RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 NUTM2DQ5VT03 806 aaPredicted RBP6.71□□□□□ -1.34
SGCB-203ENST00000514133 DESI1Q6ICB0 168 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 RSBN1LQ6PCB5 846 aaPredicted RBP6.71□□□□□ -1.34
SGCB-203ENST00000514133 RNF19BQ6ZMZ0 732 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 LIAT1Q6ZQX7 453 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 NUTM2AQ8IVF1 878 aaPredicted RBP6.71□□□□□ -1.34
SGCB-203ENST00000514133 TBC1D2BQ9UPU7 963 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 FCF1Q9Y324 198 aaKnown RBP6.71□□□□□ -1.34
SGCB-203ENST00000514133 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
SGCB-203ENST00000514133 PPEF1O14829 653 aaPredicted RBP6.7□□□□□ -1.34
SGCB-203ENST00000514133 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
SGCB-203ENST00000514133 GLMNQ92990 594 aa6.7□□□□□ -1.34
SGCB-203ENST00000514133 PCDHB15Q9Y5E8 787 aa6.7□□□□□ -1.34
SGCB-203ENST00000514133 PPP1R15AO75807 674 aaPredicted RBP6.69□□□□□ -1.34
SGCB-203ENST00000514133 DGAT1O75907 488 aa6.69□□□□□ -1.34
SGCB-203ENST00000514133 EMID1Q96A84 441 aaPredicted RBP6.69□□□□□ -1.34
SGCB-203ENST00000514133 GDF9O60383 454 aa6.68□□□□□ -1.34
SGCB-203ENST00000514133 LILRB3O75022 631 aa6.68□□□□□ -1.34
SGCB-203ENST00000514133 JUNDP17535 347 aa6.68□□□□□ -1.34
SGCB-203ENST00000514133 IRF5Q13568 498 aa6.68□□□□□ -1.34
SGCB-203ENST00000514133 RTL5Q5HYW3 569 aaPredicted RBP6.68□□□□□ -1.34
SGCB-203ENST00000514133 PRPF38BQ5VTL8 546 aaKnown RBP6.68□□□□□ -1.34
SGCB-203ENST00000514133 TRAF7Q6Q0C0 670 aa6.68□□□□□ -1.34
SGCB-203ENST00000514133 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
SGCB-203ENST00000514133 CABLES1Q8TDN4 633 aa6.67□□□□□ -1.34
SGCB-203ENST00000514133 SOCS7O14512 581 aa6.66□□□□□ -1.34
SGCB-203ENST00000514133 WNT7BP56706 349 aa6.66□□□□□ -1.34
SGCB-203ENST00000514133 MTMR2Q13614 643 aa6.66□□□□□ -1.34
SGCB-203ENST00000514133 PLA2G2CQ5R387 149 aa6.66□□□□□ -1.34
SGCB-203ENST00000514133 TRIM67Q6ZTA4 783 aa6.66□□□□□ -1.34
SGCB-203ENST00000514133 GZF1Q9H116 711 aaPredicted RBP6.66□□□□□ -1.34
SGCB-203ENST00000514133 C6orf229H3BNL8 230 aa6.65□□□□□ -1.34
SGCB-203ENST00000514133 RFX1P22670 979 aa6.65□□□□□ -1.34
SGCB-203ENST00000514133 PDE4CQ08493 712 aa6.65□□□□□ -1.34
SGCB-203ENST00000514133 PTPRNQ16849 979 aa6.65□□□□□ -1.34
SGCB-203ENST00000514133 PKDCCQ504Y2 493 aa6.65□□□□□ -1.34
SGCB-203ENST00000514133 HDGFL1Q5TGJ6 251 aa6.65□□□□□ -1.34
SGCB-203ENST00000514133 TMCO4Q5TGY1 634 aa6.65□□□□□ -1.34
SGCB-203ENST00000514133 WNT7AO00755 349 aa6.64□□□□□ -1.35
SGCB-203ENST00000514133 TRIM32Q13049 653 aa6.64□□□□□ -1.35
SGCB-203ENST00000514133 ZBTB3Q9H5J0 574 aa6.64□□□□□ -1.35
SGCB-203ENST00000514133 PRDM9Q9NQV7 894 aa6.64□□□□□ -1.35
SGCB-203ENST00000514133 PCDHGC3Q9UN70 934 aa6.64□□□□□ -1.35
SGCB-203ENST00000514133 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
SGCB-203ENST00000514133 NUDT12Q9BQG2 462 aa6.63□□□□□ -1.35
SGCB-203ENST00000514133 CCNYL3P0C7X3 344 aa6.62□□□□□ -1.35
SGCB-203ENST00000514133 CYP4X1Q8N118 509 aa6.62□□□□□ -1.35
SGCB-203ENST00000514133 TSC1Q92574 1164 aa6.62□□□□□ -1.35
SGCB-203ENST00000514133 HLA-CQ95604 372 aa6.62□□□□□ -1.35
SGCB-203ENST00000514133 PBXIP1Q96AQ6 731 aa6.62□□□□□ -1.35
SGCB-203ENST00000514133 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
SGCB-203ENST00000514133 PKD2L1Q9P0L9 805 aa6.62□□□□□ -1.35
SGCB-203ENST00000514133 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
SGCB-203ENST00000514133 MFAP1P55081 439 aaKnown RBP6.61□□□□□ -1.35
SGCB-203ENST00000514133 GUCA2AQ02747 115 aa6.61□□□□□ -1.35
SGCB-203ENST00000514133 CTDSPL2Q05D32 466 aa6.61□□□□□ -1.35
SGCB-203ENST00000514133 WASHC4Q2M389 1173 aa6.61□□□□□ -1.35
SGCB-203ENST00000514133 CTC1Q2NKJ3 1217 aa6.61□□□□□ -1.35
SGCB-203ENST00000514133 CRIPAKQ8N1N5 446 aa6.61□□□□□ -1.35
SGCB-203ENST00000514133 EVA1BQ9NVM1 165 aa6.61□□□□□ -1.35
SGCB-203ENST00000514133 TOR4AQ9NXH8 423 aa6.61□□□□□ -1.35
SGCB-203ENST00000514133 AVPP01185 164 aa6.6□□□□□ -1.35
SGCB-203ENST00000514133 VAC14Q08AM6 782 aa6.6□□□□□ -1.35
SGCB-203ENST00000514133 CCDC24Q8N4L8 307 aa6.6□□□□□ -1.35
SGCB-203ENST00000514133 RGS22Q8NE09 1264 aa6.6□□□□□ -1.35
SGCB-203ENST00000514133 SNIP1Q8TAD8 396 aaKnown RBP6.6□□□□□ -1.35
SGCB-203ENST00000514133 PRR7Q8TB68 274 aa6.6□□□□□ -1.35
SGCB-203ENST00000514133 ADAMTS19Q8TE59 1207 aa6.6□□□□□ -1.35
SGCB-203ENST00000514133 HMX1Q9NP08 348 aaPredicted RBP6.6□□□□□ -1.35
SGCB-203ENST00000514133 MTMR7Q9Y216 660 aa6.6□□□□□ -1.35
SGCB-203ENST00000514133 CSB-PGBD3P0DP91 1061 aa6.59□□□□□ -1.35
SGCB-203ENST00000514133 LYPD8Q6UX82 237 aa6.59□□□□□ -1.35
SGCB-203ENST00000514133 SYMPKQ92797 1274 aaKnown RBP6.59□□□□□ -1.35
SGCB-203ENST00000514133 PATL2C9JE40 543 aaKnown RBP6.58□□□□□ -1.36
SGCB-203ENST00000514133 TNFRSF10AO00220 468 aa6.58□□□□□ -1.36
SGCB-203ENST00000514133 SMCPP49901 116 aaPredicted RBP6.58□□□□□ -1.36
SGCB-203ENST00000514133 KCNH2Q12809 1159 aa6.58□□□□□ -1.36
SGCB-203ENST00000514133 FOXC1Q12948 553 aa6.58□□□□□ -1.36
SGCB-203ENST00000514133 CFAP70Q5T0N1 1121 aa6.58□□□□□ -1.36
SGCB-203ENST00000514133 MPNDQ8N594 471 aa6.58□□□□□ -1.36
SGCB-203ENST00000514133 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
SGCB-203ENST00000514133 PPP1R12CQ9BZL4 782 aa6.58□□□□□ -1.36
SGCB-203ENST00000514133 TTC24A2A3L6 582 aaPredicted RBP6.57□□□□□ -1.36
SGCB-203ENST00000514133 FAM187AA6NFU0 413 aa6.57□□□□□ -1.36
SGCB-203ENST00000514133 LMOD1P29536 600 aaPredicted RBP6.57□□□□□ -1.36
SGCB-203ENST00000514133 MYT1Q01538 1121 aa6.57□□□□□ -1.36
SGCB-203ENST00000514133 ARMC2Q8NEN0 867 aa6.57□□□□□ -1.36
SGCB-203ENST00000514133 LRRN4Q8WUT4 740 aa6.57□□□□□ -1.36
SGCB-203ENST00000514133 TRIM34Q9BYJ4 488 aa6.57□□□□□ -1.36
SGCB-203ENST00000514133 CARNS1A5YM72 827 aa6.56□□□□□ -1.36
SGCB-203ENST00000514133 BRD1O95696 1058 aa6.56□□□□□ -1.36
SGCB-203ENST00000514133 RC3H1Q5TC82 1133 aaKnown RBP6.56□□□□□ -1.36
SGCB-203ENST00000514133 FOXD4L5Q5VV16 416 aaPredicted RBP6.56□□□□□ -1.36
SGCB-203ENST00000514133 FOXD4L4Q8WXT5 416 aaPredicted RBP6.56□□□□□ -1.36
SGCB-203ENST00000514133 PALM3A6NDB9 673 aaPredicted RBP6.55□□□□□ -1.36
SGCB-203ENST00000514133 KCNA1Q09470 495 aa6.55□□□□□ -1.36
SGCB-203ENST00000514133 UNC93B1Q9H1C4 597 aa6.55□□□□□ -1.36
SGCB-203ENST00000514133 USTQ9Y2C2 406 aa6.55□□□□□ -1.36
SGCB-203ENST00000514133 CFAP99D6REC4 459 aa6.54□□□□□ -1.36
SGCB-203ENST00000514133 VARSP26640 1264 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms