15013 1369 aa10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 E9PCH4 1651 aa10.89□□□□□ -0.67
CTNNA1-216ENST00000519489 TXNRD1Q16881 649 aa10.88□□□□□ -0.67
CTNNA1-216ENST00000519489 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms