RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
PCM1-212ENST00000519253 ERC2O15083 957 aa10.33□□□□□ -0.76
PCM1-212ENST00000519253 AFAP1Q8N556 730 aa10.33□□□□□ -0.76
PCM1-212ENST00000519253 BAG4O95429 457 aaKnown RBP10.33□□□□□ -0.76
PCM1-212ENST00000519253 SASS6Q6UVJ0 657 aa10.33□□□□□ -0.76
PCM1-212ENST00000519253 TWISTNBQ3B726 338 aaPredicted RBP10.32□□□□□ -0.76
PCM1-212ENST00000519253 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
PCM1-212ENST00000519253 PRKAR2BP31323 418 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 COG3Q96JB2 828 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 C1orf115Q9H7X2 142 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 IL16Q14005 1332 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 ITSN2Q9NZM3 1697 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 FCHSD2O94868 740 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 RAB3GAP1Q15042 981 aa10.32□□□□□ -0.76
PCM1-212ENST00000519253 KDM5BQ9UGL1 1544 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 SMC3Q9UQE7 1217 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 MAGI3Q5TCQ9 1506 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 RPAP2Q8IXW5 612 aaPredicted RBP10.31□□□□□ -0.76
PCM1-212ENST00000519253 RUFY2Q8WXA3 655 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 SPINK5Q9NQ38 1064 aaPredicted RBP10.31□□□□□ -0.76
PCM1-212ENST00000519253 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 EIF2AK4Q9P2K8 1649 aaKnown RBP10.31□□□□□ -0.76
PCM1-212ENST00000519253 NUCB1Q02818 461 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 ZNF771Q7L3S4 317 aaPredicted RBP10.31□□□□□ -0.76
PCM1-212ENST00000519253 FAM135AQ9P2D6 1515 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 WDR33Q9C0J8 1336 aaKnown RBP10.31□□□□□ -0.76
PCM1-212ENST00000519253 OFD1O75665 1012 aa10.31□□□□□ -0.76
PCM1-212ENST00000519253 RAPGEF6Q8TEU7 1601 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 RPGRIP1LQ68CZ1 1315 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 DYNC1I1O14576 645 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 NSD2O96028 1365 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 TPM4P67936 248 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.3□□□□□ -0.76
PCM1-212ENST00000519253 GOLGA6L19H0YKK7 550 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 RLBP1P12271 317 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 KDM5CP41229 1560 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 KIF3AQ9Y496 699 aa10.3□□□□□ -0.76
PCM1-212ENST00000519253 ZKSCAN1P17029 563 aaPredicted RBP10.29□□□□□ -0.76
PCM1-212ENST00000519253 RBM25P49756 843 aaKnown RBP10.29□□□□□ -0.76
PCM1-212ENST00000519253 TBC1D9Q6ZT07 1266 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 HMOX1P09601 288 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 ABCA5Q8WWZ7 1642 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 ZNF521Q96K83 1311 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 SYCE3A1L190 88 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 FSD2A1L4K1 749 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 TERF1P54274 439 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 XPCQ01831 940 aaPredicted RBP10.29□□□□□ -0.76
PCM1-212ENST00000519253 TRMT2AQ8IZ69 625 aaKnown RBP10.29□□□□□ -0.76
PCM1-212ENST00000519253 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.29□□□□□ -0.76
PCM1-212ENST00000519253 MBD5Q9P267 1494 aa10.29□□□□□ -0.76
PCM1-212ENST00000519253 NCBP3Q53F19 620 aaKnown RBP10.28□□□□□ -0.76
PCM1-212ENST00000519253 C14orf37Q86TY3 774 aa10.28□□□□□ -0.76
PCM1-212ENST00000519253 KDM6BO15054 1643 aa10.27□□□□□ -0.76
PCM1-212ENST00000519253 BECN2A8MW95 431 aa10.27□□□□□ -0.76
PCM1-212ENST00000519253 GNAI3P08754 354 aa10.27□□□□□ -0.76
PCM1-212ENST00000519253 SOX12O15370 315 aa10.27□□□□□ -0.77
PCM1-212ENST00000519253 ATAD2Q6PL18 1390 aa10.27□□□□□ -0.77
PCM1-212ENST00000519253 ARHGAP45Q92619 1136 aa10.27□□□□□ -0.77
PCM1-212ENST00000519253 NAP1L2Q9ULW6 460 aaPredicted RBP10.27□□□□□ -0.77
PCM1-212ENST00000519253 IFT57Q9NWB7 429 aa10.27□□□□□ -0.77
PCM1-212ENST00000519253 ZSCAN23Q3MJ62 389 aa10.26□□□□□ -0.77
PCM1-212ENST00000519253 ZKSCAN5Q9Y2L8 839 aa10.26□□□□□ -0.77
PCM1-212ENST00000519253 NFE2L2Q16236 605 aa10.26□□□□□ -0.77
PCM1-212ENST00000519253 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
PCM1-212ENST00000519253 ANTXR1Q9H6X2 564 aa10.26□□□□□ -0.77
PCM1-212ENST00000519253 DENND4BO75064 1496 aaPredicted RBP10.26□□□□□ -0.77
PCM1-212ENST00000519253 A2MP01023 1474 aa10.26□□□□□ -0.77
PCM1-212ENST00000519253 HSP90AB4PQ58FF6 505 aa10.26□□□□□ -0.77
PCM1-212ENST00000519253 VPS37CA5D8V6 355 aaPredicted RBP10.26□□□□□ -0.77
PCM1-212ENST00000519253 PRIMPOLQ96LW4 560 aa10.25□□□□□ -0.77
PCM1-212ENST00000519253 LRSAM1Q6UWE0 723 aa10.25□□□□□ -0.77
PCM1-212ENST00000519253 ADGRF5Q8IZF2 1346 aa10.25□□□□□ -0.77
PCM1-212ENST00000519253 CCDC192P0DO97 292 aa10.25□□□□□ -0.77
PCM1-212ENST00000519253 TNNT3P45378 269 aaPredicted RBP10.25□□□□□ -0.77
PCM1-212ENST00000519253 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
PCM1-212ENST00000519253 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 TNNQ9UQP3 1299 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 SRCIN1Q9C0H9 1055 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 PDCP20941 246 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 UVSSAQ2YD98 709 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
PCM1-212ENST00000519253 CCT4P50991 539 aaKnown RBP10.24□□□□□ -0.77
PCM1-212ENST00000519253 KIAA0556O60303 1618 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 CCDC66A2RUB6 948 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
PCM1-212ENST00000519253 H3BQV1 296 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 GNAI2P04899 355 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 IFFO2Q5TF58 517 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 BICD2Q8TD16 824 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 FIBPO43427 364 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 HSP90B1P14625 803 aaKnown RBP10.23□□□□□ -0.77
PCM1-212ENST00000519253 PDCL2Q8N4E4 241 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 ATP10BO94823 1461 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 NOL7Q9UMY1 257 aaKnown RBP10.23□□□□□ -0.77
PCM1-212ENST00000519253 AEBP1Q8IUX7 1158 aa10.23□□□□□ -0.77
PCM1-212ENST00000519253 PUS7Q96PZ0 661 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms