RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 RRAGCQ9HB90 399 aa0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 NOP53Q9NZM5 478 aaKnown RBP0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TSKSQ9UJT2 592 aa0.76□□□□□ -2.29
RNU6-1238P-201ENST00000517215 IGF1RP08069 1367 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 GNB5O14775 395 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 OIP5O43482 229 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 EVI5O60447 810 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 NR1I2O75469 434 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ITGA6P23229 1130 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 DSG2Q14126 1118 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ZNF800Q2TB10 664 aaPredicted RBP eCLIP0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 C6orf132Q5T0Z8 1188 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 LINC00114Q6XXX2 140 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 RNF19BQ6ZMZ0 732 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TTLL10Q6ZVT0 673 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 MBIPQ9NS73 344 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 DNMT3LQ9UJW3 386 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 WASF2Q9Y6W5 498 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 OBSCNQ5VST9 7968 aa0.75□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SOS2Q07890 1332 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 NBPF26B4DH59 902 aa0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 PHF14O94880 888 aa0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 OSBPP22059 807 aa0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SLC4A3P48751 1232 aa0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ZNF648Q5T619 568 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 RC3H1Q5TC82 1133 aaKnown RBP0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 GPHNQ9NQX3 736 aaPredicted RBP0.74□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SLC35F4A4IF30 521 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SHISA8B8ZZ34 492 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ACTN4O43707 911 aaKnown RBP0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 FCHSD2O94868 740 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TIMP2P16035 220 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TGM1P22735 817 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SSTR4P31391 388 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 WNT7BP56706 349 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 KRTAP10-6P60371 365 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 C6orf118Q5T5N4 469 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ASIC4Q96FT7 647 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SPSB2Q99619 263 aa0.73□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SIAH2O43255 324 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ADH1CP00326 375 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SPATA31C1P0DKV0 1188 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 HOXB4P17483 251 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 CD97P48960 835 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 KRTAP10-2P60368 255 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SWT1Q5T5J6 900 aaKnown RBP0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TATDN2Q93075 761 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 TRERF1Q96PN7 1200 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 ADGRE2Q9UHX3 823 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 PNMA3Q9UL41 463 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 HMCN1Q96RW7 5635 aa0.72□□□□□ -2.29
RNU6-1238P-201ENST00000517215 SERINC4A6NH21 518 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 KIAA1324LA8MWY0 1029 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 C3orf80F5H4A9 247 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 BMP2P12643 396 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ATXN1P54253 815 aaKnown RBP0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CTSWP56202 376 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 SKOR1P84550 965 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 PKN1Q16512 942 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 KMT5BQ4FZB7 885 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 GIGYF2Q6Y7W6 1299 aaKnown RBP0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 LCNL1Q6ZST4 164 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 LINC00528Q8N1L1 170 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 BORCS6Q96GS4 357 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MYRFLQ96LU7 910 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MENTQ9BUN1 341 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MFRPQ9BY79 579 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 LMCD1Q9NZU5 365 aa0.71□□□□□ -2.3
RNU6-1238P-201ENST00000517215 KRTAP29-1A8MX34 341 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 UPP2O95045 317 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 WDR4P57081 412 aaKnown RBP0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MAP3K9P80192 1104 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 NNTQ13423 1086 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 LCE1EQ5T753 118 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 C1orf229Q6ZS94 237 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 SCUBE3Q8IX30 993 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CDCA7LQ96GN5 454 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 EPAS1Q99814 870 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 KLF16Q9BXK1 252 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 OXCT2Q9BYC2 517 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 FAM198AQ9UFP1 575 aa0.7□□□□□ -2.3
RNU6-1238P-201ENST00000517215 FIGNL2A6NMB9 653 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 TTLL8A6PVC2 850 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 AKAP8O43823 692 aaKnown RBP0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ADAMTS4O75173 837 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MED26O95402 600 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CFPP27918 469 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 DGKGP49619 791 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 PRSS12P56730 875 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 SIAH1Q8IUQ4 282 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 EDARADDQ8WWZ3 215 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 RELTQ969Z4 430 aa0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 NSFL1CQ9UNZ2 370 aaKnown RBP0.69□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 APBA3O96018 575 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 AMHP03971 560 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 AMPD1P23109 780 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MAP2K3P46734 347 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 NFKB2Q00653 900 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ECM1Q16610 540 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms