RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 SND1Q7KZF4 910 aaKnown RBP eCLIP8.42□□□□□ -1.06
CALCOCO2-222ENST00000514006 CDAN1Q8IWY9 1227 aa8.42□□□□□ -1.06
CALCOCO2-222ENST00000514006 ZC3H4Q9UPT8 1303 aaKnown RBP8.42□□□□□ -1.06
CALCOCO2-222ENST00000514006 PIK3CDO00329 1044 aa8.41□□□□□ -1.06
CALCOCO2-222ENST00000514006 KANK4Q5T7N3 995 aaPredicted RBP8.41□□□□□ -1.06
CALCOCO2-222ENST00000514006 SALL2Q9Y467 1007 aaPredicted RBP8.41□□□□□ -1.06
CALCOCO2-222ENST00000514006 USP17L3A6NCW0 530 aa8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 USP17L4A6NCW7 530 aa8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 TK2O00142 265 aa8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 F12P00748 615 aaPredicted RBP8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 SKIP12755 728 aa8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 USP17L2Q6R6M4 530 aa8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 USP17L1Q7RTZ2 530 aa8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.06
CALCOCO2-222ENST00000514006 FMNL1O95466 1100 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-222ENST00000514006 PTPRNQ16849 979 aa8.39□□□□□ -1.07
CALCOCO2-222ENST00000514006 BRICD5Q6PL45 260 aa8.39□□□□□ -1.07
CALCOCO2-222ENST00000514006 MAP10Q9P2G4 905 aa8.39□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 JUNDP17535 347 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 CTHP32929 405 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 EMP3P54852 163 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 PLEKHM2Q8IWE5 1019 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 ZNF592Q92610 1267 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-222ENST00000514006 NR1I2O75469 434 aa8.37□□□□□ -1.07
CALCOCO2-222ENST00000514006 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
CALCOCO2-222ENST00000514006 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
CALCOCO2-222ENST00000514006 STK32AQ8WU08 396 aa8.37□□□□□ -1.07
CALCOCO2-222ENST00000514006 PPP4CP60510 307 aa8.36□□□□□ -1.07
CALCOCO2-222ENST00000514006 PCDHB3Q9Y5E6 796 aa8.36□□□□□ -1.07
CALCOCO2-222ENST00000514006 FAM196BA6NMK8 535 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 SLFNL1Q499Z3 407 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 DEPDC4Q8N2C3 294 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 ARMC2Q8NEN0 867 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 ANKK1Q8NFD2 765 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 FAM174AQ8TBP5 190 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 THAP11Q96EK4 314 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
CALCOCO2-222ENST00000514006 GOLGA8CPA6NN73 597 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L21D6R901 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 APLP1P51693 650 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 MCCD1P59942 119 aaPredicted RBP8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 PTK2Q05397 1052 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 LARP1Q6PKG0 1096 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 MKRN1Q9UHC7 482 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 AMOTL2Q9Y2J4 779 aa8.34□□□□□ -1.07
CALCOCO2-222ENST00000514006 FAM205CA6NFA0 338 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 E9PSI1 815 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 ADGRD1Q6QNK2 874 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 RNF135Q8IUD6 432 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 MARVELD3Q96A59 401 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 CEP126Q9P2H0 1117 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 PCDHB9Q9Y5E1 797 aa8.33□□□□□ -1.08
CALCOCO2-222ENST00000514006 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
CALCOCO2-222ENST00000514006 ATP5J2-PTCD1G3V325 749 aa8.32□□□□□ -1.08
CALCOCO2-222ENST00000514006 ST18O60284 1047 aa8.32□□□□□ -1.08
CALCOCO2-222ENST00000514006 NCOA4Q13772 614 aa8.32□□□□□ -1.08
CALCOCO2-222ENST00000514006 NBPF14Q5TI25 921 aa8.32□□□□□ -1.08
CALCOCO2-222ENST00000514006 PDXDC2PQ6P474 469 aa8.32□□□□□ -1.08
CALCOCO2-222ENST00000514006 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
CALCOCO2-222ENST00000514006 LZTS3O60299 673 aaPredicted RBP8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 RASA1P20936 1047 aa8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 MSS51Q4VC12 460 aa8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 CRTC2Q53ET0 693 aaPredicted RBP8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 PLPP7Q8NBV4 271 aa8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 FAM200AQ8TCP9 573 aa8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 NUDT12Q9BQG2 462 aa8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 EVA1BQ9NVM1 165 aa8.31□□□□□ -1.08
CALCOCO2-222ENST00000514006 BCAMP50895 628 aa8.3□□□□□ -1.08
CALCOCO2-222ENST00000514006 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
CALCOCO2-222ENST00000514006 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
CALCOCO2-222ENST00000514006 PTK7Q13308 1070 aa8.3□□□□□ -1.08
CALCOCO2-222ENST00000514006 MYT1LQ9UL68 1186 aa8.3□□□□□ -1.08
CALCOCO2-222ENST00000514006 HRO43593 1189 aa8.29□□□□□ -1.08
CALCOCO2-222ENST00000514006 DXOO77932 396 aaKnown RBP8.29□□□□□ -1.08
CALCOCO2-222ENST00000514006 ARID4AP29374 1257 aaPredicted RBP8.29□□□□□ -1.08
CALCOCO2-222ENST00000514006 EML3Q32P44 896 aa8.29□□□□□ -1.08
CALCOCO2-222ENST00000514006 PHLDB3Q6NSJ2 640 aa8.29□□□□□ -1.08
CALCOCO2-222ENST00000514006 CDCA7Q9BWT1 371 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms