RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-207ENST00000514610 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
HMGCS1-207ENST00000514610 PPEF1O14829 653 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-207ENST00000514610 CCDC24Q8N4L8 307 aa10.21□□□□□ -0.77
HMGCS1-207ENST00000514610 FKBPLQ9UIM3 349 aa10.21□□□□□ -0.77
HMGCS1-207ENST00000514610 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-207ENST00000514610 VAC14Q08AM6 782 aa10.2□□□□□ -0.78
HMGCS1-207ENST00000514610 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
HMGCS1-207ENST00000514610 UNC93B1Q9H1C4 597 aa10.18□□□□□ -0.78
HMGCS1-207ENST00000514610 A0A0G2JS52 829 aa10.17□□□□□ -0.78
HMGCS1-207ENST00000514610 RNF223E7ERA6 249 aa10.17□□□□□ -0.78
HMGCS1-207ENST00000514610 WASHC4Q2M389 1173 aa10.17□□□□□ -0.78
HMGCS1-207ENST00000514610 ADAMTS19Q8TE59 1207 aa10.17□□□□□ -0.78
HMGCS1-207ENST00000514610 PLA2G2CQ5R387 149 aa10.16□□□□□ -0.78
HMGCS1-207ENST00000514610 PNMA1Q8ND90 353 aa10.16□□□□□ -0.78
HMGCS1-207ENST00000514610 ZC3H4Q9UPT8 1303 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-207ENST00000514610 FBXO45P0C2W1 286 aa10.15□□□□□ -0.78
HMGCS1-207ENST00000514610 OCSTAMPQ9BR26 566 aa10.15□□□□□ -0.78
HMGCS1-207ENST00000514610 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
HMGCS1-207ENST00000514610 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
HMGCS1-207ENST00000514610 GLMNQ92990 594 aa10.14□□□□□ -0.79
HMGCS1-207ENST00000514610 ZBBXA8MT70 800 aa10.13□□□□□ -0.79
HMGCS1-207ENST00000514610 NR1H3Q13133 447 aa10.13□□□□□ -0.79
HMGCS1-207ENST00000514610 ARMC2Q8NEN0 867 aa10.13□□□□□ -0.79
HMGCS1-207ENST00000514610 ARID3AQ99856 593 aa10.13□□□□□ -0.79
HMGCS1-207ENST00000514610 RGS20O76081 388 aa10.12□□□□□ -0.79
HMGCS1-207ENST00000514610 PDXDC2PQ6P474 469 aa10.12□□□□□ -0.79
HMGCS1-207ENST00000514610 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
HMGCS1-207ENST00000514610 BAP1Q92560 729 aa10.12□□□□□ -0.79
HMGCS1-207ENST00000514610 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
HMGCS1-207ENST00000514610 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
HMGCS1-207ENST00000514610 LINC01559Q495D7 138 aa10.11□□□□□ -0.79
HMGCS1-207ENST00000514610 HDGFL1Q5TGJ6 251 aa10.11□□□□□ -0.79
HMGCS1-207ENST00000514610 NBPF14Q5TI25 921 aa10.11□□□□□ -0.79
HMGCS1-207ENST00000514610 ALG2Q9H553 416 aa10.11□□□□□ -0.79
HMGCS1-207ENST00000514610 GGCXP38435 758 aa10.1□□□□□ -0.79
HMGCS1-207ENST00000514610 SH3BP5LQ7L8J4 393 aa10.1□□□□□ -0.79
HMGCS1-207ENST00000514610 CALR3Q96L12 384 aaKnown RBP10.09□□□□□ -0.79
HMGCS1-207ENST00000514610 GPSM3Q9Y4H4 160 aa10.09□□□□□ -0.79
HMGCS1-207ENST00000514610 PTK2Q05397 1052 aa10.08□□□□□ -0.8
HMGCS1-207ENST00000514610 ZNF511Q8NB15 262 aa10.08□□□□□ -0.8
HMGCS1-207ENST00000514610 FOXJ1Q92949 421 aa10.08□□□□□ -0.8
HMGCS1-207ENST00000514610 EMID1Q96A84 441 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-207ENST00000514610 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
HMGCS1-207ENST00000514610 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
HMGCS1-207ENST00000514610 ARHGAP9Q9BRR9 750 aa10.07□□□□□ -0.8
HMGCS1-207ENST00000514610 SH3BP2P78314 561 aa10.06□□□□□ -0.8
HMGCS1-207ENST00000514610 TRIM32Q13049 653 aa10.06□□□□□ -0.8
HMGCS1-207ENST00000514610 ADAM32Q8TC27 787 aa10.06□□□□□ -0.8
HMGCS1-207ENST00000514610 SOX11P35716 441 aa10.05□□□□□ -0.8
HMGCS1-207ENST00000514610 EIF4G2P78344 907 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMGCS1-207ENST00000514610 CCDC97Q96F63 343 aaPredicted RBP10.05□□□□□ -0.8
HMGCS1-207ENST00000514610 UCN2Q96RP3 112 aa10.05□□□□□ -0.8
HMGCS1-207ENST00000514610 SKOR1P84550 965 aa10.04□□□□□ -0.8
HMGCS1-207ENST00000514610 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
HMGCS1-207ENST00000514610 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
HMGCS1-207ENST00000514610 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
HMGCS1-207ENST00000514610 ZBTB24O43167 697 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-207ENST00000514610 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
HMGCS1-207ENST00000514610 IRX2Q9BZI1 471 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-207ENST00000514610 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
HMGCS1-207ENST00000514610 RPIAP49247 311 aa10.02□□□□□ -0.81
HMGCS1-207ENST00000514610 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
HMGCS1-207ENST00000514610 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
HMGCS1-207ENST00000514610 ZBTB33Q86T24 672 aa10.01□□□□□ -0.81
HMGCS1-207ENST00000514610 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
HMGCS1-207ENST00000514610 PCDHB9Q9Y5E1 797 aa10.01□□□□□ -0.81
HMGCS1-207ENST00000514610 AGERQ15109 404 aa10□□□□□ -0.81
HMGCS1-207ENST00000514610 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
HMGCS1-207ENST00000514610 WNT7BP56706 349 aa9.98□□□□□ -0.81
HMGCS1-207ENST00000514610 CFAP70Q5T0N1 1121 aa9.98□□□□□ -0.81
HMGCS1-207ENST00000514610 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
HMGCS1-207ENST00000514610 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
HMGCS1-207ENST00000514610 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
HMGCS1-207ENST00000514610 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
HMGCS1-207ENST00000514610 PALM3A6NDB9 673 aaPredicted RBP9.96□□□□□ -0.82
HMGCS1-207ENST00000514610 SLC19A1P41440 591 aa9.96□□□□□ -0.82
HMGCS1-207ENST00000514610 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
HMGCS1-207ENST00000514610 TFIP11Q9UBB9 837 aaKnown RBP9.96□□□□□ -0.82
HMGCS1-207ENST00000514610 CD2BP2O95400 341 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-207ENST00000514610 TRMT44Q8IYL2 757 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-207ENST00000514610 PHTF2Q8N3S3 785 aa9.95□□□□□ -0.82
HMGCS1-207ENST00000514610 MCCD1P59942 119 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-207ENST00000514610 RC3H1Q5TC82 1133 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-207ENST00000514610 SLC10A4Q96EP9 437 aa9.94□□□□□ -0.82
HMGCS1-207ENST00000514610 ARXQ96QS3 562 aa9.94□□□□□ -0.82
HMGCS1-207ENST00000514610 VARSP26640 1264 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-207ENST00000514610 MAFBQ9Y5Q3 323 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-207ENST00000514610 ATP9BO43861 1147 aa9.92□□□□□ -0.82
HMGCS1-207ENST00000514610 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-207ENST00000514610 RFX1P22670 979 aa9.92□□□□□ -0.82
HMGCS1-207ENST00000514610 SPRYD7Q5W111 196 aa9.92□□□□□ -0.82
HMGCS1-207ENST00000514610 EHBP1Q8NDI1 1231 aa9.92□□□□□ -0.82
HMGCS1-207ENST00000514610 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
HMGCS1-207ENST00000514610 SRPK2P78362 688 aaKnown RBP9.91□□□□□ -0.82
HMGCS1-207ENST00000514610 TSGA10IPQ3SY00 556 aa9.91□□□□□ -0.82
HMGCS1-207ENST00000514610 NFATC2IPQ8NCF5 419 aa9.91□□□□□ -0.82
HMGCS1-207ENST00000514610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 ESPNB1AK53 854 aa9.9□□□□□ -0.82
HMGCS1-207ENST00000514610 SKIP12755 728 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms