RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 PPP2R1AP30153 589 aa26.66■■□□□ 1.86
SSBP2-218ENST00000514493 MORC1Q86VD1 984 aa26.66■■□□□ 1.86
SSBP2-218ENST00000514493 ATF3P18847 181 aa26.64■■□□□ 1.86
SSBP2-218ENST00000514493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.64■■□□□ 1.86
SSBP2-218ENST00000514493 NGDNQ8NEJ9 315 aaKnown RBP26.64■■□□□ 1.86
SSBP2-218ENST00000514493 PHF8Q9UPP1 1060 aa26.64■■□□□ 1.86
SSBP2-218ENST00000514493 CADPS2Q86UW7 1296 aa26.63■■□□□ 1.85
SSBP2-218ENST00000514493 GGNBP2Q9H3C7 697 aa26.63■■□□□ 1.85
SSBP2-218ENST00000514493 PIK3C2AO00443 1686 aa26.62■■□□□ 1.85
SSBP2-218ENST00000514493 USP54Q70EL1 1684 aa26.62■■□□□ 1.85
SSBP2-218ENST00000514493 TTC21BQ7Z4L5 1316 aa26.62■■□□□ 1.85
SSBP2-218ENST00000514493 ESCO1Q5FWF5 840 aa26.61■■□□□ 1.85
SSBP2-218ENST00000514493 TTC21AQ8NDW8 1320 aa26.59■■□□□ 1.85
SSBP2-218ENST00000514493 NME9Q86XW9 330 aa26.58■■□□□ 1.85
SSBP2-218ENST00000514493 OVOS2A0A0J9YW53 1432 aa26.58■■□□□ 1.84
SSBP2-218ENST00000514493 OVOS2Q6IE36 1432 aa26.58■■□□□ 1.84
SSBP2-218ENST00000514493 MARF1Q9Y4F3 1742 aaKnown RBP26.57■■□□□ 1.84
SSBP2-218ENST00000514493 UBAP1LF5GYI3 381 aa26.57■■□□□ 1.84
SSBP2-218ENST00000514493 IQSEC2Q5JU85 1478 aa26.57■■□□□ 1.84
SSBP2-218ENST00000514493 TRPM3Q9HCF6 1732 aaPredicted RBP26.57■■□□□ 1.84
SSBP2-218ENST00000514493 ORAI2Q96SN7 254 aa26.56■■□□□ 1.84
SSBP2-218ENST00000514493 MAP2P11137 1827 aaKnown RBP26.56■■□□□ 1.84
SSBP2-218ENST00000514493 SCAF1Q9H7N4 1312 aaKnown RBP26.54■■□□□ 1.84
SSBP2-218ENST00000514493 TNNT2P45379 298 aaPredicted RBP26.53■■□□□ 1.84
SSBP2-218ENST00000514493 PNISRQ8TF01 805 aaKnown RBP26.52■■□□□ 1.84
SSBP2-218ENST00000514493 COG3Q96JB2 828 aa26.51■■□□□ 1.83
SSBP2-218ENST00000514493 USP31Q70CQ4 1352 aa26.51■■□□□ 1.83
SSBP2-218ENST00000514493 PIP4K2BP78356 416 aa26.51■■□□□ 1.83
SSBP2-218ENST00000514493 ZRANB1Q9UGI0 708 aa26.51■■□□□ 1.83
SSBP2-218ENST00000514493 SHPRHQ149N8 1683 aa26.5■■□□□ 1.83
SSBP2-218ENST00000514493 FAM9BQ8IZU0 186 aa26.5■■□□□ 1.83
SSBP2-218ENST00000514493 TOM1O60784 492 aa26.49■■□□□ 1.83
SSBP2-218ENST00000514493 AATKQ6ZMQ8 1374 aa26.48■■□□□ 1.83
SSBP2-218ENST00000514493 ALS2Q96Q42 1657 aa26.47■■□□□ 1.83
SSBP2-218ENST00000514493 SMG6Q86US8 1419 aaKnown RBP26.47■■□□□ 1.83
SSBP2-218ENST00000514493 PSME1Q06323 249 aa26.47■■□□□ 1.83
SSBP2-218ENST00000514493 FOXO3O43524 673 aa26.46■■□□□ 1.83
SSBP2-218ENST00000514493 SLAIN2Q9P270 581 aa26.46■■□□□ 1.83
SSBP2-218ENST00000514493 FBXO41Q8TF61 875 aa26.46■■□□□ 1.83
SSBP2-218ENST00000514493 MTHFSP49914 203 aa26.45■■□□□ 1.82
SSBP2-218ENST00000514493 COL3A1P02461 1466 aaPredicted RBP26.44■■□□□ 1.82
SSBP2-218ENST00000514493 PXDNQ92626 1479 aa26.43■■□□□ 1.82
SSBP2-218ENST00000514493 NHSL1Q5SYE7 1610 aa26.42■■□□□ 1.82
SSBP2-218ENST00000514493 PAK3O75914 559 aaPredicted RBP26.42■■□□□ 1.82
SSBP2-218ENST00000514493 HNRNPUQ00839 825 aaKnown RBP eCLIP26.42■■□□□ 1.82
SSBP2-218ENST00000514493 NPHP3Q7Z494 1330 aa26.42■■□□□ 1.82
SSBP2-218ENST00000514493 INSRP06213 1382 aa26.42■■□□□ 1.82
SSBP2-218ENST00000514493 CDK12Q9NYV4 1490 aaPredicted RBP26.41■■□□□ 1.82
SSBP2-218ENST00000514493 BRINP3Q76B58 766 aa26.41■■□□□ 1.82
SSBP2-218ENST00000514493 CFAP53Q96M91 514 aa26.41■■□□□ 1.82
SSBP2-218ENST00000514493 KRT28Q7Z3Y7 464 aa26.39■■□□□ 1.82
SSBP2-218ENST00000514493 ABTB2Q8N961 1025 aa26.39■■□□□ 1.82
SSBP2-218ENST00000514493 NLRP6P59044 892 aa26.38■■□□□ 1.81
SSBP2-218ENST00000514493 XPCQ01831 940 aaPredicted RBP26.38■■□□□ 1.81
SSBP2-218ENST00000514493 POLKQ9UBT6 870 aa26.38■■□□□ 1.81
SSBP2-218ENST00000514493 PNPLA6Q8IY17 1366 aa26.38■■□□□ 1.81
SSBP2-218ENST00000514493 BLMP54132 1417 aaPredicted RBP26.38■■□□□ 1.81
SSBP2-218ENST00000514493 SBNO1A3KN83 1393 aa26.38■■□□□ 1.81
SSBP2-218ENST00000514493 ILDR1Q86SU0 546 aaPredicted RBP26.38■■□□□ 1.81
SSBP2-218ENST00000514493 PEAK1Q9H792 1746 aa26.38■■□□□ 1.81
SSBP2-218ENST00000514493 WDR43Q15061 677 aaKnown RBP eCLIP26.36■■□□□ 1.81
SSBP2-218ENST00000514493 LTN1O94822 1766 aa26.36■■□□□ 1.81
SSBP2-218ENST00000514493 SLIT3O75094 1523 aa26.36■■□□□ 1.81
SSBP2-218ENST00000514493 FBLN1P23142 703 aa26.35■■□□□ 1.81
SSBP2-218ENST00000514493 ROBO1Q9Y6N7 1651 aa26.35■■□□□ 1.81
SSBP2-218ENST00000514493 NFAT5O94916 1531 aa26.35■■□□□ 1.81
SSBP2-218ENST00000514493 TNS3Q68CZ2 1445 aa26.34■■□□□ 1.81
SSBP2-218ENST00000514493 DDX17Q92841 729 aaKnown RBP26.33■■□□□ 1.81
SSBP2-218ENST00000514493 EMILIN1Q9Y6C2 1016 aa26.33■■□□□ 1.81
SSBP2-218ENST00000514493 CRYBG1Q9Y4K1 1723 aa26.33■■□□□ 1.81
SSBP2-218ENST00000514493 NUTM2GQ5VZR2 741 aa26.33■■□□□ 1.8
SSBP2-218ENST00000514493 RRS1Q15050 365 aaKnown RBP26.32■■□□□ 1.8
SSBP2-218ENST00000514493 PHRF1Q9P1Y6 1649 aaKnown RBP26.31■■□□□ 1.8
SSBP2-218ENST00000514493 MED1Q15648 1581 aaPredicted RBP26.31■■□□□ 1.8
SSBP2-218ENST00000514493 ADAMTS8Q9UP79 889 aa26.3■■□□□ 1.8
SSBP2-218ENST00000514493 USP19O94966 1318 aa26.29■■□□□ 1.8
SSBP2-218ENST00000514493 ZBED9Q6R2W3 1325 aa26.29■■□□□ 1.8
SSBP2-218ENST00000514493 PPM1GO15355 546 aaPredicted RBP26.28■■□□□ 1.8
SSBP2-218ENST00000514493 AHDC1Q5TGY3 1603 aaPredicted RBP26.27■■□□□ 1.8
SSBP2-218ENST00000514493 SOS2Q07890 1332 aaPredicted RBP26.27■■□□□ 1.8
SSBP2-218ENST00000514493 SOX12O15370 315 aa26.27■■□□□ 1.8
SSBP2-218ENST00000514493 HSPA1LP34931 641 aa26.27■■□□□ 1.8
SSBP2-218ENST00000514493 MAP3K19Q56UN5 1328 aa26.27■■□□□ 1.8
SSBP2-218ENST00000514493 ARHGEF10O15013 1369 aa26.26■■□□□ 1.79
SSBP2-218ENST00000514493 KIF24Q5T7B8 1368 aa26.26■■□□□ 1.79
SSBP2-218ENST00000514493 SPATA31A3Q5VYP0 1347 aa26.26■■□□□ 1.79
SSBP2-218ENST00000514493 FLT4P35916 1363 aa26.25■■□□□ 1.79
SSBP2-218ENST00000514493 DIAPH1O60610 1272 aaKnown RBP26.25■■□□□ 1.79
SSBP2-218ENST00000514493 LMOD2Q6P5Q4 547 aa26.24■■□□□ 1.79
SSBP2-218ENST00000514493 KCNH5Q8NCM2 988 aa26.24■■□□□ 1.79
SSBP2-218ENST00000514493 ABCA3Q99758 1704 aa26.23■■□□□ 1.79
SSBP2-218ENST00000514493 NUDCQ9Y266 331 aa26.23■■□□□ 1.79
SSBP2-218ENST00000514493 RTL1A6NKG5 1358 aa26.23■■□□□ 1.79
SSBP2-218ENST00000514493 RGPD1P0DJD0 1748 aa26.22■■□□□ 1.79
SSBP2-218ENST00000514493 U2AF1L5P0DN76 240 aaPredicted RBP26.18■■□□□ 1.78
SSBP2-218ENST00000514493 U2AF1Q01081 240 aaKnown RBP eCLIP26.18■■□□□ 1.78
SSBP2-218ENST00000514493 GCP02774 474 aa26.18■■□□□ 1.78
SSBP2-218ENST00000514493 IL13P35225 146 aa26.18■■□□□ 1.78
SSBP2-218ENST00000514493 PHLPP1O60346 1717 aa26.17■■□□□ 1.78
SSBP2-218ENST00000514493 U2SURPO15042 1029 aaKnown RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms