RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 GGNBP2Q9H3C7 697 aa16.62■□□□□ 0.25
SPIDR-209ENST00000519141 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
SPIDR-209ENST00000519141 TNNT2P45379 298 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-209ENST00000519141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.25
SPIDR-209ENST00000519141 ACEP12821 1306 aa16.61■□□□□ 0.25
SPIDR-209ENST00000519141 USP6P35125 1406 aa16.6■□□□□ 0.25
SPIDR-209ENST00000519141 POLR3AO14802 1390 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-209ENST00000519141 INSRP06213 1382 aa16.59■□□□□ 0.25
SPIDR-209ENST00000519141 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.24
SPIDR-209ENST00000519141 NCOA3Q9Y6Q9 1424 aa16.58■□□□□ 0.24
SPIDR-209ENST00000519141 MSH6P52701 1360 aa16.57■□□□□ 0.24
SPIDR-209ENST00000519141 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
SPIDR-209ENST00000519141 BLMP54132 1417 aaPredicted RBP16.56■□□□□ 0.24
SPIDR-209ENST00000519141 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
SPIDR-209ENST00000519141 PMFBP1Q8TBY8 1022 aa16.56■□□□□ 0.24
SPIDR-209ENST00000519141 NME9Q86XW9 330 aa16.56■□□□□ 0.24
SPIDR-209ENST00000519141 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
SPIDR-209ENST00000519141 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
SPIDR-209ENST00000519141 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
SPIDR-209ENST00000519141 MTHFSP49914 203 aa16.54■□□□□ 0.24
SPIDR-209ENST00000519141 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
SPIDR-209ENST00000519141 COG3Q96JB2 828 aa16.53■□□□□ 0.24
SPIDR-209ENST00000519141 SLAIN2Q9P270 581 aa16.53■□□□□ 0.24
SPIDR-209ENST00000519141 TTC21AQ8NDW8 1320 aa16.53■□□□□ 0.24
SPIDR-209ENST00000519141 C19orf44Q9H6X5 657 aa16.53■□□□□ 0.24
SPIDR-209ENST00000519141 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
SPIDR-209ENST00000519141 DCCP43146 1447 aa16.52■□□□□ 0.24
SPIDR-209ENST00000519141 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.23
SPIDR-209ENST00000519141 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.23
SPIDR-209ENST00000519141 KIF1AQ12756 1690 aa16.51■□□□□ 0.23
SPIDR-209ENST00000519141 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
SPIDR-209ENST00000519141 OVOS2A0A0J9YW53 1432 aa16.51■□□□□ 0.23
SPIDR-209ENST00000519141 OVOS2Q6IE36 1432 aa16.51■□□□□ 0.23
SPIDR-209ENST00000519141 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
SPIDR-209ENST00000519141 AATKQ6ZMQ8 1374 aa16.5■□□□□ 0.23
SPIDR-209ENST00000519141 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
SPIDR-209ENST00000519141 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
SPIDR-209ENST00000519141 COL3A1P02461 1466 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-209ENST00000519141 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
SPIDR-209ENST00000519141 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
SPIDR-209ENST00000519141 USP54Q70EL1 1684 aa16.48■□□□□ 0.23
SPIDR-209ENST00000519141 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
SPIDR-209ENST00000519141 ATF3P18847 181 aa16.48■□□□□ 0.23
SPIDR-209ENST00000519141 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
SPIDR-209ENST00000519141 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
SPIDR-209ENST00000519141 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
SPIDR-209ENST00000519141 MST1RQ04912 1400 aa16.46■□□□□ 0.23
SPIDR-209ENST00000519141 USP31Q70CQ4 1352 aa16.46■□□□□ 0.23
SPIDR-209ENST00000519141 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
SPIDR-209ENST00000519141 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
SPIDR-209ENST00000519141 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
SPIDR-209ENST00000519141 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
SPIDR-209ENST00000519141 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
SPIDR-209ENST00000519141 ORAI2Q96SN7 254 aa16.43■□□□□ 0.22
SPIDR-209ENST00000519141 PSME1Q06323 249 aa16.43■□□□□ 0.22
SPIDR-209ENST00000519141 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
SPIDR-209ENST00000519141 PAK3O75914 559 aaPredicted RBP16.42■□□□□ 0.22
SPIDR-209ENST00000519141 FBLN1P23142 703 aa16.42■□□□□ 0.22
SPIDR-209ENST00000519141 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
SPIDR-209ENST00000519141 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
SPIDR-209ENST00000519141 TRPM3Q9HCF6 1732 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-209ENST00000519141 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
SPIDR-209ENST00000519141 NLRP6P59044 892 aa16.41■□□□□ 0.22
SPIDR-209ENST00000519141 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
SPIDR-209ENST00000519141 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
SPIDR-209ENST00000519141 BRINP3Q76B58 766 aa16.4■□□□□ 0.22
SPIDR-209ENST00000519141 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
SPIDR-209ENST00000519141 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
SPIDR-209ENST00000519141 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
SPIDR-209ENST00000519141 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
SPIDR-209ENST00000519141 RRS1Q15050 365 aaKnown RBP16.4■□□□□ 0.22
SPIDR-209ENST00000519141 FOXO3O43524 673 aa16.39■□□□□ 0.21
SPIDR-209ENST00000519141 PEAK1Q9H792 1746 aa16.38■□□□□ 0.21
SPIDR-209ENST00000519141 PDE3BQ13370 1112 aa16.38■□□□□ 0.21
SPIDR-209ENST00000519141 RUNDC1Q96C34 613 aa16.38■□□□□ 0.21
SPIDR-209ENST00000519141 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
SPIDR-209ENST00000519141 COL16A1Q07092 1604 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-209ENST00000519141 APAF1O14727 1248 aa16.37■□□□□ 0.21
SPIDR-209ENST00000519141 SOX12O15370 315 aa16.37■□□□□ 0.21
SPIDR-209ENST00000519141 NGEFQ8N5V2 710 aa16.37■□□□□ 0.21
SPIDR-209ENST00000519141 AHDC1Q5TGY3 1603 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-209ENST00000519141 NUTM2GQ5VZR2 741 aa16.36■□□□□ 0.21
SPIDR-209ENST00000519141 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
SPIDR-209ENST00000519141 JCADQ9P266 1359 aa16.35■□□□□ 0.21
SPIDR-209ENST00000519141 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
SPIDR-209ENST00000519141 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
SPIDR-209ENST00000519141 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
SPIDR-209ENST00000519141 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
SPIDR-209ENST00000519141 LTN1O94822 1766 aa16.34■□□□□ 0.21
SPIDR-209ENST00000519141 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
SPIDR-209ENST00000519141 FLT4P35916 1363 aa16.34■□□□□ 0.21
SPIDR-209ENST00000519141 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
SPIDR-209ENST00000519141 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.21
SPIDR-209ENST00000519141 NFAT5O94916 1531 aa16.33■□□□□ 0.2
SPIDR-209ENST00000519141 IL13P35225 146 aa16.33■□□□□ 0.2
SPIDR-209ENST00000519141 RGS17Q9UGC6 210 aaPredicted RBP16.33■□□□□ 0.2
SPIDR-209ENST00000519141 KIF24Q5T7B8 1368 aa16.33■□□□□ 0.2
SPIDR-209ENST00000519141 TCP11L2Q8N4U5 519 aa16.32■□□□□ 0.2
SPIDR-209ENST00000519141 MAPK8IP3Q9UPT6 1336 aa16.32■□□□□ 0.2
SPIDR-209ENST00000519141 SLIT3O75094 1523 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms