RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
MCM4-202ENST00000517709 USP21Q9UK80 565 aa17.07■□□□□ 0.32
MCM4-202ENST00000517709 TONSLQ96HA7 1378 aa17.06■□□□□ 0.32
MCM4-202ENST00000517709 RXRBP28702 533 aa17.06■□□□□ 0.32
MCM4-202ENST00000517709 PSME1Q06323 249 aa17.06■□□□□ 0.32
MCM4-202ENST00000517709 QTRT2Q9H974 415 aaKnown RBP17.06■□□□□ 0.32
MCM4-202ENST00000517709 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
MCM4-202ENST00000517709 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
MCM4-202ENST00000517709 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
MCM4-202ENST00000517709 ACEP12821 1306 aa17.03■□□□□ 0.32
MCM4-202ENST00000517709 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
MCM4-202ENST00000517709 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
MCM4-202ENST00000517709 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
MCM4-202ENST00000517709 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
MCM4-202ENST00000517709 USP6P35125 1406 aa17■□□□□ 0.31
MCM4-202ENST00000517709 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
MCM4-202ENST00000517709 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
MCM4-202ENST00000517709 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
MCM4-202ENST00000517709 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
MCM4-202ENST00000517709 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
MCM4-202ENST00000517709 THSD7AQ9UPZ6 1657 aa16.99■□□□□ 0.31
MCM4-202ENST00000517709 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
MCM4-202ENST00000517709 RGPD5Q99666 1765 aa16.98■□□□□ 0.31
MCM4-202ENST00000517709 SLIT3O75094 1523 aa16.98■□□□□ 0.31
MCM4-202ENST00000517709 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
MCM4-202ENST00000517709 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
MCM4-202ENST00000517709 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
MCM4-202ENST00000517709 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
MCM4-202ENST00000517709 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
MCM4-202ENST00000517709 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
MCM4-202ENST00000517709 COL18A1P39060 1754 aa16.97■□□□□ 0.31
MCM4-202ENST00000517709 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.31
MCM4-202ENST00000517709 KIAA0232Q92628 1395 aa16.95■□□□□ 0.3
MCM4-202ENST00000517709 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
MCM4-202ENST00000517709 USP19O94966 1318 aa16.95■□□□□ 0.3
MCM4-202ENST00000517709 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
MCM4-202ENST00000517709 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
MCM4-202ENST00000517709 CABP1Q9NZU7 370 aa16.94■□□□□ 0.3
MCM4-202ENST00000517709 MYOM1P52179 1685 aa16.94■□□□□ 0.3
MCM4-202ENST00000517709 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
MCM4-202ENST00000517709 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
MCM4-202ENST00000517709 LTN1O94822 1766 aa16.92■□□□□ 0.3
MCM4-202ENST00000517709 CPSF1Q10570 1443 aaKnown RBP16.92■□□□□ 0.3
MCM4-202ENST00000517709 NFAT5O94916 1531 aa16.91■□□□□ 0.3
MCM4-202ENST00000517709 CHRNA2Q15822 529 aa16.91■□□□□ 0.3
MCM4-202ENST00000517709 VPS72Q15906 364 aa16.9■□□□□ 0.3
MCM4-202ENST00000517709 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
MCM4-202ENST00000517709 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.3
MCM4-202ENST00000517709 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
MCM4-202ENST00000517709 ZC3H6P61129 1189 aaKnown RBP16.88■□□□□ 0.29
MCM4-202ENST00000517709 ABTB2Q8N961 1025 aa16.88■□□□□ 0.29
MCM4-202ENST00000517709 TESK2Q96S53 571 aa16.88■□□□□ 0.29
MCM4-202ENST00000517709 PRDM11Q9NQV5 511 aa16.88■□□□□ 0.29
MCM4-202ENST00000517709 CPDO75976 1380 aa16.87■□□□□ 0.29
MCM4-202ENST00000517709 USP47Q96K76 1375 aa16.87■□□□□ 0.29
MCM4-202ENST00000517709 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
MCM4-202ENST00000517709 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
MCM4-202ENST00000517709 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
MCM4-202ENST00000517709 A0A1W2PP64 1363 aa16.85■□□□□ 0.29
MCM4-202ENST00000517709 BRD4O60885 1362 aaPredicted RBP16.85■□□□□ 0.29
MCM4-202ENST00000517709 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
MCM4-202ENST00000517709 ST20-MTHFSA0A0A6YYL1 179 aa16.84■□□□□ 0.29
MCM4-202ENST00000517709 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
MCM4-202ENST00000517709 SPATA31A5Q5VU36 1347 aa16.84■□□□□ 0.29
MCM4-202ENST00000517709 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
MCM4-202ENST00000517709 SPATA31A7Q8IWB4 1347 aa16.84■□□□□ 0.29
MCM4-202ENST00000517709 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
MCM4-202ENST00000517709 RGPD1P0DJD0 1748 aa16.83■□□□□ 0.28
MCM4-202ENST00000517709 SEPT12Q8IYM1 358 aa16.83■□□□□ 0.28
MCM4-202ENST00000517709 FAM98CQ17RN3 349 aaKnown RBP16.82■□□□□ 0.28
MCM4-202ENST00000517709 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
MCM4-202ENST00000517709 GCP02774 474 aa16.81■□□□□ 0.28
MCM4-202ENST00000517709 SPATA31A1Q5TZJ5 1347 aa16.8■□□□□ 0.28
MCM4-202ENST00000517709 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
MCM4-202ENST00000517709 SLC12A5Q9H2X9 1139 aa16.8■□□□□ 0.28
MCM4-202ENST00000517709 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
MCM4-202ENST00000517709 OVOS2A0A0J9YW53 1432 aa16.79■□□□□ 0.28
MCM4-202ENST00000517709 OVOS2Q6IE36 1432 aa16.79■□□□□ 0.28
MCM4-202ENST00000517709 PEAK1Q9H792 1746 aa16.79■□□□□ 0.28
MCM4-202ENST00000517709 CLSPNQ9HAW4 1339 aa16.79■□□□□ 0.28
MCM4-202ENST00000517709 NLRP6P59044 892 aa16.79■□□□□ 0.28
MCM4-202ENST00000517709 NLRP13Q86W25 1043 aa16.79■□□□□ 0.28
MCM4-202ENST00000517709 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
MCM4-202ENST00000517709 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
MCM4-202ENST00000517709 SBF2Q86WG5 1849 aa16.78■□□□□ 0.28
MCM4-202ENST00000517709 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
MCM4-202ENST00000517709 NME9Q86XW9 330 aa16.78■□□□□ 0.28
MCM4-202ENST00000517709 ABCC6O95255 1503 aa16.78■□□□□ 0.28
MCM4-202ENST00000517709 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
MCM4-202ENST00000517709 SOX12O15370 315 aa16.77■□□□□ 0.28
MCM4-202ENST00000517709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
MCM4-202ENST00000517709 TMC1Q8TDI8 760 aa16.77■□□□□ 0.28
MCM4-202ENST00000517709 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.27
MCM4-202ENST00000517709 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
MCM4-202ENST00000517709 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
MCM4-202ENST00000517709 FAM182BQ5T319 152 aa16.76■□□□□ 0.27
MCM4-202ENST00000517709 A0A0G2JS52 829 aa16.75■□□□□ 0.27
MCM4-202ENST00000517709 MYT1Q01538 1121 aa16.75■□□□□ 0.27
MCM4-202ENST00000517709 BLMP54132 1417 aaPredicted RBP16.75■□□□□ 0.27
MCM4-202ENST00000517709 KRT27Q7Z3Y8 459 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms