RNA–Protein interactions for RNA: ENST00000519138.1

MCM4-206, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-206ENST00000519138 NRAPQ86VF7 1730 aa18.07■□□□□ 0.48
MCM4-206ENST00000519138 NWD2Q9ULI1 1742 aa18.07■□□□□ 0.48
MCM4-206ENST00000519138 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
MCM4-206ENST00000519138 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
MCM4-206ENST00000519138 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
MCM4-206ENST00000519138 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
MCM4-206ENST00000519138 ACEP12821 1306 aa18.06■□□□□ 0.48
MCM4-206ENST00000519138 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
MCM4-206ENST00000519138 SRPK2P78362 688 aaKnown RBP18.05■□□□□ 0.48
MCM4-206ENST00000519138 CCDC9Q9Y3X0 531 aaKnown RBP18.04■□□□□ 0.48
MCM4-206ENST00000519138 EP400Q96L91 3159 aa18.03■□□□□ 0.48
MCM4-206ENST00000519138 ROCK2O75116 1388 aaKnown RBP18.03■□□□□ 0.48
MCM4-206ENST00000519138 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.48
MCM4-206ENST00000519138 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
MCM4-206ENST00000519138 CCDC61Q9Y6R9 512 aa18.02■□□□□ 0.48
MCM4-206ENST00000519138 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
MCM4-206ENST00000519138 BTG4Q9NY30 223 aa18.01■□□□□ 0.47
MCM4-206ENST00000519138 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
MCM4-206ENST00000519138 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
MCM4-206ENST00000519138 ATAD2Q6PL18 1390 aa18■□□□□ 0.47
MCM4-206ENST00000519138 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
MCM4-206ENST00000519138 ZC3H6P61129 1189 aaKnown RBP17.99■□□□□ 0.47
MCM4-206ENST00000519138 VPS72Q15906 364 aa17.99■□□□□ 0.47
MCM4-206ENST00000519138 KIAA0232Q92628 1395 aa17.97■□□□□ 0.47
MCM4-206ENST00000519138 SEPT12Q8IYM1 358 aa17.97■□□□□ 0.47
MCM4-206ENST00000519138 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
MCM4-206ENST00000519138 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
MCM4-206ENST00000519138 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
MCM4-206ENST00000519138 FAM98CQ17RN3 349 aaKnown RBP17.95■□□□□ 0.46
MCM4-206ENST00000519138 ABTB2Q8N961 1025 aa17.95■□□□□ 0.46
MCM4-206ENST00000519138 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
MCM4-206ENST00000519138 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
MCM4-206ENST00000519138 A0A0G2JS52 829 aa17.94■□□□□ 0.46
MCM4-206ENST00000519138 MYT1Q01538 1121 aa17.94■□□□□ 0.46
MCM4-206ENST00000519138 STRN4Q9NRL3 753 aa17.93■□□□□ 0.46
MCM4-206ENST00000519138 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
MCM4-206ENST00000519138 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
MCM4-206ENST00000519138 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
MCM4-206ENST00000519138 FAM182BQ5T319 152 aa17.92■□□□□ 0.46
MCM4-206ENST00000519138 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
MCM4-206ENST00000519138 USP6P35125 1406 aa17.9■□□□□ 0.46
MCM4-206ENST00000519138 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.45
MCM4-206ENST00000519138 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
MCM4-206ENST00000519138 CAMTA1Q9Y6Y1 1673 aa17.89■□□□□ 0.45
MCM4-206ENST00000519138 RGPD5Q99666 1765 aa17.89■□□□□ 0.45
MCM4-206ENST00000519138 LMO7Q8WWI1 1683 aa17.88■□□□□ 0.45
MCM4-206ENST00000519138 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
MCM4-206ENST00000519138 KRT27Q7Z3Y8 459 aa17.88■□□□□ 0.45
MCM4-206ENST00000519138 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
MCM4-206ENST00000519138 USP19O94966 1318 aa17.88■□□□□ 0.45
MCM4-206ENST00000519138 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
MCM4-206ENST00000519138 DEFB132Q7Z7B7 95 aa17.87■□□□□ 0.45
MCM4-206ENST00000519138 SOX12O15370 315 aa17.86■□□□□ 0.45
MCM4-206ENST00000519138 GCP02774 474 aa17.86■□□□□ 0.45
MCM4-206ENST00000519138 NLRP6P59044 892 aa17.86■□□□□ 0.45
MCM4-206ENST00000519138 SSH2Q76I76 1423 aa17.86■□□□□ 0.45
MCM4-206ENST00000519138 LARP1Q6PKG0 1096 aaKnown RBP17.85■□□□□ 0.45
MCM4-206ENST00000519138 MON2Q7Z3U7 1717 aa17.85■□□□□ 0.45
MCM4-206ENST00000519138 NLRP13Q86W25 1043 aa17.85■□□□□ 0.45
MCM4-206ENST00000519138 SPATA31A1Q5TZJ5 1347 aa17.84■□□□□ 0.45
MCM4-206ENST00000519138 EVA1CP58658 441 aa17.84■□□□□ 0.45
MCM4-206ENST00000519138 ZRANB1Q9UGI0 708 aa17.84■□□□□ 0.45
MCM4-206ENST00000519138 SLIT3O75094 1523 aa17.83■□□□□ 0.45
MCM4-206ENST00000519138 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.44
MCM4-206ENST00000519138 COL18A1P39060 1754 aa17.83■□□□□ 0.44
MCM4-206ENST00000519138 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
MCM4-206ENST00000519138 CPDO75976 1380 aa17.81■□□□□ 0.44
MCM4-206ENST00000519138 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
MCM4-206ENST00000519138 PCGF6Q9BYE7 350 aa17.81■□□□□ 0.44
MCM4-206ENST00000519138 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
MCM4-206ENST00000519138 CPSF1Q10570 1443 aaKnown RBP17.81■□□□□ 0.44
MCM4-206ENST00000519138 KTN1Q86UP2 1357 aaKnown RBP17.8■□□□□ 0.44
MCM4-206ENST00000519138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.44
MCM4-206ENST00000519138 COL5A2P05997 1499 aaPredicted RBP17.8■□□□□ 0.44
MCM4-206ENST00000519138 SLC12A5Q9H2X9 1139 aa17.79■□□□□ 0.44
MCM4-206ENST00000519138 TNS1Q9HBL0 1735 aaKnown RBP17.78■□□□□ 0.44
MCM4-206ENST00000519138 ST20-MTHFSA0A0A6YYL1 179 aa17.78■□□□□ 0.44
MCM4-206ENST00000519138 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
MCM4-206ENST00000519138 SBNO2Q9Y2G9 1366 aa17.78■□□□□ 0.44
MCM4-206ENST00000519138 NME9Q86XW9 330 aa17.77■□□□□ 0.44
MCM4-206ENST00000519138 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
MCM4-206ENST00000519138 AXIN2Q9Y2T1 843 aa17.77■□□□□ 0.44
MCM4-206ENST00000519138 RGPD1P0DJD0 1748 aa17.77■□□□□ 0.44
MCM4-206ENST00000519138 SF3B2Q13435 895 aaKnown RBP17.76■□□□□ 0.43
MCM4-206ENST00000519138 ZNF692Q9BU19 519 aaPredicted RBP17.76■□□□□ 0.43
MCM4-206ENST00000519138 TESK2Q96S53 571 aa17.75■□□□□ 0.43
MCM4-206ENST00000519138 NFAT5O94916 1531 aa17.75■□□□□ 0.43
MCM4-206ENST00000519138 LTN1O94822 1766 aa17.75■□□□□ 0.43
MCM4-206ENST00000519138 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
MCM4-206ENST00000519138 TCP11L2Q8N4U5 519 aa17.74■□□□□ 0.43
MCM4-206ENST00000519138 TTC21AQ8NDW8 1320 aa17.73■□□□□ 0.43
MCM4-206ENST00000519138 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
MCM4-206ENST00000519138 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
MCM4-206ENST00000519138 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
MCM4-206ENST00000519138 AATKQ6ZMQ8 1374 aa17.72■□□□□ 0.43
MCM4-206ENST00000519138 TRIM37O94972 964 aa17.72■□□□□ 0.43
MCM4-206ENST00000519138 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
MCM4-206ENST00000519138 USP54Q70EL1 1684 aa17.71■□□□□ 0.43
MCM4-206ENST00000519138 BARGINQ6ZT62 677 aa17.71■□□□□ 0.43
MCM4-206ENST00000519138 TOM1L2Q6ZVM7 507 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms