RNA–Protein interactions for RNA: ENST00000515707.1

ABCC3-217, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3 BASIC

Gene ABCC3, Length 656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-217ENST00000515707 PHRF1Q9P1Y6 1649 aaKnown RBP28.73■■■□□ 2.19
ABCC3-217ENST00000515707 RXRBP28702 533 aa28.73■■■□□ 2.19
ABCC3-217ENST00000515707 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
ABCC3-217ENST00000515707 CABLES1Q8TDN4 633 aa28.73■■■□□ 2.19
ABCC3-217ENST00000515707 SLIT2O94813 1529 aa28.73■■■□□ 2.19
ABCC3-217ENST00000515707 BCL9LQ86UU0 1499 aa28.72■■■□□ 2.19
ABCC3-217ENST00000515707 ATRNO75882 1429 aa28.72■■■□□ 2.19
ABCC3-217ENST00000515707 PAK3O75914 559 aaPredicted RBP28.71■■■□□ 2.19
ABCC3-217ENST00000515707 QTRT2Q9H974 415 aaKnown RBP28.7■■■□□ 2.18
ABCC3-217ENST00000515707 AKAP12Q02952 1782 aa28.68■■■□□ 2.18
ABCC3-217ENST00000515707 PLEKHG5O94827 1062 aa28.68■■■□□ 2.18
ABCC3-217ENST00000515707 RBM6P78332 1123 aaKnown RBP28.68■■■□□ 2.18
ABCC3-217ENST00000515707 TRPC5Q9UL62 973 aaPredicted RBP28.68■■■□□ 2.18
ABCC3-217ENST00000515707 RGS12O14924 1447 aa28.68■■■□□ 2.18
ABCC3-217ENST00000515707 COL14A1Q05707 1796 aaKnown RBP28.67■■■□□ 2.18
ABCC3-217ENST00000515707 ATAD2Q6PL18 1390 aa28.65■■■□□ 2.18
ABCC3-217ENST00000515707 NRAPQ86VF7 1730 aa28.65■■■□□ 2.18
ABCC3-217ENST00000515707 BRD4O60885 1362 aaPredicted RBP28.64■■■□□ 2.18
ABCC3-217ENST00000515707 USP6P35125 1406 aa28.64■■■□□ 2.18
ABCC3-217ENST00000515707 NRKQ7Z2Y5 1582 aa28.62■■■□□ 2.17
ABCC3-217ENST00000515707 CABP1Q9NZU7 370 aa28.62■■■□□ 2.17
ABCC3-217ENST00000515707 TIMELESSQ9UNS1 1208 aa28.62■■■□□ 2.17
ABCC3-217ENST00000515707 UNC5CLQ8IV45 518 aa28.6■■■□□ 2.17
ABCC3-217ENST00000515707 PIK3C2AO00443 1686 aa28.6■■■□□ 2.17
ABCC3-217ENST00000515707 MON2Q7Z3U7 1717 aa28.6■■■□□ 2.17
ABCC3-217ENST00000515707 GLI3P10071 1580 aa28.59■■■□□ 2.17
ABCC3-217ENST00000515707 SSH2Q76I76 1423 aa28.57■■■□□ 2.16
ABCC3-217ENST00000515707 USP19O94966 1318 aa28.55■■■□□ 2.16
ABCC3-217ENST00000515707 FAM83GA6ND36 823 aa28.55■■■□□ 2.16
ABCC3-217ENST00000515707 NUTM2GQ5VZR2 741 aa28.55■■■□□ 2.16
ABCC3-217ENST00000515707 ABTB2Q8N961 1025 aa28.55■■■□□ 2.16
ABCC3-217ENST00000515707 CCER1Q8TC90 406 aaPredicted RBP28.55■■■□□ 2.16
ABCC3-217ENST00000515707 CPSF1Q10570 1443 aaKnown RBP28.54■■■□□ 2.16
ABCC3-217ENST00000515707 USP47Q96K76 1375 aa28.54■■■□□ 2.16
ABCC3-217ENST00000515707 GJD4Q96KN9 370 aaPredicted RBP28.53■■■□□ 2.16
ABCC3-217ENST00000515707 TESK2Q96S53 571 aa28.52■■■□□ 2.16
ABCC3-217ENST00000515707 KIAA0232Q92628 1395 aa28.51■■■□□ 2.16
ABCC3-217ENST00000515707 ST20-MTHFSA0A0A6YYL1 179 aa28.51■■■□□ 2.15
ABCC3-217ENST00000515707 SLIT3O75094 1523 aa28.51■■■□□ 2.15
ABCC3-217ENST00000515707 PRDM11Q9NQV5 511 aa28.5■■■□□ 2.15
ABCC3-217ENST00000515707 CD163L1Q9NR16 1453 aa28.49■■■□□ 2.15
ABCC3-217ENST00000515707 VPS72Q15906 364 aa28.49■■■□□ 2.15
ABCC3-217ENST00000515707 LMO7Q8WWI1 1683 aa28.48■■■□□ 2.15
ABCC3-217ENST00000515707 NLRP13Q86W25 1043 aa28.48■■■□□ 2.15
ABCC3-217ENST00000515707 ZNF692Q9BU19 519 aaPredicted RBP28.48■■■□□ 2.15
ABCC3-217ENST00000515707 KTN1Q86UP2 1357 aaKnown RBP28.48■■■□□ 2.15
ABCC3-217ENST00000515707 PUS7Q96PZ0 661 aaKnown RBP28.47■■■□□ 2.15
ABCC3-217ENST00000515707 BTG4Q9NY30 223 aa28.47■■■□□ 2.15
ABCC3-217ENST00000515707 USP54Q70EL1 1684 aa28.46■■■□□ 2.15
ABCC3-217ENST00000515707 CPDO75976 1380 aa28.46■■■□□ 2.15
ABCC3-217ENST00000515707 SLC24A1O60721 1099 aa28.45■■■□□ 2.14
ABCC3-217ENST00000515707 TTC21AQ8NDW8 1320 aa28.44■■■□□ 2.14
ABCC3-217ENST00000515707 BRWD3Q6RI45 1802 aa28.44■■■□□ 2.14
ABCC3-217ENST00000515707 ZC3H6P61129 1189 aaKnown RBP28.44■■■□□ 2.14
ABCC3-217ENST00000515707 NINLQ9Y2I6 1382 aa28.44■■■□□ 2.14
ABCC3-217ENST00000515707 TTC21BQ7Z4L5 1316 aa28.43■■■□□ 2.14
ABCC3-217ENST00000515707 CCDC9Q9Y3X0 531 aaKnown RBP28.42■■■□□ 2.14
ABCC3-217ENST00000515707 EP400Q96L91 3159 aa28.42■■■□□ 2.14
ABCC3-217ENST00000515707 NLRP6P59044 892 aa28.41■■■□□ 2.14
ABCC3-217ENST00000515707 CHRNA2Q15822 529 aa28.41■■■□□ 2.14
ABCC3-217ENST00000515707 GCP02774 474 aa28.4■■■□□ 2.14
ABCC3-217ENST00000515707 TMC1Q8TDI8 760 aa28.4■■■□□ 2.14
ABCC3-217ENST00000515707 EDC4Q6P2E9 1401 aaKnown RBP28.39■■■□□ 2.14
ABCC3-217ENST00000515707 UPF1Q92900 1129 aaKnown RBP eCLIP28.39■■■□□ 2.14
ABCC3-217ENST00000515707 CAMTA1Q9Y6Y1 1673 aa28.38■■■□□ 2.13
ABCC3-217ENST00000515707 A0A1W2PP64 1363 aa28.38■■■□□ 2.13
ABCC3-217ENST00000515707 HDGFL2Q7Z4V5 671 aaPredicted RBP28.37■■■□□ 2.13
ABCC3-217ENST00000515707 SLC12A5Q9H2X9 1139 aa28.37■■■□□ 2.13
ABCC3-217ENST00000515707 THSD7AQ9UPZ6 1657 aa28.36■■■□□ 2.13
ABCC3-217ENST00000515707 TERF2IPQ9NYB0 399 aa28.36■■■□□ 2.13
ABCC3-217ENST00000515707 NFAT5O94916 1531 aa28.36■■■□□ 2.13
ABCC3-217ENST00000515707 TMF1P82094 1093 aa28.35■■■□□ 2.13
ABCC3-217ENST00000515707 SPATA31A5Q5VU36 1347 aa28.35■■■□□ 2.13
ABCC3-217ENST00000515707 SPATA31A7Q8IWB4 1347 aa28.35■■■□□ 2.13
ABCC3-217ENST00000515707 COL18A1P39060 1754 aa28.34■■■□□ 2.13
ABCC3-217ENST00000515707 MYOM1P52179 1685 aa28.34■■■□□ 2.13
ABCC3-217ENST00000515707 COL5A2P05997 1499 aaPredicted RBP28.33■■■□□ 2.13
ABCC3-217ENST00000515707 ONECUT3O60422 494 aaPredicted RBP28.32■■■□□ 2.12
ABCC3-217ENST00000515707 SEPT12Q8IYM1 358 aa28.31■■■□□ 2.12
ABCC3-217ENST00000515707 USP31Q70CQ4 1352 aa28.31■■■□□ 2.12
ABCC3-217ENST00000515707 ABCC6O95255 1503 aa28.3■■■□□ 2.12
ABCC3-217ENST00000515707 AATKQ6ZMQ8 1374 aa28.3■■■□□ 2.12
ABCC3-217ENST00000515707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.3■■■□□ 2.12
ABCC3-217ENST00000515707 STRN4Q9NRL3 753 aa28.3■■■□□ 2.12
ABCC3-217ENST00000515707 ANKRD36BQ8N2N9 1353 aa28.29■■■□□ 2.12
ABCC3-217ENST00000515707 FAM98CQ17RN3 349 aaKnown RBP28.29■■■□□ 2.12
ABCC3-217ENST00000515707 KCNH5Q8NCM2 988 aa28.29■■■□□ 2.12
ABCC3-217ENST00000515707 SPATA31A1Q5TZJ5 1347 aa28.28■■■□□ 2.12
ABCC3-217ENST00000515707 LTN1O94822 1766 aa28.27■■■□□ 2.12
ABCC3-217ENST00000515707 RGPD5Q99666 1765 aa28.27■■■□□ 2.12
ABCC3-217ENST00000515707 CDCA8Q53HL2 280 aa28.27■■■□□ 2.12
ABCC3-217ENST00000515707 NME9Q86XW9 330 aa28.27■■■□□ 2.12
ABCC3-217ENST00000515707 OVOS2A0A0J9YW53 1432 aa28.26■■■□□ 2.12
ABCC3-217ENST00000515707 OVOS2Q6IE36 1432 aa28.26■■■□□ 2.12
ABCC3-217ENST00000515707 A0A0G2JS52 829 aa28.25■■■□□ 2.11
ABCC3-217ENST00000515707 ZBTB7CA1YPR0 619 aa28.25■■■□□ 2.11
ABCC3-217ENST00000515707 MYT1Q01538 1121 aa28.25■■■□□ 2.11
ABCC3-217ENST00000515707 EVA1CP58658 441 aa28.24■■■□□ 2.11
ABCC3-217ENST00000515707 SOX12O15370 315 aa28.23■■■□□ 2.11
ABCC3-217ENST00000515707 ZRANB1Q9UGI0 708 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms