RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
TTC1-202ENST00000518560 DOK7Q18PE1 504 aa14.52□□□□□ -0.09
TTC1-202ENST00000518560 SPOCK2Q92563 424 aa14.52□□□□□ -0.09
TTC1-202ENST00000518560 METP08581 1390 aa14.5□□□□□ -0.09
TTC1-202ENST00000518560 NALCNQ8IZF0 1738 aa14.5□□□□□ -0.09
TTC1-202ENST00000518560 HOXB3P14651 431 aaPredicted RBP14.5□□□□□ -0.09
TTC1-202ENST00000518560 PIK3R4Q99570 1358 aa14.49□□□□□ -0.09
TTC1-202ENST00000518560 COL16A1Q07092 1604 aaPredicted RBP14.49□□□□□ -0.09
TTC1-202ENST00000518560 ERBB3P21860 1342 aa14.49□□□□□ -0.09
TTC1-202ENST00000518560 SOCS7O14512 581 aa14.49□□□□□ -0.09
TTC1-202ENST00000518560 HOXB1P14653 301 aaPredicted RBP14.49□□□□□ -0.09
TTC1-202ENST00000518560 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
TTC1-202ENST00000518560 AMOTL2Q9Y2J4 779 aa14.49□□□□□ -0.09
TTC1-202ENST00000518560 IFT172Q9UG01 1749 aa14.47□□□□□ -0.09
TTC1-202ENST00000518560 RIMBP2O15034 1052 aa14.47□□□□□ -0.09
TTC1-202ENST00000518560 SLAIN2Q9P270 581 aa14.46□□□□□ -0.09
TTC1-202ENST00000518560 NCOA3Q9Y6Q9 1424 aa14.45□□□□□ -0.1
TTC1-202ENST00000518560 AHDC1Q5TGY3 1603 aaPredicted RBP14.43□□□□□ -0.1
TTC1-202ENST00000518560 C19orf44Q9H6X5 657 aa14.41□□□□□ -0.1
TTC1-202ENST00000518560 RGS17Q9UGC6 210 aaPredicted RBP14.41□□□□□ -0.1
TTC1-202ENST00000518560 NHSL1Q5SYE7 1610 aa14.41□□□□□ -0.1
TTC1-202ENST00000518560 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
TTC1-202ENST00000518560 CCDC144AA2RUR9 1427 aa14.41□□□□□ -0.1
TTC1-202ENST00000518560 MST1RQ04912 1400 aa14.41□□□□□ -0.1
TTC1-202ENST00000518560 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
TTC1-202ENST00000518560 SHPRHQ149N8 1683 aa14.4□□□□□ -0.1
TTC1-202ENST00000518560 ATF3P18847 181 aa14.4□□□□□ -0.1
TTC1-202ENST00000518560 MPHOSPH9Q99550 1183 aa14.4□□□□□ -0.1
TTC1-202ENST00000518560 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
TTC1-202ENST00000518560 LRP6O75581 1613 aa14.39□□□□□ -0.11
TTC1-202ENST00000518560 DCCP43146 1447 aa14.39□□□□□ -0.11
TTC1-202ENST00000518560 SPATA31E1Q6ZUB1 1445 aa14.39□□□□□ -0.11
TTC1-202ENST00000518560 SETD5Q9C0A6 1442 aa14.39□□□□□ -0.11
TTC1-202ENST00000518560 ROBO2Q9HCK4 1378 aa14.38□□□□□ -0.11
TTC1-202ENST00000518560 BRINP3Q76B58 766 aa14.38□□□□□ -0.11
TTC1-202ENST00000518560 IFNLR1Q8IU57 520 aaPredicted RBP14.38□□□□□ -0.11
TTC1-202ENST00000518560 ADGRF5Q8IZF2 1346 aa14.38□□□□□ -0.11
TTC1-202ENST00000518560 JCADQ9P266 1359 aa14.37□□□□□ -0.11
TTC1-202ENST00000518560 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
TTC1-202ENST00000518560 RNF166Q96A37 237 aaPredicted RBP14.37□□□□□ -0.11
TTC1-202ENST00000518560 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
TTC1-202ENST00000518560 RAB3GAP2Q9H2M9 1393 aa14.36□□□□□ -0.11
TTC1-202ENST00000518560 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
TTC1-202ENST00000518560 RPGRIP1LQ68CZ1 1315 aa14.36□□□□□ -0.11
TTC1-202ENST00000518560 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
TTC1-202ENST00000518560 EFCAB3Q8N7B9 438 aa14.35□□□□□ -0.11
TTC1-202ENST00000518560 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
TTC1-202ENST00000518560 KNDC1Q76NI1 1749 aa14.35□□□□□ -0.11
TTC1-202ENST00000518560 POTEAQ6S8J7 498 aa14.34□□□□□ -0.11
TTC1-202ENST00000518560 PRAG1Q86YV5 1406 aa14.33□□□□□ -0.11
TTC1-202ENST00000518560 C1orf167Q5SNV9 1468 aa14.32□□□□□ -0.12
TTC1-202ENST00000518560 ZSWIM6Q9HCJ5 1215 aa14.31□□□□□ -0.12
TTC1-202ENST00000518560 PIK3C2GO75747 1445 aa14.31□□□□□ -0.12
TTC1-202ENST00000518560 CDC42BPGQ6DT37 1551 aa14.3□□□□□ -0.12
TTC1-202ENST00000518560 LAMC1P11047 1609 aa14.3□□□□□ -0.12
TTC1-202ENST00000518560 TMEM132EQ6IEE7 984 aa14.29□□□□□ -0.12
TTC1-202ENST00000518560 STK26Q9P289 416 aa14.29□□□□□ -0.12
TTC1-202ENST00000518560 ANKRD30BQ9BXX2 1392 aa14.29□□□□□ -0.12
TTC1-202ENST00000518560 NUTM2BA6NNL0 878 aaPredicted RBP14.28□□□□□ -0.12
TTC1-202ENST00000518560 NUTM2EB1AL46 878 aaPredicted RBP14.28□□□□□ -0.12
TTC1-202ENST00000518560 NUTM2AQ8IVF1 878 aaPredicted RBP14.28□□□□□ -0.12
TTC1-202ENST00000518560 ORAI2Q96SN7 254 aa14.28□□□□□ -0.12
TTC1-202ENST00000518560 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
TTC1-202ENST00000518560 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.12
TTC1-202ENST00000518560 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.12
TTC1-202ENST00000518560 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
TTC1-202ENST00000518560 MICALL2Q8IY33 904 aa14.27□□□□□ -0.13
TTC1-202ENST00000518560 MYOM2P54296 1465 aa14.26□□□□□ -0.13
TTC1-202ENST00000518560 NRXN1Q9ULB1 1477 aa14.26□□□□□ -0.13
TTC1-202ENST00000518560 TECPR2O15040 1411 aa14.26□□□□□ -0.13
TTC1-202ENST00000518560 LRPPRCP42704 1394 aaKnown RBP14.26□□□□□ -0.13
TTC1-202ENST00000518560 PNPLA6Q8IY17 1366 aa14.26□□□□□ -0.13
TTC1-202ENST00000518560 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
TTC1-202ENST00000518560 WAPLQ7Z5K2 1190 aa14.26□□□□□ -0.13
TTC1-202ENST00000518560 ZNF687Q8N1G0 1237 aa14.26□□□□□ -0.13
TTC1-202ENST00000518560 YTHDC2Q9H6S0 1430 aaKnown RBP14.24□□□□□ -0.13
TTC1-202ENST00000518560 NUTM2FA1L443 756 aa14.24□□□□□ -0.13
TTC1-202ENST00000518560 CFAP70Q5T0N1 1121 aa14.23□□□□□ -0.13
TTC1-202ENST00000518560 SOX12O15370 315 aa14.22□□□□□ -0.13
TTC1-202ENST00000518560 ABCC11Q96J66 1382 aa14.22□□□□□ -0.13
TTC1-202ENST00000518560 PXDNQ92626 1479 aa14.2□□□□□ -0.14
TTC1-202ENST00000518560 COL22A1Q8NFW1 1626 aaPredicted RBP14.2□□□□□ -0.14
TTC1-202ENST00000518560 PTGER2P43116 358 aa14.2□□□□□ -0.14
TTC1-202ENST00000518560 XPCQ01831 940 aaPredicted RBP14.2□□□□□ -0.14
TTC1-202ENST00000518560 TMEM92Q6UXU6 159 aa14.2□□□□□ -0.14
TTC1-202ENST00000518560 LRRC59Q96AG4 307 aaKnown RBP14.2□□□□□ -0.14
TTC1-202ENST00000518560 ADGRB1O14514 1584 aa14.2□□□□□ -0.14
TTC1-202ENST00000518560 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
TTC1-202ENST00000518560 ESCO1Q5FWF5 840 aa14.19□□□□□ -0.14
TTC1-202ENST00000518560 GPR153Q6NV75 609 aa14.19□□□□□ -0.14
TTC1-202ENST00000518560 C14orf93Q9H972 538 aaKnown RBP14.19□□□□□ -0.14
TTC1-202ENST00000518560 KIF1AQ12756 1690 aa14.19□□□□□ -0.14
TTC1-202ENST00000518560 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
TTC1-202ENST00000518560 AFF2P51816 1311 aa14.18□□□□□ -0.14
TTC1-202ENST00000518560 SOS2Q07890 1332 aaPredicted RBP14.18□□□□□ -0.14
TTC1-202ENST00000518560 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
TTC1-202ENST00000518560 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
TTC1-202ENST00000518560 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
TTC1-202ENST00000518560 C8orf37Q96NL8 207 aa14.17□□□□□ -0.14
TTC1-202ENST00000518560 ARHGEF28Q8N1W1 1705 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms