RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 RAB3GAP1Q15042 981 aa8.87□□□□□ -0.99
LDB2-216ENST00000515064 TSPYL1Q9H0U9 437 aa8.87□□□□□ -0.99
LDB2-216ENST00000515064 RNF216Q9NWF9 866 aaPredicted RBP8.87□□□□□ -0.99
LDB2-216ENST00000515064 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
LDB2-216ENST00000515064 NINLQ9Y2I6 1382 aa8.87□□□□□ -0.99
LDB2-216ENST00000515064 GABPB1Q06547 395 aaPredicted RBP8.87□□□□□ -0.99
LDB2-216ENST00000515064 TSC1Q92574 1164 aa8.87□□□□□ -0.99
LDB2-216ENST00000515064 RPRD2Q5VT52 1461 aaKnown RBP8.87□□□□□ -0.99
LDB2-216ENST00000515064 REREQ9P2R6 1566 aa8.87□□□□□ -0.99
LDB2-216ENST00000515064 AGLP35573 1532 aa8.86□□□□□ -0.99
LDB2-216ENST00000515064 MFAP1P55081 439 aaKnown RBP8.86□□□□□ -0.99
LDB2-216ENST00000515064 ZNF445P59923 1031 aa8.86□□□□□ -0.99
LDB2-216ENST00000515064 CLTCQ00610 1675 aaKnown RBP8.86□□□□□ -0.99
LDB2-216ENST00000515064 FEZ1Q99689 392 aa8.86□□□□□ -0.99
LDB2-216ENST00000515064 DMRT2Q9Y5R5 561 aa8.86□□□□□ -0.99
LDB2-216ENST00000515064 CAMSAP1Q5T5Y3 1602 aa8.86□□□□□ -0.99
LDB2-216ENST00000515064 ATP7AQ04656 1500 aa8.86□□□□□ -0.99
LDB2-216ENST00000515064 NCOA3Q9Y6Q9 1424 aa8.86□□□□□ -0.99
LDB2-216ENST00000515064 ZBTB7CA1YPR0 619 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 DDIT3P35638 169 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 JARID2Q92833 1246 aaPredicted RBP8.85□□□□□ -0.99
LDB2-216ENST00000515064 RRP7BPQ9NSQ0 103 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 CGNL1Q0VF96 1302 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 TRIM6-TRIM34B2RNG4 842 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 U2AF2P26368 475 aaKnown RBP eCLIP8.85□□□□□ -0.99
LDB2-216ENST00000515064 DUSP27Q5VZP5 1158 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 FBXO31Q5XUX0 539 aaPredicted RBP8.85□□□□□ -0.99
LDB2-216ENST00000515064 SMC5Q8IY18 1101 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 TRIM34Q9BYJ4 488 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 BCCIPQ9P287 314 aaKnown RBP eCLIP8.85□□□□□ -0.99
LDB2-216ENST00000515064 LTBP4Q8N2S1 1624 aa8.85□□□□□ -0.99
LDB2-216ENST00000515064 APPP05067 770 aa8.84□□□□□ -0.99
LDB2-216ENST00000515064 CLUAP1Q96AJ1 413 aa8.84□□□□□ -0.99
LDB2-216ENST00000515064 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
LDB2-216ENST00000515064 OGFRQ9NZT2 677 aa8.84□□□□□ -0.99
LDB2-216ENST00000515064 CALCOCO1Q9P1Z2 691 aa8.84□□□□□ -0.99
LDB2-216ENST00000515064 ZSCAN23Q3MJ62 389 aa8.84□□□□□ -0.99
LDB2-216ENST00000515064 RBSNQ9H1K0 784 aa8.84□□□□□ -0.99
LDB2-216ENST00000515064 PARD3Q8TEW0 1356 aa8.83□□□□□ -1
LDB2-216ENST00000515064 CLGNO14967 610 aa8.83□□□□□ -1
LDB2-216ENST00000515064 CAVIN1Q6NZI2 390 aaKnown RBP8.83□□□□□ -1
LDB2-216ENST00000515064 HDAC5Q9UQL6 1122 aa8.83□□□□□ -1
LDB2-216ENST00000515064 A2MP01023 1474 aa8.83□□□□□ -1
LDB2-216ENST00000515064 INO80Q9ULG1 1556 aaPredicted RBP8.83□□□□□ -1
LDB2-216ENST00000515064 GOLGA2Q08379 1002 aa8.83□□□□□ -1
LDB2-216ENST00000515064 CHAF1AQ13111 956 aaPredicted RBP8.83□□□□□ -1
LDB2-216ENST00000515064 PMFBP1Q8TBY8 1022 aa8.83□□□□□ -1
LDB2-216ENST00000515064 PLXNC1O60486 1568 aa8.82□□□□□ -1
LDB2-216ENST00000515064 FAM177BA6PVY3 158 aa8.82□□□□□ -1
LDB2-216ENST00000515064 RTEL1-TNFRSF6BF6WH68 1400 aa8.82□□□□□ -1
LDB2-216ENST00000515064 ANKRD30BQ9BXX2 1392 aa8.82□□□□□ -1
LDB2-216ENST00000515064 KIF3BO15066 747 aa8.82□□□□□ -1
LDB2-216ENST00000515064 SNX21Q969T3 373 aa8.82□□□□□ -1
LDB2-216ENST00000515064 YY1AP1Q9H869 796 aa8.82□□□□□ -1
LDB2-216ENST00000515064 PTPRTO14522 1441 aa8.82□□□□□ -1
LDB2-216ENST00000515064 MBD5Q9P267 1494 aa8.81□□□□□ -1
LDB2-216ENST00000515064 MMP14P50281 582 aa8.81□□□□□ -1
LDB2-216ENST00000515064 AXDND1Q5T1B0 1012 aaPredicted RBP8.81□□□□□ -1
LDB2-216ENST00000515064 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
LDB2-216ENST00000515064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.81□□□□□ -1
LDB2-216ENST00000515064 MYO3AQ8NEV4 1616 aa8.81□□□□□ -1
LDB2-216ENST00000515064 KIAA1107Q9UPP5 1409 aa8.81□□□□□ -1
LDB2-216ENST00000515064 UBAP1LF5GYI3 381 aa8.8□□□□□ -1
LDB2-216ENST00000515064 TNNT3P45378 269 aaPredicted RBP8.8□□□□□ -1
LDB2-216ENST00000515064 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
LDB2-216ENST00000515064 POTEDQ86YR6 584 aa8.8□□□□□ -1
LDB2-216ENST00000515064 DIAPH3Q9NSV4 1193 aa8.8□□□□□ -1
LDB2-216ENST00000515064 GEMIN8Q9NWZ8 242 aaKnown RBP8.8□□□□□ -1
LDB2-216ENST00000515064 TULP2O00295 520 aa8.8□□□□□ -1
LDB2-216ENST00000515064 PIBF1Q8WXW3 757 aa8.8□□□□□ -1
LDB2-216ENST00000515064 CEP170BQ9Y4F5 1589 aaPredicted RBP8.8□□□□□ -1
LDB2-216ENST00000515064 NPATQ14207 1427 aa8.8□□□□□ -1
LDB2-216ENST00000515064 CFAP65Q6ZU64 1925 aaKnown RBP8.79□□□□□ -1
LDB2-216ENST00000515064 BAG4O95429 457 aaKnown RBP8.79□□□□□ -1
LDB2-216ENST00000515064 SSFA2P28290 1259 aa8.79□□□□□ -1
LDB2-216ENST00000515064 PDE3AQ14432 1141 aa8.79□□□□□ -1
LDB2-216ENST00000515064 NOLC1Q14978 699 aaKnown RBP eCLIP8.79□□□□□ -1
LDB2-216ENST00000515064 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
LDB2-216ENST00000515064 CNPY4Q8N129 248 aa8.79□□□□□ -1
LDB2-216ENST00000515064 ANKRD7Q92527 254 aa8.79□□□□□ -1
LDB2-216ENST00000515064 FOXD4L1Q9NU39 408 aa8.79□□□□□ -1
LDB2-216ENST00000515064 PDZRN3Q9UPQ7 1066 aa8.79□□□□□ -1
LDB2-216ENST00000515064 MROH2AA6NES4 1674 aa8.79□□□□□ -1
LDB2-216ENST00000515064 SLFN14P0C7P3 912 aa8.79□□□□□ -1
LDB2-216ENST00000515064 CAPN2P17655 700 aa8.79□□□□□ -1
LDB2-216ENST00000515064 PIP4K2BP78356 416 aa8.79□□□□□ -1
LDB2-216ENST00000515064 EFCC1Q9HA90 598 aa8.79□□□□□ -1
LDB2-216ENST00000515064 BCAR3O75815 825 aa8.78□□□□□ -1
LDB2-216ENST00000515064 MCTP1Q6DN14 999 aa8.78□□□□□ -1
LDB2-216ENST00000515064 NGEFQ8N5V2 710 aa8.78□□□□□ -1
LDB2-216ENST00000515064 ZBTB9Q96C00 473 aa8.78□□□□□ -1
LDB2-216ENST00000515064 COG6Q9Y2V7 657 aa8.78□□□□□ -1
LDB2-216ENST00000515064 PLEKHH1Q9ULM0 1364 aa8.78□□□□□ -1
LDB2-216ENST00000515064 HAP1P54257 671 aaPredicted RBP8.78□□□□□ -1
LDB2-216ENST00000515064 WDR43Q15061 677 aaKnown RBP eCLIP8.78□□□□□ -1
LDB2-216ENST00000515064 CLEC17AQ6ZS10 378 aa8.78□□□□□ -1
LDB2-216ENST00000515064 WWC1Q8IX03 1113 aa8.78□□□□□ -1
LDB2-216ENST00000515064 ZNF622Q969S3 477 aaKnown RBP eCLIP8.78□□□□□ -1
LDB2-216ENST00000515064 GCC2Q8IWJ2 1684 aa8.78□□□□□ -1
LDB2-216ENST00000515064 ADGBQ8N7X0 1667 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms