RNA–Protein interactions for RNA: ENST00000513893.5

LINC00461-215, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-215ENST00000513893 POLR3AO14802 1390 aaPredicted RBP23.43■■□□□ 1.34
LINC00461-215ENST00000513893 ABCA3Q99758 1704 aa23.43■■□□□ 1.34
LINC00461-215ENST00000513893 CABP1Q9NZU7 370 aa23.43■■□□□ 1.34
LINC00461-215ENST00000513893 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
LINC00461-215ENST00000513893 MARF1Q9Y4F3 1742 aaKnown RBP23.42■■□□□ 1.34
LINC00461-215ENST00000513893 SLIT2O94813 1529 aa23.42■■□□□ 1.34
LINC00461-215ENST00000513893 FAM83GA6ND36 823 aa23.41■■□□□ 1.34
LINC00461-215ENST00000513893 EVC2Q86UK5 1308 aa23.39■■□□□ 1.34
LINC00461-215ENST00000513893 UNC5CLQ8IV45 518 aa23.39■■□□□ 1.33
LINC00461-215ENST00000513893 CDK12Q9NYV4 1490 aaPredicted RBP23.37■■□□□ 1.33
LINC00461-215ENST00000513893 GJD4Q96KN9 370 aaPredicted RBP23.35■■□□□ 1.33
LINC00461-215ENST00000513893 ZC3H6P61129 1189 aaKnown RBP23.34■■□□□ 1.33
LINC00461-215ENST00000513893 CHRNA2Q15822 529 aa23.34■■□□□ 1.33
LINC00461-215ENST00000513893 ABTB2Q8N961 1025 aa23.34■■□□□ 1.33
LINC00461-215ENST00000513893 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
LINC00461-215ENST00000513893 CRYBG1Q9Y4K1 1723 aa23.33■■□□□ 1.33
LINC00461-215ENST00000513893 PLCH1Q4KWH8 1693 aa23.33■■□□□ 1.33
LINC00461-215ENST00000513893 BTG4Q9NY30 223 aa23.33■■□□□ 1.33
LINC00461-215ENST00000513893 GLI3P10071 1580 aa23.32■■□□□ 1.32
LINC00461-215ENST00000513893 CCDC9Q9Y3X0 531 aaKnown RBP23.32■■□□□ 1.32
LINC00461-215ENST00000513893 KIAA0232Q92628 1395 aa23.31■■□□□ 1.32
LINC00461-215ENST00000513893 USP6P35125 1406 aa23.31■■□□□ 1.32
LINC00461-215ENST00000513893 PRDM11Q9NQV5 511 aa23.3■■□□□ 1.32
LINC00461-215ENST00000513893 ST20-MTHFSA0A0A6YYL1 179 aa23.29■■□□□ 1.32
LINC00461-215ENST00000513893 VPS72Q15906 364 aa23.28■■□□□ 1.32
LINC00461-215ENST00000513893 PHRF1Q9P1Y6 1649 aaKnown RBP23.28■■□□□ 1.32
LINC00461-215ENST00000513893 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.28■■□□□ 1.32
LINC00461-215ENST00000513893 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.31
LINC00461-215ENST00000513893 TESK2Q96S53 571 aa23.26■■□□□ 1.31
LINC00461-215ENST00000513893 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
LINC00461-215ENST00000513893 ZBTB7CA1YPR0 619 aa23.25■■□□□ 1.31
LINC00461-215ENST00000513893 CCER1Q8TC90 406 aaPredicted RBP23.25■■□□□ 1.31
LINC00461-215ENST00000513893 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
LINC00461-215ENST00000513893 USP19O94966 1318 aa23.25■■□□□ 1.31
LINC00461-215ENST00000513893 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
LINC00461-215ENST00000513893 NRAPQ86VF7 1730 aa23.25■■□□□ 1.31
LINC00461-215ENST00000513893 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
LINC00461-215ENST00000513893 NLRP6P59044 892 aa23.24■■□□□ 1.31
LINC00461-215ENST00000513893 COL14A1Q05707 1796 aaKnown RBP23.24■■□□□ 1.31
LINC00461-215ENST00000513893 SLC12A5Q9H2X9 1139 aa23.23■■□□□ 1.31
LINC00461-215ENST00000513893 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
LINC00461-215ENST00000513893 ZRANB1Q9UGI0 708 aa23.23■■□□□ 1.31
LINC00461-215ENST00000513893 TTC21BQ7Z4L5 1316 aa23.23■■□□□ 1.31
LINC00461-215ENST00000513893 NWD2Q9ULI1 1742 aa23.22■■□□□ 1.31
LINC00461-215ENST00000513893 NLRP13Q86W25 1043 aa23.22■■□□□ 1.31
LINC00461-215ENST00000513893 SEPT12Q8IYM1 358 aa23.22■■□□□ 1.31
LINC00461-215ENST00000513893 SOX12O15370 315 aa23.21■■□□□ 1.31
LINC00461-215ENST00000513893 GCP02774 474 aa23.21■■□□□ 1.31
LINC00461-215ENST00000513893 FAM98CQ17RN3 349 aaKnown RBP23.21■■□□□ 1.31
LINC00461-215ENST00000513893 USP47Q96K76 1375 aa23.21■■□□□ 1.31
LINC00461-215ENST00000513893 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
LINC00461-215ENST00000513893 CD163L1Q9NR16 1453 aa23.2■■□□□ 1.3
LINC00461-215ENST00000513893 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.3
LINC00461-215ENST00000513893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.2■■□□□ 1.3
LINC00461-215ENST00000513893 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
LINC00461-215ENST00000513893 A0A0G2JS52 829 aa23.19■■□□□ 1.3
LINC00461-215ENST00000513893 MYT1Q01538 1121 aa23.19■■□□□ 1.3
LINC00461-215ENST00000513893 CLSPNQ9HAW4 1339 aa23.17■■□□□ 1.3
LINC00461-215ENST00000513893 ZNF692Q9BU19 519 aaPredicted RBP23.17■■□□□ 1.3
LINC00461-215ENST00000513893 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
LINC00461-215ENST00000513893 BRD4O60885 1362 aaPredicted RBP23.16■■□□□ 1.3
LINC00461-215ENST00000513893 SPATA31A5Q5VU36 1347 aa23.16■■□□□ 1.3
LINC00461-215ENST00000513893 SPATA31A7Q8IWB4 1347 aa23.16■■□□□ 1.3
LINC00461-215ENST00000513893 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
LINC00461-215ENST00000513893 CAMTA1Q9Y6Y1 1673 aa23.16■■□□□ 1.3
LINC00461-215ENST00000513893 NME9Q86XW9 330 aa23.15■■□□□ 1.3
LINC00461-215ENST00000513893 SLIT3O75094 1523 aa23.14■■□□□ 1.3
LINC00461-215ENST00000513893 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.29
LINC00461-215ENST00000513893 A0A1W2PP64 1363 aa23.14■■□□□ 1.29
LINC00461-215ENST00000513893 CPDO75976 1380 aa23.14■■□□□ 1.29
LINC00461-215ENST00000513893 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
LINC00461-215ENST00000513893 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
LINC00461-215ENST00000513893 EVA1CP58658 441 aa23.12■■□□□ 1.29
LINC00461-215ENST00000513893 SPATA31A1Q5TZJ5 1347 aa23.11■■□□□ 1.29
LINC00461-215ENST00000513893 BRWD3Q6RI45 1802 aa23.11■■□□□ 1.29
LINC00461-215ENST00000513893 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
LINC00461-215ENST00000513893 TIMELESSQ9UNS1 1208 aa23.11■■□□□ 1.29
LINC00461-215ENST00000513893 TTC21AQ8NDW8 1320 aa23.1■■□□□ 1.29
LINC00461-215ENST00000513893 LMO7Q8WWI1 1683 aa23.1■■□□□ 1.29
LINC00461-215ENST00000513893 MON2Q7Z3U7 1717 aa23.1■■□□□ 1.29
LINC00461-215ENST00000513893 KRT27Q7Z3Y8 459 aa23.09■■□□□ 1.29
LINC00461-215ENST00000513893 AXIN2Q9Y2T1 843 aa23.09■■□□□ 1.29
LINC00461-215ENST00000513893 COL5A2P05997 1499 aaPredicted RBP23.07■■□□□ 1.28
LINC00461-215ENST00000513893 EP400Q96L91 3159 aa23.07■■□□□ 1.28
LINC00461-215ENST00000513893 TMF1P82094 1093 aa23.07■■□□□ 1.28
LINC00461-215ENST00000513893 TERF2IPQ9NYB0 399 aa23.06■■□□□ 1.28
LINC00461-215ENST00000513893 ARHGEF25Q86VW2 580 aa23.05■■□□□ 1.28
LINC00461-215ENST00000513893 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
LINC00461-215ENST00000513893 AATKQ6ZMQ8 1374 aa23.04■■□□□ 1.28
LINC00461-215ENST00000513893 NFAT5O94916 1531 aa23.04■■□□□ 1.28
LINC00461-215ENST00000513893 EDC4Q6P2E9 1401 aaKnown RBP23.04■■□□□ 1.28
LINC00461-215ENST00000513893 THSD7AQ9UPZ6 1657 aa23.03■■□□□ 1.28
LINC00461-215ENST00000513893 USP31Q70CQ4 1352 aa23.02■■□□□ 1.28
LINC00461-215ENST00000513893 KCNH5Q8NCM2 988 aa23.02■■□□□ 1.28
LINC00461-215ENST00000513893 FBLN1P23142 703 aa23.01■■□□□ 1.27
LINC00461-215ENST00000513893 DEFB132Q7Z7B7 95 aa23.01■■□□□ 1.27
LINC00461-215ENST00000513893 COL18A1P39060 1754 aa23.01■■□□□ 1.27
LINC00461-215ENST00000513893 TCP11L2Q8N4U5 519 aa23■■□□□ 1.27
LINC00461-215ENST00000513893 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
LINC00461-215ENST00000513893 TOM1L2Q6ZVM7 507 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms