RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 USP17L2Q6R6M4 530 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L1Q7RTZ2 530 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PLEKHM2Q8IWE5 1019 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 FAM177A1Q8N128 213 aaPredicted RBP4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SLC39A7Q92504 469 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 IGSF5Q9NSI5 407 aa4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 URB2Q14146 1524 aaKnown RBP4.05□□□□□ -1.76
SCARNA17.1-201ENST00000516211 RSF1Q96T23 1441 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L5A8MUK1 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L15C9J2P7 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L10C9JJH3 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L13C9JLJ4 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L12C9JPN9 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L11C9JVI0 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L21D6R901 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L18D6R9N7 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L22D6RA61 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L17D6RBQ6 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L19D6RCP7 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L20D6RJB6 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 NCLP19338 710 aaKnown RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SSFA2P28290 1259 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZC3H6P61129 1189 aaKnown RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 USP17L24Q0WX57 530 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 NR6A1Q15406 480 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 DOK7Q18PE1 504 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KANK4Q5T7N3 995 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 DNAJC14Q6Y2X3 702 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 CCDC125Q86Z20 511 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 STK32AQ8WU08 396 aa4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 CDCA7Q9BWT1 371 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 COL17A1Q9UMD9 1497 aaPredicted RBP4.04□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZC3H4Q9UPT8 1303 aaKnown RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZBBXA8MT70 800 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TRIM6-TRIM34B2RNG4 842 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 GPR37L1O60883 481 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 RASA1P20936 1047 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ATP2B4P23634 1241 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 VAMP1P23763 118 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 MCCD1P59942 119 aaPredicted RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SWI5Q1ZZU3 235 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 SLFNL1Q499Z3 407 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TRIM50Q86XT4 487 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 CLP1Q92989 425 aaKnown RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KIAA1522Q9P206 1035 aaPredicted RBP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 TSKSQ9UJT2 592 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 ZMIZ1Q9ULJ6 1067 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 PCDHGC3Q9UN70 934 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 AQRO60306 1485 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 GAPVD1Q14C86 1478 aa4.03□□□□□ -1.76
SCARNA17.1-201ENST00000516211 KDM6BO15054 1643 aa4.03□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ANKRD33BA6NCL7 494 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CFAP99D6REC4 459 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PPM1GO15355 546 aaPredicted RBP4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NUDT7P0C024 238 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 C7P10643 843 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ATP1A2P50993 1020 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 Q3C1V9 767 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ZSCAN29Q8IWY8 852 aaPredicted RBP4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 UBXN4Q92575 508 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 DCBLD2Q96PD2 775 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 BCL2L12Q9HB09 334 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ZSWIM6Q9HCJ5 1215 aa4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MKRN1Q9UHC7 482 aaKnown RBP4.02□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MYO15BQ96JP2 1530 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 COL9A1P20849 921 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FGD1P98174 961 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 GUCA2AQ02747 115 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 EML3Q32P44 896 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 DESI1Q6ICB0 168 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 RETREG3Q86VR2 466 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 RNF135Q8IUD6 432 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ANKMY2Q8IV38 441 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 GLYCTKQ8IVS8 523 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 EPS8L1Q8TE68 723 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FAM198AQ9UFP1 575 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 EGFL7Q9UHF1 273 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SRCAPQ6ZRS2 3230 aa4.01□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ABL1P00519 1130 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MAPK1P28482 360 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 ATP6V1AP38606 617 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SERPINB4P48594 390 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 MAP7D1Q3KQU3 841 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 KMT5BQ4FZB7 885 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 IFFO2Q5TF58 517 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PHLDB3Q6NSJ2 640 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 C1orf216Q8TAB5 229 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PPP1R1BQ9UD71 204 aaPredicted RBP4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FKBPLQ9UIM3 349 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 COLQQ9Y215 455 aaPredicted RBP4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CADPSQ9ULU8 1353 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CLASP1Q7Z460 1538 aa4□□□□□ -1.77
SCARNA17.1-201ENST00000516211 HAX1O00165 279 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PIK3CDO00329 1044 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 FBXO45P0C2W1 286 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 PTK7Q13308 1070 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NCOA4Q13772 614 aa3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 CRTC2Q53ET0 693 aaPredicted RBP3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 SWT1Q5T5J6 900 aaKnown RBP3.99□□□□□ -1.77
SCARNA17.1-201ENST00000516211 NPAS4Q8IUM7 802 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms