RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 CTHP32929 405 aa11.71□□□□□ -0.53
ATR-209ENST00000515810 MSS51Q4VC12 460 aa11.71□□□□□ -0.53
ATR-209ENST00000515810 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
ATR-209ENST00000515810 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
ATR-209ENST00000515810 MTRQ99707 1265 aa11.71□□□□□ -0.53
ATR-209ENST00000515810 FKBPLQ9UIM3 349 aa11.71□□□□□ -0.53
ATR-209ENST00000515810 ZPR1O75312 459 aa11.69□□□□□ -0.54
ATR-209ENST00000515810 MMP16P51512 607 aa11.69□□□□□ -0.54
ATR-209ENST00000515810 PPP1R12CQ9BZL4 782 aa11.69□□□□□ -0.54
ATR-209ENST00000515810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.68□□□□□ -0.54
ATR-209ENST00000515810 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
ATR-209ENST00000515810 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
ATR-209ENST00000515810 CCNYL3P0C7X3 344 aa11.67□□□□□ -0.54
ATR-209ENST00000515810 NR1H3Q13133 447 aa11.67□□□□□ -0.54
ATR-209ENST00000515810 RETREG2Q8NC44 543 aa11.67□□□□□ -0.54
ATR-209ENST00000515810 PALM3A6NDB9 673 aaPredicted RBP11.66□□□□□ -0.54
ATR-209ENST00000515810 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
ATR-209ENST00000515810 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
ATR-209ENST00000515810 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
ATR-209ENST00000515810 TFIP11Q9UBB9 837 aaKnown RBP11.66□□□□□ -0.54
ATR-209ENST00000515810 ZBBXA8MT70 800 aa11.65□□□□□ -0.54
ATR-209ENST00000515810 ADH1BP00325 375 aa11.65□□□□□ -0.54
ATR-209ENST00000515810 KCNH2Q12809 1159 aa11.65□□□□□ -0.54
ATR-209ENST00000515810 SEMA3FQ13275 785 aa11.65□□□□□ -0.54
ATR-209ENST00000515810 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
ATR-209ENST00000515810 IL21Q9HBE4 155 aa11.65□□□□□ -0.54
ATR-209ENST00000515810 TBC1D9Q6ZT07 1266 aa11.64□□□□□ -0.55
ATR-209ENST00000515810 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
ATR-209ENST00000515810 PIK3CDO00329 1044 aa11.63□□□□□ -0.55
ATR-209ENST00000515810 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
ATR-209ENST00000515810 LMOD1P29536 600 aaPredicted RBP11.62□□□□□ -0.55
ATR-209ENST00000515810 CDCA8Q53HL2 280 aa11.62□□□□□ -0.55
ATR-209ENST00000515810 PNMA1Q8ND90 353 aa11.62□□□□□ -0.55
ATR-209ENST00000515810 SOX11P35716 441 aa11.61□□□□□ -0.55
ATR-209ENST00000515810 EIF4G2P78344 907 aaKnown RBP eCLIP11.61□□□□□ -0.55
ATR-209ENST00000515810 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
ATR-209ENST00000515810 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
ATR-209ENST00000515810 PBXIP1Q96AQ6 731 aa11.6□□□□□ -0.55
ATR-209ENST00000515810 CARNS1A5YM72 827 aa11.59□□□□□ -0.55
ATR-209ENST00000515810 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
ATR-209ENST00000515810 SLC6A16Q9GZN6 736 aa11.58□□□□□ -0.56
ATR-209ENST00000515810 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
ATR-209ENST00000515810 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
ATR-209ENST00000515810 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
ATR-209ENST00000515810 S1PR4O95977 384 aa11.57□□□□□ -0.56
ATR-209ENST00000515810 KCNC4Q03721 635 aa11.57□□□□□ -0.56
ATR-209ENST00000515810 TRAIPQ9BWF2 469 aa11.57□□□□□ -0.56
ATR-209ENST00000515810 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
ATR-209ENST00000515810 FAM174AQ8TBP5 190 aa11.56□□□□□ -0.56
ATR-209ENST00000515810 ATP9BO43861 1147 aa11.54□□□□□ -0.56
ATR-209ENST00000515810 PTK2Q05397 1052 aa11.54□□□□□ -0.56
ATR-209ENST00000515810 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
ATR-209ENST00000515810 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
ATR-209ENST00000515810 ADAM32Q8TC27 787 aa11.53□□□□□ -0.56
ATR-209ENST00000515810 SH3BP5LQ7L8J4 393 aa11.52□□□□□ -0.57
ATR-209ENST00000515810 ARMC2Q8NEN0 867 aa11.52□□□□□ -0.57
ATR-209ENST00000515810 BAP1Q92560 729 aa11.52□□□□□ -0.57
ATR-209ENST00000515810 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
ATR-209ENST00000515810 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
ATR-209ENST00000515810 PCDHB9Q9Y5E1 797 aa11.52□□□□□ -0.57
ATR-209ENST00000515810 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
ATR-209ENST00000515810 NBPF14Q5TI25 921 aa11.51□□□□□ -0.57
ATR-209ENST00000515810 DEPDC4Q8N2C3 294 aa11.51□□□□□ -0.57
ATR-209ENST00000515810 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
ATR-209ENST00000515810 GPSM3Q9Y4H4 160 aa11.51□□□□□ -0.57
ATR-209ENST00000515810 SKIP12755 728 aa11.5□□□□□ -0.57
ATR-209ENST00000515810 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
ATR-209ENST00000515810 KANK4Q5T7N3 995 aaPredicted RBP11.5□□□□□ -0.57
ATR-209ENST00000515810 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
ATR-209ENST00000515810 FOXJ1Q92949 421 aa11.5□□□□□ -0.57
ATR-209ENST00000515810 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
ATR-209ENST00000515810 C4orf48Q5BLP8 95 aa11.49□□□□□ -0.57
ATR-209ENST00000515810 AEBP1Q8IUX7 1158 aa11.49□□□□□ -0.57
ATR-209ENST00000515810 PHTF2Q8N3S3 785 aa11.49□□□□□ -0.57
ATR-209ENST00000515810 CARD14Q9BXL6 1004 aa11.49□□□□□ -0.57
ATR-209ENST00000515810 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
ATR-209ENST00000515810 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
ATR-209ENST00000515810 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
ATR-209ENST00000515810 USP17L3A6NCW0 530 aa11.46□□□□□ -0.57
ATR-209ENST00000515810 USP17L4A6NCW7 530 aa11.46□□□□□ -0.57
ATR-209ENST00000515810 USP17L5A8MUK1 530 aa11.46□□□□□ -0.57
ATR-209ENST00000515810 USP17L2Q6R6M4 530 aa11.46□□□□□ -0.57
ATR-209ENST00000515810 USP17L1Q7RTZ2 530 aa11.46□□□□□ -0.57
ATR-209ENST00000515810 ZBTB33Q86T24 672 aa11.46□□□□□ -0.57
ATR-209ENST00000515810 ATG7O95352 703 aa11.45□□□□□ -0.58
ATR-209ENST00000515810 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
ATR-209ENST00000515810 ZNF511Q8NB15 262 aa11.44□□□□□ -0.58
ATR-209ENST00000515810 NFATC2IPQ8NCF5 419 aa11.44□□□□□ -0.58
ATR-209ENST00000515810 VRTNQ9H8Y1 702 aa11.44□□□□□ -0.58
ATR-209ENST00000515810 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
ATR-209ENST00000515810 SLFNL1Q499Z3 407 aa11.43□□□□□ -0.58
ATR-209ENST00000515810 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
ATR-209ENST00000515810 RNF135Q8IUD6 432 aa11.43□□□□□ -0.58
ATR-209ENST00000515810 ZBTB7CA1YPR0 619 aa11.42□□□□□ -0.58
ATR-209ENST00000515810 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
ATR-209ENST00000515810 SH3BP2P78314 561 aa11.42□□□□□ -0.58
ATR-209ENST00000515810 PPP1R18Q6NYC8 613 aa11.42□□□□□ -0.58
ATR-209ENST00000515810 ZMIZ1Q9ULJ6 1067 aa11.42□□□□□ -0.58
ATR-209ENST00000515810 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
ATR-209ENST00000515810 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms