RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 FKBPLQ9UIM3 349 aa9.73□□□□□ -0.85
CTNNA1-202ENST00000517533 PPP1R15AO75807 674 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-202ENST00000517533 NR1H3Q13133 447 aa9.72□□□□□ -0.85
CTNNA1-202ENST00000517533 MSS51Q4VC12 460 aa9.72□□□□□ -0.85
CTNNA1-202ENST00000517533 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
CTNNA1-202ENST00000517533 CARNS1A5YM72 827 aa9.71□□□□□ -0.86
CTNNA1-202ENST00000517533 PIK3CDO00329 1044 aa9.71□□□□□ -0.86
CTNNA1-202ENST00000517533 MMP16P51512 607 aa9.71□□□□□ -0.86
CTNNA1-202ENST00000517533 PBXIP1Q96AQ6 731 aa9.71□□□□□ -0.86
CTNNA1-202ENST00000517533 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-202ENST00000517533 SPSB2Q99619 263 aa9.71□□□□□ -0.86
CTNNA1-202ENST00000517533 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
CTNNA1-202ENST00000517533 LMOD1P29536 600 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-202ENST00000517533 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
CTNNA1-202ENST00000517533 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
CTNNA1-202ENST00000517533 EVA1BQ9NVM1 165 aa9.69□□□□□ -0.86
CTNNA1-202ENST00000517533 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-202ENST00000517533 CCNYL3P0C7X3 344 aa9.68□□□□□ -0.86
CTNNA1-202ENST00000517533 CTHP32929 405 aa9.68□□□□□ -0.86
CTNNA1-202ENST00000517533 SOX11P35716 441 aa9.68□□□□□ -0.86
CTNNA1-202ENST00000517533 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
CTNNA1-202ENST00000517533 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-202ENST00000517533 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
CTNNA1-202ENST00000517533 MTRQ99707 1265 aa9.67□□□□□ -0.86
CTNNA1-202ENST00000517533 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
CTNNA1-202ENST00000517533 CCDC9Q9Y3X0 531 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-202ENST00000517533 ZPR1O75312 459 aa9.66□□□□□ -0.86
CTNNA1-202ENST00000517533 FAM174AQ8TBP5 190 aa9.66□□□□□ -0.86
CTNNA1-202ENST00000517533 ZBTB7CA1YPR0 619 aa9.65□□□□□ -0.86
CTNNA1-202ENST00000517533 EIF4G2P78344 907 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTNNA1-202ENST00000517533 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.86
CTNNA1-202ENST00000517533 ADH1BP00325 375 aa9.64□□□□□ -0.87
CTNNA1-202ENST00000517533 ZC3H4Q9UPT8 1303 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-202ENST00000517533 ATP9BO43861 1147 aa9.63□□□□□ -0.87
CTNNA1-202ENST00000517533 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
CTNNA1-202ENST00000517533 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
CTNNA1-202ENST00000517533 PTPN5P54829 565 aa9.62□□□□□ -0.87
CTNNA1-202ENST00000517533 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-202ENST00000517533 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
CTNNA1-202ENST00000517533 ACIN1Q9UKV3 1341 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-202ENST00000517533 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
CTNNA1-202ENST00000517533 TMEM88BA6NKF7 163 aa9.6□□□□□ -0.87
CTNNA1-202ENST00000517533 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
CTNNA1-202ENST00000517533 ATG7O95352 703 aa9.59□□□□□ -0.87
CTNNA1-202ENST00000517533 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
CTNNA1-202ENST00000517533 PHTF2Q8N3S3 785 aa9.59□□□□□ -0.87
CTNNA1-202ENST00000517533 CEP126Q9P2H0 1117 aa9.59□□□□□ -0.87
CTNNA1-202ENST00000517533 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
CTNNA1-202ENST00000517533 DEPDC4Q8N2C3 294 aa9.58□□□□□ -0.88
CTNNA1-202ENST00000517533 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
CTNNA1-202ENST00000517533 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
CTNNA1-202ENST00000517533 USP17L3A6NCW0 530 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 USP17L4A6NCW7 530 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 S1PR4O95977 384 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 SKIP12755 728 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 PTK2Q05397 1052 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 USP17L2Q6R6M4 530 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 NYAP1Q6ZVC0 841 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 USP17L1Q7RTZ2 530 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 CDAN1Q8IWY9 1227 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 KCTD17Q8N5Z5 321 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 SLC6A16Q9GZN6 736 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 IL21Q9HBE4 155 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 GPSM3Q9Y4H4 160 aa9.57□□□□□ -0.88
CTNNA1-202ENST00000517533 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
CTNNA1-202ENST00000517533 PCDHB9Q9Y5E1 797 aa9.56□□□□□ -0.88
CTNNA1-202ENST00000517533 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
CTNNA1-202ENST00000517533 NFATC2IPQ8NCF5 419 aa9.55□□□□□ -0.88
CTNNA1-202ENST00000517533 ARMC2Q8NEN0 867 aa9.55□□□□□ -0.88
CTNNA1-202ENST00000517533 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
CTNNA1-202ENST00000517533 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
CTNNA1-202ENST00000517533 CSB-PGBD3P0DP91 1061 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 POTEGQ6S5H5 508 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 BAP1Q92560 729 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 FOXJ1Q92949 421 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
CTNNA1-202ENST00000517533 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
CTNNA1-202ENST00000517533 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-202ENST00000517533 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
CTNNA1-202ENST00000517533 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-202ENST00000517533 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-202ENST00000517533 NCOA4Q13772 614 aa9.52□□□□□ -0.89
CTNNA1-202ENST00000517533 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
CTNNA1-202ENST00000517533 SLAIN2Q9P270 581 aa9.52□□□□□ -0.89
CTNNA1-202ENST00000517533 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
CTNNA1-202ENST00000517533 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
CTNNA1-202ENST00000517533 PLPP7Q8NBV4 271 aa9.51□□□□□ -0.89
CTNNA1-202ENST00000517533 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-202ENST00000517533 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
CTNNA1-202ENST00000517533 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
CTNNA1-202ENST00000517533 RNF135Q8IUD6 432 aa9.5□□□□□ -0.89
CTNNA1-202ENST00000517533 GZF1Q9H116 711 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-202ENST00000517533 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms