RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
SRGAP3-211ENST00000518265 STRCP1A6NGW2 1772 aa11.12□□□□□ -0.63
SRGAP3-211ENST00000518265 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 PKNOX2Q96KN3 472 aa11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 YTHDC2Q9H6S0 1430 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 KNDC1Q76NI1 1749 aa11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-211ENST00000518265 PLEKHH1Q9ULM0 1364 aa11.1□□□□□ -0.63
SRGAP3-211ENST00000518265 RGPD8O14715 1765 aaPredicted RBP11.1□□□□□ -0.63
SRGAP3-211ENST00000518265 DISP3Q9P2K9 1392 aa11.1□□□□□ -0.63
SRGAP3-211ENST00000518265 WASHC2AQ641Q2 1341 aa11.09□□□□□ -0.63
SRGAP3-211ENST00000518265 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
SRGAP3-211ENST00000518265 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
SRGAP3-211ENST00000518265 AK7Q96M32 723 aa11.09□□□□□ -0.63
SRGAP3-211ENST00000518265 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
SRGAP3-211ENST00000518265 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.09□□□□□ -0.63
SRGAP3-211ENST00000518265 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-211ENST00000518265 TESK2Q96S53 571 aa11.08□□□□□ -0.64
SRGAP3-211ENST00000518265 MED14O60244 1454 aa11.08□□□□□ -0.64
SRGAP3-211ENST00000518265 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-211ENST00000518265 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
SRGAP3-211ENST00000518265 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
SRGAP3-211ENST00000518265 MINK1Q8N4C8 1332 aaPredicted RBP11.07□□□□□ -0.64
SRGAP3-211ENST00000518265 MYOM1P52179 1685 aa11.07□□□□□ -0.64
SRGAP3-211ENST00000518265 XRN1Q8IZH2 1706 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-211ENST00000518265 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
SRGAP3-211ENST00000518265 CNGB1Q14028 1251 aaPredicted RBP11.06□□□□□ -0.64
SRGAP3-211ENST00000518265 DIP2AQ14689 1571 aa11.06□□□□□ -0.64
SRGAP3-211ENST00000518265 CENPJQ9HC77 1338 aaPredicted RBP11.06□□□□□ -0.64
SRGAP3-211ENST00000518265 CCDC7Q96M83 1385 aa11.06□□□□□ -0.64
SRGAP3-211ENST00000518265 ROBO2Q9HCK4 1378 aa11.06□□□□□ -0.64
SRGAP3-211ENST00000518265 POGKQ9P215 609 aa11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 AMOTL2Q9Y2J4 779 aa11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 CPS1P31327 1500 aa11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 TULP4Q9NRJ4 1543 aa11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 LRPPRCP42704 1394 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 PDE4CQ08493 712 aa11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 FBXO22Q8NEZ5 403 aa11.05□□□□□ -0.64
SRGAP3-211ENST00000518265 EIF3AQ14152 1382 aaKnown RBP11.04□□□□□ -0.64
SRGAP3-211ENST00000518265 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
SRGAP3-211ENST00000518265 KCNA6P17658 529 aa11.04□□□□□ -0.64
SRGAP3-211ENST00000518265 DIEXFQ68CQ4 756 aaKnown RBP11.04□□□□□ -0.64
SRGAP3-211ENST00000518265 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
SRGAP3-211ENST00000518265 NEFLP07196 543 aa11.03□□□□□ -0.64
SRGAP3-211ENST00000518265 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
SRGAP3-211ENST00000518265 MLLT3P42568 568 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-211ENST00000518265 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-211ENST00000518265 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
SRGAP3-211ENST00000518265 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-211ENST00000518265 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-211ENST00000518265 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
SRGAP3-211ENST00000518265 PSEN1P49768 467 aa11.02□□□□□ -0.65
SRGAP3-211ENST00000518265 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
SRGAP3-211ENST00000518265 DLC1Q96QB1 1528 aa11.01□□□□□ -0.65
SRGAP3-211ENST00000518265 TMF1P82094 1093 aa11.01□□□□□ -0.65
SRGAP3-211ENST00000518265 ABCC11Q96J66 1382 aa11.01□□□□□ -0.65
SRGAP3-211ENST00000518265 TRIM66O15016 1216 aa11□□□□□ -0.65
SRGAP3-211ENST00000518265 PDE4DQ08499 809 aa11□□□□□ -0.65
SRGAP3-211ENST00000518265 GPIHBP1Q8IV16 184 aa11□□□□□ -0.65
SRGAP3-211ENST00000518265 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
SRGAP3-211ENST00000518265 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
SRGAP3-211ENST00000518265 APBB1O00213 710 aa11□□□□□ -0.65
SRGAP3-211ENST00000518265 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
SRGAP3-211ENST00000518265 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
SRGAP3-211ENST00000518265 TECPR2O15040 1411 aa10.98□□□□□ -0.65
SRGAP3-211ENST00000518265 ZNF335Q9H4Z2 1342 aaPredicted RBP10.98□□□□□ -0.65
SRGAP3-211ENST00000518265 SRPK2P78362 688 aaKnown RBP10.98□□□□□ -0.65
SRGAP3-211ENST00000518265 NWD1Q149M9 1564 aa10.98□□□□□ -0.65
SRGAP3-211ENST00000518265 CDK19Q9BWU1 502 aa10.98□□□□□ -0.65
SRGAP3-211ENST00000518265 USP32Q8NFA0 1604 aa10.97□□□□□ -0.65
SRGAP3-211ENST00000518265 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
SRGAP3-211ENST00000518265 ANP32EQ9BTT0 268 aa10.97□□□□□ -0.65
SRGAP3-211ENST00000518265 ITSN1Q15811 1721 aa10.96□□□□□ -0.66
SRGAP3-211ENST00000518265 FMN2Q9NZ56 1722 aa10.96□□□□□ -0.66
SRGAP3-211ENST00000518265 EVC2Q86UK5 1308 aa10.96□□□□□ -0.66
SRGAP3-211ENST00000518265 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
SRGAP3-211ENST00000518265 FAM135BQ49AJ0 1406 aa10.95□□□□□ -0.66
SRGAP3-211ENST00000518265 MFSD10Q14728 455 aa10.95□□□□□ -0.66
SRGAP3-211ENST00000518265 PROSER2Q86WR7 435 aaPredicted RBP10.95□□□□□ -0.66
SRGAP3-211ENST00000518265 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
SRGAP3-211ENST00000518265 PANK3Q9H999 370 aa10.95□□□□□ -0.66
SRGAP3-211ENST00000518265 PIK3R4Q99570 1358 aa10.94□□□□□ -0.66
SRGAP3-211ENST00000518265 SBNO2Q9Y2G9 1366 aa10.94□□□□□ -0.66
SRGAP3-211ENST00000518265 ADGRB2O60241 1585 aa10.94□□□□□ -0.66
SRGAP3-211ENST00000518265 TOPAZ1Q8N9V7 1692 aa10.94□□□□□ -0.66
SRGAP3-211ENST00000518265 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 WASLO00401 505 aaPredicted RBP10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 NLRP6P59044 892 aa10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 ARIH1Q9Y4X5 557 aaPredicted RBP10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
SRGAP3-211ENST00000518265 TAF7LQ5H9L4 462 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms