RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 XRN1Q8IZH2 1706 aaKnown RBP7.7□□□□□ -1.18
PVT1-205ENST00000517790 ONECUT3O60422 494 aaPredicted RBP7.7□□□□□ -1.18
PVT1-205ENST00000517790 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
PVT1-205ENST00000517790 SGIP1Q9BQI5 828 aa7.7□□□□□ -1.18
PVT1-205ENST00000517790 CHIC2Q9UKJ5 165 aa7.7□□□□□ -1.18
PVT1-205ENST00000517790 PIK3R4Q99570 1358 aa7.7□□□□□ -1.18
PVT1-205ENST00000517790 UNC13BO14795 1591 aa7.69□□□□□ -1.18
PVT1-205ENST00000517790 YY1P25490 414 aa7.69□□□□□ -1.18
PVT1-205ENST00000517790 KANK4Q5T7N3 995 aaPredicted RBP7.69□□□□□ -1.18
PVT1-205ENST00000517790 SMYD5Q6GMV2 418 aa7.69□□□□□ -1.18
PVT1-205ENST00000517790 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.69□□□□□ -1.18
PVT1-205ENST00000517790 GJD4Q96KN9 370 aaPredicted RBP7.69□□□□□ -1.18
PVT1-205ENST00000517790 ORAI2Q96SN7 254 aa7.69□□□□□ -1.18
PVT1-205ENST00000517790 PTCH1Q13635 1447 aa7.69□□□□□ -1.18
PVT1-205ENST00000517790 GLI3P10071 1580 aa7.68□□□□□ -1.18
PVT1-205ENST00000517790 NRXN3Q9Y4C0 1643 aa7.68□□□□□ -1.18
PVT1-205ENST00000517790 MARF1Q9Y4F3 1742 aaKnown RBP7.68□□□□□ -1.18
PVT1-205ENST00000517790 SOS2Q07890 1332 aaPredicted RBP7.68□□□□□ -1.18
PVT1-205ENST00000517790 ADGRL3Q9HAR2 1447 aa7.68□□□□□ -1.18
PVT1-205ENST00000517790 C1orf167Q5SNV9 1468 aa7.68□□□□□ -1.18
PVT1-205ENST00000517790 RALGAPBQ86X10 1494 aa7.68□□□□□ -1.18
PVT1-205ENST00000517790 LAMC1P11047 1609 aa7.67□□□□□ -1.18
PVT1-205ENST00000517790 SF3B2Q13435 895 aaKnown RBP7.67□□□□□ -1.18
PVT1-205ENST00000517790 METP08581 1390 aa7.67□□□□□ -1.18
PVT1-205ENST00000517790 DAPK1P53355 1430 aa7.67□□□□□ -1.18
PVT1-205ENST00000517790 MYOM2P54296 1465 aa7.67□□□□□ -1.18
PVT1-205ENST00000517790 COL22A1Q8NFW1 1626 aaPredicted RBP7.67□□□□□ -1.18
PVT1-205ENST00000517790 PDE4DQ08499 809 aa7.66□□□□□ -1.18
PVT1-205ENST00000517790 R3HDM1Q15032 1099 aaKnown RBP7.66□□□□□ -1.18
PVT1-205ENST00000517790 CLUAP1Q96AJ1 413 aa7.66□□□□□ -1.18
PVT1-205ENST00000517790 SERPINA10Q9UK55 444 aa7.66□□□□□ -1.18
PVT1-205ENST00000517790 RPRD2Q5VT52 1461 aaKnown RBP7.66□□□□□ -1.18
PVT1-205ENST00000517790 ZNF316A6NFI3 1004 aaPredicted RBP7.65□□□□□ -1.18
PVT1-205ENST00000517790 TRIM66O15016 1216 aa7.65□□□□□ -1.18
PVT1-205ENST00000517790 XPCQ01831 940 aaPredicted RBP7.65□□□□□ -1.18
PVT1-205ENST00000517790 SEPT12Q8IYM1 358 aa7.65□□□□□ -1.18
PVT1-205ENST00000517790 PTPN23Q9H3S7 1636 aa7.65□□□□□ -1.18
PVT1-205ENST00000517790 USP35Q9P2H5 1018 aa7.65□□□□□ -1.18
PVT1-205ENST00000517790 STK24Q9Y6E0 443 aa7.65□□□□□ -1.18
PVT1-205ENST00000517790 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.64□□□□□ -1.19
PVT1-205ENST00000517790 ANKRD30AQ9BXX3 1397 aa7.64□□□□□ -1.19
PVT1-205ENST00000517790 E2F4Q16254 413 aa7.64□□□□□ -1.19
PVT1-205ENST00000517790 FAM117AQ9C073 453 aa7.64□□□□□ -1.19
PVT1-205ENST00000517790 BCL11BQ9C0K0 894 aaPredicted RBP7.64□□□□□ -1.19
PVT1-205ENST00000517790 E9PCH4 1651 aa7.63□□□□□ -1.19
PVT1-205ENST00000517790 BRD2P25440 801 aaKnown RBP7.63□□□□□ -1.19
PVT1-205ENST00000517790 EN1Q05925 392 aaPredicted RBP7.63□□□□□ -1.19
PVT1-205ENST00000517790 UNC5CLQ8IV45 518 aa7.63□□□□□ -1.19
PVT1-205ENST00000517790 KRI1Q8N9T8 703 aaKnown RBP7.63□□□□□ -1.19
PVT1-205ENST00000517790 RETREG2Q8NC44 543 aa7.63□□□□□ -1.19
PVT1-205ENST00000517790 SPHKAPQ2M3C7 1700 aa7.63□□□□□ -1.19
PVT1-205ENST00000517790 IRF5Q13568 498 aa7.62□□□□□ -1.19
PVT1-205ENST00000517790 FBXW7Q969H0 707 aa7.62□□□□□ -1.19
PVT1-205ENST00000517790 CCDC97Q96F63 343 aaPredicted RBP7.62□□□□□ -1.19
PVT1-205ENST00000517790 SLIT2O94813 1529 aa7.62□□□□□ -1.19
PVT1-205ENST00000517790 PXDNQ92626 1479 aa7.62□□□□□ -1.19
PVT1-205ENST00000517790 BAG6P46379 1132 aa7.61□□□□□ -1.19
PVT1-205ENST00000517790 FAM182BQ5T319 152 aa7.61□□□□□ -1.19
PVT1-205ENST00000517790 IFFO2Q5TF58 517 aa7.61□□□□□ -1.19
PVT1-205ENST00000517790 KRT27Q7Z3Y8 459 aa7.61□□□□□ -1.19
PVT1-205ENST00000517790 FAM177A1Q8N128 213 aaPredicted RBP7.61□□□□□ -1.19
PVT1-205ENST00000517790 BCL11AQ9H165 835 aa7.61□□□□□ -1.19
PVT1-205ENST00000517790 ROBO2Q9HCK4 1378 aa7.6□□□□□ -1.19
PVT1-205ENST00000517790 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
PVT1-205ENST00000517790 FOXO3O43524 673 aa7.6□□□□□ -1.19
PVT1-205ENST00000517790 ANKRD50Q9ULJ7 1429 aa7.6□□□□□ -1.19
PVT1-205ENST00000517790 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.59□□□□□ -1.19
PVT1-205ENST00000517790 ESCO1Q5FWF5 840 aa7.59□□□□□ -1.19
PVT1-205ENST00000517790 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
PVT1-205ENST00000517790 ZFP91Q96JP5 570 aaPredicted RBP7.59□□□□□ -1.19
PVT1-205ENST00000517790 NPHP3Q7Z494 1330 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 PLCH1Q4KWH8 1693 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 CAMTA1Q9Y6Y1 1673 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 A0A0G2JS52 829 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 NUTM2FA1L443 756 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 PATL2C9JE40 543 aaKnown RBP7.58□□□□□ -1.2
PVT1-205ENST00000517790 VPS72Q15906 364 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 ZNF326Q5BKZ1 582 aaKnown RBP7.58□□□□□ -1.2
PVT1-205ENST00000517790 CABLES1Q8TDN4 633 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 GOPCQ9HD26 462 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 USP32Q8NFA0 1604 aa7.58□□□□□ -1.2
PVT1-205ENST00000517790 ADGRL2O95490 1459 aa7.57□□□□□ -1.2
PVT1-205ENST00000517790 IQGAP3Q86VI3 1631 aa7.57□□□□□ -1.2
PVT1-205ENST00000517790 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
PVT1-205ENST00000517790 EZH2Q15910 746 aaKnown RBP7.57□□□□□ -1.2
PVT1-205ENST00000517790 VPS8Q8N3P4 1428 aa7.57□□□□□ -1.2
PVT1-205ENST00000517790 RGPD1P0DJD0 1748 aa7.57□□□□□ -1.2
PVT1-205ENST00000517790 TNS1Q9HBL0 1735 aaKnown RBP7.57□□□□□ -1.2
PVT1-205ENST00000517790 FAM98CQ17RN3 349 aaKnown RBP7.56□□□□□ -1.2
PVT1-205ENST00000517790 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
PVT1-205ENST00000517790 NUBP1P53384 320 aa7.55□□□□□ -1.2
PVT1-205ENST00000517790 ZNF784Q8NCA9 323 aaPredicted RBP7.55□□□□□ -1.2
PVT1-205ENST00000517790 NEXMIFQ5QGS0 1516 aa7.55□□□□□ -1.2
PVT1-205ENST00000517790 NWD2Q9ULI1 1742 aa7.55□□□□□ -1.2
PVT1-205ENST00000517790 SPATA31A3Q5VYP0 1347 aa7.54□□□□□ -1.2
PVT1-205ENST00000517790 PDE4CQ08493 712 aa7.54□□□□□ -1.2
PVT1-205ENST00000517790 GPIHBP1Q8IV16 184 aa7.54□□□□□ -1.2
PVT1-205ENST00000517790 DHX37Q8IY37 1157 aaKnown RBP7.54□□□□□ -1.2
PVT1-205ENST00000517790 CAMKK2Q96RR4 588 aa7.54□□□□□ -1.2
PVT1-205ENST00000517790 ZNF692Q9BU19 519 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms