RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 RGPD1P0DJD0 1748 aa33.63■■■□□ 2.97
SMAD1-214ENST00000514831 WASLO00401 505 aaPredicted RBP33.63■■■□□ 2.97
SMAD1-214ENST00000514831 THSD7AQ9UPZ6 1657 aa33.62■■■□□ 2.97
SMAD1-214ENST00000514831 A0A0G2JS52 829 aa33.62■■■□□ 2.97
SMAD1-214ENST00000514831 MYT1Q01538 1121 aa33.62■■■□□ 2.97
SMAD1-214ENST00000514831 FAM98CQ17RN3 349 aaKnown RBP33.61■■■□□ 2.97
SMAD1-214ENST00000514831 DCAF11Q8TEB1 546 aa33.6■■■□□ 2.97
SMAD1-214ENST00000514831 STAC3Q96MF2 364 aa33.6■■■□□ 2.97
SMAD1-214ENST00000514831 ATP7BP35670 1465 aa33.6■■■□□ 2.97
SMAD1-214ENST00000514831 KDM2AQ9Y2K7 1162 aa33.58■■■□□ 2.97
SMAD1-214ENST00000514831 PHRF1Q9P1Y6 1649 aaKnown RBP33.57■■■□□ 2.97
SMAD1-214ENST00000514831 BAG6P46379 1132 aa33.57■■■□□ 2.96
SMAD1-214ENST00000514831 NGDNQ8NEJ9 315 aaKnown RBP33.56■■■□□ 2.96
SMAD1-214ENST00000514831 SPATA31A5Q5VU36 1347 aa33.55■■■□□ 2.96
SMAD1-214ENST00000514831 SPATA31A7Q8IWB4 1347 aa33.55■■■□□ 2.96
SMAD1-214ENST00000514831 TOPAZ1Q8N9V7 1692 aa33.54■■■□□ 2.96
SMAD1-214ENST00000514831 TNS1Q9HBL0 1735 aaKnown RBP33.53■■■□□ 2.96
SMAD1-214ENST00000514831 PAK3O75914 559 aaPredicted RBP33.51■■■□□ 2.95
SMAD1-214ENST00000514831 PRDM11Q9NQV5 511 aa33.51■■■□□ 2.95
SMAD1-214ENST00000514831 DISP2A7MBM2 1401 aa33.49■■■□□ 2.95
SMAD1-214ENST00000514831 KIAA1210Q9ULL0 1709 aa33.47■■■□□ 2.95
SMAD1-214ENST00000514831 NUDT16Q96DE0 195 aaKnown RBP33.46■■■□□ 2.95
SMAD1-214ENST00000514831 KIAA0232Q92628 1395 aa33.46■■■□□ 2.95
SMAD1-214ENST00000514831 POLR3AO14802 1390 aaPredicted RBP33.44■■■□□ 2.94
SMAD1-214ENST00000514831 PSDA5PKW4 1024 aaPredicted RBP33.43■■■□□ 2.94
SMAD1-214ENST00000514831 FAM182BQ5T319 152 aa33.42■■■□□ 2.94
SMAD1-214ENST00000514831 SPATA31A1Q5TZJ5 1347 aa33.42■■■□□ 2.94
SMAD1-214ENST00000514831 NRKQ7Z2Y5 1582 aa33.42■■■□□ 2.94
SMAD1-214ENST00000514831 HRCP23327 699 aa33.41■■■□□ 2.94
SMAD1-214ENST00000514831 EN1Q05925 392 aaPredicted RBP33.4■■■□□ 2.94
SMAD1-214ENST00000514831 CHRNA2Q15822 529 aa33.37■■■□□ 2.93
SMAD1-214ENST00000514831 CDK19Q9BWU1 502 aa33.37■■■□□ 2.93
SMAD1-214ENST00000514831 LMO7Q8WWI1 1683 aa33.36■■■□□ 2.93
SMAD1-214ENST00000514831 ACEP12821 1306 aa33.34■■■□□ 2.93
SMAD1-214ENST00000514831 SSH2Q76I76 1423 aa33.34■■■□□ 2.93
SMAD1-214ENST00000514831 STRN4Q9NRL3 753 aa33.33■■■□□ 2.93
SMAD1-214ENST00000514831 CCDC61Q9Y6R9 512 aa33.33■■■□□ 2.93
SMAD1-214ENST00000514831 ZC3H6P61129 1189 aaKnown RBP33.32■■■□□ 2.92
SMAD1-214ENST00000514831 NBPF8Q3BBV2 869 aa33.31■■■□□ 2.92
SMAD1-214ENST00000514831 NUTM2GQ5VZR2 741 aa33.31■■■□□ 2.92
SMAD1-214ENST00000514831 CAMTA1Q9Y6Y1 1673 aa33.3■■■□□ 2.92
SMAD1-214ENST00000514831 PLEKHG3A1L390 1219 aa33.3■■■□□ 2.92
SMAD1-214ENST00000514831 FAM196AQ6ZSG2 479 aa33.3■■■□□ 2.92
SMAD1-214ENST00000514831 CPDO75976 1380 aa33.29■■■□□ 2.92
SMAD1-214ENST00000514831 RREB1Q92766 1687 aa33.29■■■□□ 2.92
SMAD1-214ENST00000514831 BARGINQ6ZT62 677 aa33.28■■■□□ 2.92
SMAD1-214ENST00000514831 USP19O94966 1318 aa33.28■■■□□ 2.92
SMAD1-214ENST00000514831 PARD3Q8TEW0 1356 aa33.27■■■□□ 2.92
SMAD1-214ENST00000514831 R3HDM1Q15032 1099 aaKnown RBP33.27■■■□□ 2.92
SMAD1-214ENST00000514831 EZH2Q15910 746 aaKnown RBP33.27■■■□□ 2.92
SMAD1-214ENST00000514831 TRIM37O94972 964 aa33.25■■■□□ 2.91
SMAD1-214ENST00000514831 CAMKK2Q96RR4 588 aa33.25■■■□□ 2.91
SMAD1-214ENST00000514831 ABTB2Q8N961 1025 aa33.24■■■□□ 2.91
SMAD1-214ENST00000514831 NUP188Q5SRE5 1749 aa33.23■■■□□ 2.91
SMAD1-214ENST00000514831 USP35Q9P2H5 1018 aa33.23■■■□□ 2.91
SMAD1-214ENST00000514831 PARP4Q9UKK3 1724 aaKnown RBP33.22■■■□□ 2.91
SMAD1-214ENST00000514831 PPIP5K1Q6PFW1 1433 aa33.22■■■□□ 2.91
SMAD1-214ENST00000514831 EVA1CP58658 441 aa33.22■■■□□ 2.91
SMAD1-214ENST00000514831 QRICH2Q9H0J4 1663 aa33.22■■■□□ 2.91
SMAD1-214ENST00000514831 NBPF1Q3BBV0 1214 aa33.19■■■□□ 2.9
SMAD1-214ENST00000514831 LARP1Q6PKG0 1096 aaKnown RBP33.19■■■□□ 2.9
SMAD1-214ENST00000514831 COL5A2P05997 1499 aaPredicted RBP33.18■■■□□ 2.9
SMAD1-214ENST00000514831 PDE3BQ13370 1112 aa33.18■■■□□ 2.9
SMAD1-214ENST00000514831 TCP11L2Q8N4U5 519 aa33.18■■■□□ 2.9
SMAD1-214ENST00000514831 BRD4O60885 1362 aaPredicted RBP33.18■■■□□ 2.9
SMAD1-214ENST00000514831 APBA3O96018 575 aa33.17■■■□□ 2.9
SMAD1-214ENST00000514831 NLRP13Q86W25 1043 aa33.16■■■□□ 2.9
SMAD1-214ENST00000514831 CENPJQ9HC77 1338 aaPredicted RBP33.16■■■□□ 2.9
SMAD1-214ENST00000514831 SRPK2P78362 688 aaKnown RBP33.15■■■□□ 2.9
SMAD1-214ENST00000514831 THRAP3Q9Y2W1 955 aaKnown RBP33.15■■■□□ 2.9
SMAD1-214ENST00000514831 GCP02774 474 aa33.14■■■□□ 2.9
SMAD1-214ENST00000514831 SLIT3O75094 1523 aa33.13■■■□□ 2.89
SMAD1-214ENST00000514831 USP6P35125 1406 aa33.11■■■□□ 2.89
SMAD1-214ENST00000514831 CRB1P82279 1406 aa33.11■■■□□ 2.89
SMAD1-214ENST00000514831 PEAK1Q9H792 1746 aa33.1■■■□□ 2.89
SMAD1-214ENST00000514831 CABP2Q9NPB3 220 aa33.09■■■□□ 2.89
SMAD1-214ENST00000514831 LRRC37A3O60309 1634 aa33.09■■■□□ 2.89
SMAD1-214ENST00000514831 RGPD3A6NKT7 1758 aaPredicted RBP33.09■■■□□ 2.89
SMAD1-214ENST00000514831 RGPD4Q7Z3J3 1758 aa33.09■■■□□ 2.89
SMAD1-214ENST00000514831 PIK3C2AO00443 1686 aa33.08■■■□□ 2.89
SMAD1-214ENST00000514831 WNK3Q9BYP7 1800 aa33.07■■■□□ 2.89
SMAD1-214ENST00000514831 COL18A1P39060 1754 aa33.05■■■□□ 2.88
SMAD1-214ENST00000514831 AATKQ6ZMQ8 1374 aa33.05■■■□□ 2.88
SMAD1-214ENST00000514831 SBF2Q86WG5 1849 aa33.05■■■□□ 2.88
SMAD1-214ENST00000514831 OVOS2A0A0G2JMS6 1433 aa33.04■■■□□ 2.88
SMAD1-214ENST00000514831 OVOS2A0A0J9YW53 1432 aa33.04■■■□□ 2.88
SMAD1-214ENST00000514831 OVOS2Q6IE36 1432 aa33.04■■■□□ 2.88
SMAD1-214ENST00000514831 C11orf95C9JLR9 678 aaPredicted RBP33.04■■■□□ 2.88
SMAD1-214ENST00000514831 TRPM1Q7Z4N2 1603 aa33.02■■■□□ 2.88
SMAD1-214ENST00000514831 NBPF14Q5TI25 921 aa33.01■■■□□ 2.87
SMAD1-214ENST00000514831 CABP1Q9NZU7 370 aa33.01■■■□□ 2.87
SMAD1-214ENST00000514831 NLRP6P59044 892 aa33■■■□□ 2.87
SMAD1-214ENST00000514831 AKAP12Q02952 1782 aa32.98■■■□□ 2.87
SMAD1-214ENST00000514831 CPSF1Q10570 1443 aaKnown RBP32.95■■■□□ 2.87
SMAD1-214ENST00000514831 ZBTB7CA1YPR0 619 aa32.95■■■□□ 2.87
SMAD1-214ENST00000514831 EVC2Q86UK5 1308 aa32.94■■■□□ 2.86
SMAD1-214ENST00000514831 RGPD5Q99666 1765 aa32.92■■■□□ 2.86
SMAD1-214ENST00000514831 DDB1Q16531 1140 aa32.91■■■□□ 2.86
SMAD1-214ENST00000514831 TOM1L2Q6ZVM7 507 aa32.91■■■□□ 2.86
SMAD1-214ENST00000514831 WDR17Q8IZU2 1322 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms