RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 TSC1Q92574 1164 aa7.05□□□□□ -1.28
CALCOCO2-223ENST00000514267 FAM117AQ9C073 453 aa7.05□□□□□ -1.28
CALCOCO2-223ENST00000514267 POLR3EQ9NVU0 708 aa7.05□□□□□ -1.28
CALCOCO2-223ENST00000514267 F12P00748 615 aaPredicted RBP7.04□□□□□ -1.28
CALCOCO2-223ENST00000514267 VARSP26640 1264 aaKnown RBP7.04□□□□□ -1.28
CALCOCO2-223ENST00000514267 QPCTQ16769 361 aa7.04□□□□□ -1.28
CALCOCO2-223ENST00000514267 MPNDQ8N594 471 aa7.04□□□□□ -1.28
CALCOCO2-223ENST00000514267 ZNF511Q8NB15 262 aa7.04□□□□□ -1.28
CALCOCO2-223ENST00000514267 MRGPRX2Q96LB1 330 aa7.04□□□□□ -1.28
CALCOCO2-223ENST00000514267 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.04□□□□□ -1.28
CALCOCO2-223ENST00000514267 ZC3H4Q9UPT8 1303 aaKnown RBP7.03□□□□□ -1.28
CALCOCO2-223ENST00000514267 AVPP01185 164 aa7.03□□□□□ -1.28
CALCOCO2-223ENST00000514267 ERICH6Q7L0X2 663 aa7.03□□□□□ -1.28
CALCOCO2-223ENST00000514267 BPHLQ86WA6 291 aaPredicted RBP7.03□□□□□ -1.28
CALCOCO2-223ENST00000514267 APBB1O00213 710 aa7.02□□□□□ -1.29
CALCOCO2-223ENST00000514267 SMCPP49901 116 aaPredicted RBP7.02□□□□□ -1.29
CALCOCO2-223ENST00000514267 FAM174AQ8TBP5 190 aa7.02□□□□□ -1.29
CALCOCO2-223ENST00000514267 TMEM259Q4ZIN3 620 aa7.01□□□□□ -1.29
CALCOCO2-223ENST00000514267 PTCRAQ6ISU1 281 aaPredicted RBP7.01□□□□□ -1.29
CALCOCO2-223ENST00000514267 TRIM52Q96A61 297 aa7.01□□□□□ -1.29
CALCOCO2-223ENST00000514267 BRPF1P55201 1214 aaPredicted RBP7□□□□□ -1.29
CALCOCO2-223ENST00000514267 SH3BP2P78314 561 aa7□□□□□ -1.29
CALCOCO2-223ENST00000514267 SKOR1P84550 965 aa7□□□□□ -1.29
CALCOCO2-223ENST00000514267 RTL5Q5HYW3 569 aaPredicted RBP7□□□□□ -1.29
CALCOCO2-223ENST00000514267 BAP1Q92560 729 aa7□□□□□ -1.29
CALCOCO2-223ENST00000514267 WASF2Q9Y6W5 498 aa7□□□□□ -1.29
CALCOCO2-223ENST00000514267 MYT1Q01538 1121 aa6.99□□□□□ -1.29
CALCOCO2-223ENST00000514267 TMEM132AQ24JP5 1023 aa6.99□□□□□ -1.29
CALCOCO2-223ENST00000514267 SOCS7O14512 581 aa6.98□□□□□ -1.29
CALCOCO2-223ENST00000514267 AGERQ15109 404 aa6.98□□□□□ -1.29
CALCOCO2-223ENST00000514267 MAP10Q9P2G4 905 aa6.98□□□□□ -1.29
CALCOCO2-223ENST00000514267 CDV3Q9UKY7 258 aaKnown RBP6.98□□□□□ -1.29
CALCOCO2-223ENST00000514267 GPSM3Q9Y4H4 160 aa6.98□□□□□ -1.29
CALCOCO2-223ENST00000514267 AXIN1O15169 862 aa6.97□□□□□ -1.29
CALCOCO2-223ENST00000514267 ALDH1A1P00352 501 aa6.97□□□□□ -1.29
CALCOCO2-223ENST00000514267 ZNF592Q92610 1267 aa6.97□□□□□ -1.29
CALCOCO2-223ENST00000514267 PER1O15534 1290 aaPredicted RBP6.96□□□□□ -1.3
CALCOCO2-223ENST00000514267 SIAH2O43255 324 aa6.96□□□□□ -1.3
CALCOCO2-223ENST00000514267 AP1G2O75843 785 aa6.96□□□□□ -1.3
CALCOCO2-223ENST00000514267 SMPD1P17405 629 aa6.96□□□□□ -1.3
CALCOCO2-223ENST00000514267 LINC01559Q495D7 138 aa6.96□□□□□ -1.3
CALCOCO2-223ENST00000514267 PROCA1Q8NCQ7 364 aaPredicted RBP6.96□□□□□ -1.3
CALCOCO2-223ENST00000514267 RFC5P40937 340 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 PDXDC2PQ6P474 469 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 TRMT44Q8IYL2 757 aaKnown RBP6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 IL27Q8NEV9 243 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 SENP2Q9HC62 589 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 AAASQ9NRG9 546 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 FKBPLQ9UIM3 349 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 MAP4K5Q9Y4K4 846 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 GTF3C3Q9Y5Q9 886 aa6.95□□□□□ -1.3
CALCOCO2-223ENST00000514267 ADH1CP00326 375 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 USP17L8P0C7I0 530 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 PTK2Q05397 1052 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 CTDSPL2Q05D32 466 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 NR5A1Q13285 461 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 KIFC2Q96AC6 838 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 CDK15Q96Q40 435 aa6.94□□□□□ -1.3
CALCOCO2-223ENST00000514267 ZNF787Q6DD87 383 aa6.93□□□□□ -1.3
CALCOCO2-223ENST00000514267 PRM3Q9NNZ6 103 aa6.93□□□□□ -1.3
CALCOCO2-223ENST00000514267 J3QL48 77 aa6.92□□□□□ -1.3
CALCOCO2-223ENST00000514267 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
CALCOCO2-223ENST00000514267 SH3RF1Q7Z6J0 888 aa6.92□□□□□ -1.3
CALCOCO2-223ENST00000514267 ARHGAP9Q9BRR9 750 aa6.92□□□□□ -1.3
CALCOCO2-223ENST00000514267 C1QTNF2Q9BXJ5 285 aa6.92□□□□□ -1.3
CALCOCO2-223ENST00000514267 CCDC125Q86Z20 511 aa6.91□□□□□ -1.3
CALCOCO2-223ENST00000514267 LCE2BO14633 110 aa6.9□□□□□ -1.3
CALCOCO2-223ENST00000514267 NNTQ13423 1086 aa6.9□□□□□ -1.3
CALCOCO2-223ENST00000514267 NBPF20Q3BBV1 942 aa6.9□□□□□ -1.3
CALCOCO2-223ENST00000514267 SLC10A4Q96EP9 437 aa6.9□□□□□ -1.3
CALCOCO2-223ENST00000514267 TLL2Q9Y6L7 1015 aa6.9□□□□□ -1.3
CALCOCO2-223ENST00000514267 CAPN5O15484 640 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 MCCD1P59942 119 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 ZBTB33Q86T24 672 aa6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 LRRN4Q8WUT4 740 aa6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 HPS1Q92902 700 aa6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 FOXJ1Q92949 421 aa6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 TIMELESSQ9UNS1 1208 aa6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 ZNF330Q9Y3S2 320 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-223ENST00000514267 MAGEB6P1A0A0J9YX57 407 aa6.88□□□□□ -1.31
CALCOCO2-223ENST00000514267 ST8SIA5O15466 376 aa6.88□□□□□ -1.31
CALCOCO2-223ENST00000514267 VASH1Q7L8A9 365 aaPredicted RBP6.88□□□□□ -1.31
CALCOCO2-223ENST00000514267 UPP2O95045 317 aa6.87□□□□□ -1.31
CALCOCO2-223ENST00000514267 ARID5BQ14865 1188 aa6.87□□□□□ -1.31
CALCOCO2-223ENST00000514267 NR6A1Q15406 480 aa6.87□□□□□ -1.31
CALCOCO2-223ENST00000514267 ATP13A2Q9NQ11 1180 aa6.87□□□□□ -1.31
CALCOCO2-223ENST00000514267 EMILIN1Q9Y6C2 1016 aa6.87□□□□□ -1.31
CALCOCO2-223ENST00000514267 SCARF1Q14162 830 aa6.86□□□□□ -1.31
CALCOCO2-223ENST00000514267 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
CALCOCO2-223ENST00000514267 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
CALCOCO2-223ENST00000514267 C11orf95C9JLR9 678 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-223ENST00000514267 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
CALCOCO2-223ENST00000514267 TRIM47Q96LD4 638 aa6.85□□□□□ -1.31
CALCOCO2-223ENST00000514267 CARD14Q9BXL6 1004 aa6.85□□□□□ -1.31
CALCOCO2-223ENST00000514267 NDUFB9Q9Y6M9 179 aa6.85□□□□□ -1.31
CALCOCO2-223ENST00000514267 FSHRP23945 695 aa6.84□□□□□ -1.31
CALCOCO2-223ENST00000514267 WDR4P57081 412 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-223ENST00000514267 SEPT12Q8IYM1 358 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms