RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
SFXN1-210ENST00000513725 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
SFXN1-210ENST00000513725 SHANK3Q9BYB0 1731 aa18.39■□□□□ 0.53
SFXN1-210ENST00000513725 CAPN15O75808 1086 aa18.38■□□□□ 0.53
SFXN1-210ENST00000513725 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
SFXN1-210ENST00000513725 WAPLQ7Z5K2 1190 aa18.37■□□□□ 0.53
SFXN1-210ENST00000513725 BCL11BQ9C0K0 894 aaPredicted RBP18.37■□□□□ 0.53
SFXN1-210ENST00000513725 PLSCR1O15162 318 aa18.36■□□□□ 0.53
SFXN1-210ENST00000513725 MTFR1LQ9H019 292 aa18.36■□□□□ 0.53
SFXN1-210ENST00000513725 RGPD3A6NKT7 1758 aaPredicted RBP18.35■□□□□ 0.53
SFXN1-210ENST00000513725 RGPD4Q7Z3J3 1758 aa18.35■□□□□ 0.53
SFXN1-210ENST00000513725 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
SFXN1-210ENST00000513725 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
SFXN1-210ENST00000513725 NRXN1Q9ULB1 1477 aa18.34■□□□□ 0.53
SFXN1-210ENST00000513725 SLC34A2O95436 690 aa18.34■□□□□ 0.53
SFXN1-210ENST00000513725 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
SFXN1-210ENST00000513725 ARXQ96QS3 562 aa18.34■□□□□ 0.53
SFXN1-210ENST00000513725 STRN4Q9NRL3 753 aa18.33■□□□□ 0.52
SFXN1-210ENST00000513725 USP35Q9P2H5 1018 aa18.33■□□□□ 0.52
SFXN1-210ENST00000513725 SGIP1Q9BQI5 828 aa18.32■□□□□ 0.52
SFXN1-210ENST00000513725 STK26Q9P289 416 aa18.32■□□□□ 0.52
SFXN1-210ENST00000513725 KIF1BO60333 1816 aa18.32■□□□□ 0.52
SFXN1-210ENST00000513725 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
SFXN1-210ENST00000513725 STK32BQ9NY57 414 aa18.31■□□□□ 0.52
SFXN1-210ENST00000513725 TECPR2O15040 1411 aa18.31■□□□□ 0.52
SFXN1-210ENST00000513725 RGPD8O14715 1765 aaPredicted RBP18.3■□□□□ 0.52
SFXN1-210ENST00000513725 GOLGB1Q14789 3259 aaKnown RBP18.3■□□□□ 0.52
SFXN1-210ENST00000513725 PRELPP51888 382 aa18.3■□□□□ 0.52
SFXN1-210ENST00000513725 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
SFXN1-210ENST00000513725 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
SFXN1-210ENST00000513725 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
SFXN1-210ENST00000513725 GPBP1L1Q9HC44 474 aaPredicted RBP18.28■□□□□ 0.52
SFXN1-210ENST00000513725 PLEKHH1Q9ULM0 1364 aa18.28■□□□□ 0.52
SFXN1-210ENST00000513725 EVA1CP58658 441 aa18.26■□□□□ 0.51
SFXN1-210ENST00000513725 SLC15A2Q16348 729 aa18.26■□□□□ 0.51
SFXN1-210ENST00000513725 ATP10DQ9P241 1426 aa18.25■□□□□ 0.51
SFXN1-210ENST00000513725 COL13A1Q5TAT6 717 aaPredicted RBP18.25■□□□□ 0.51
SFXN1-210ENST00000513725 TCP11L2Q8N4U5 519 aa18.25■□□□□ 0.51
SFXN1-210ENST00000513725 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
SFXN1-210ENST00000513725 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
SFXN1-210ENST00000513725 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
SFXN1-210ENST00000513725 APLP2Q06481 763 aa18.24■□□□□ 0.51
SFXN1-210ENST00000513725 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 ALS2Q96Q42 1657 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 CHRNA2Q15822 529 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 TNS4Q8IZW8 715 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 PROM2Q8N271 834 aa18.23■□□□□ 0.51
SFXN1-210ENST00000513725 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
SFXN1-210ENST00000513725 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
SFXN1-210ENST00000513725 APLP1P51693 650 aa18.22■□□□□ 0.51
SFXN1-210ENST00000513725 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
SFXN1-210ENST00000513725 KLHL34Q8N239 644 aa18.21■□□□□ 0.51
SFXN1-210ENST00000513725 PCDH10Q9P2E7 1040 aa18.21■□□□□ 0.51
SFXN1-210ENST00000513725 THRAP3Q9Y2W1 955 aaKnown RBP18.21■□□□□ 0.51
SFXN1-210ENST00000513725 SSH2Q76I76 1423 aa18.2■□□□□ 0.5
SFXN1-210ENST00000513725 CRYBG1Q9Y4K1 1723 aa18.2■□□□□ 0.5
SFXN1-210ENST00000513725 ROCK1Q13464 1354 aa18.19■□□□□ 0.5
SFXN1-210ENST00000513725 PPLO60437 1756 aa18.18■□□□□ 0.5
SFXN1-210ENST00000513725 TXNRD1Q16881 649 aa18.18■□□□□ 0.5
SFXN1-210ENST00000513725 SBF2Q86WG5 1849 aa18.18■□□□□ 0.5
SFXN1-210ENST00000513725 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
SFXN1-210ENST00000513725 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
SFXN1-210ENST00000513725 PEAK1Q9H792 1746 aa18.17■□□□□ 0.5
SFXN1-210ENST00000513725 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
SFXN1-210ENST00000513725 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-210ENST00000513725 DNAJC5GQ8N7S2 189 aa18.16■□□□□ 0.5
SFXN1-210ENST00000513725 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
SFXN1-210ENST00000513725 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
SFXN1-210ENST00000513725 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
SFXN1-210ENST00000513725 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
SFXN1-210ENST00000513725 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
SFXN1-210ENST00000513725 PTF1AQ7RTS3 328 aa18.14■□□□□ 0.49
SFXN1-210ENST00000513725 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
SFXN1-210ENST00000513725 POLD1P28340 1107 aa18.13■□□□□ 0.49
SFXN1-210ENST00000513725 YTHDC2Q9H6S0 1430 aaKnown RBP18.12■□□□□ 0.49
SFXN1-210ENST00000513725 ATP7BP35670 1465 aa18.12■□□□□ 0.49
SFXN1-210ENST00000513725 YBX3P16989 372 aaKnown RBP eCLIP18.11■□□□□ 0.498e-9■□□□□ 10.8
SFXN1-210ENST00000513725 ADGRF5Q8IZF2 1346 aa18.11■□□□□ 0.49
SFXN1-210ENST00000513725 DDB1Q16531 1140 aa18.1■□□□□ 0.49
SFXN1-210ENST00000513725 NLGN2Q8NFZ4 835 aa18.09■□□□□ 0.49
SFXN1-210ENST00000513725 PHRF1Q9P1Y6 1649 aaKnown RBP18.08■□□□□ 0.48
SFXN1-210ENST00000513725 ADCY9O60503 1353 aa18.07■□□□□ 0.48
SFXN1-210ENST00000513725 AATKQ6ZMQ8 1374 aa18.07■□□□□ 0.48
SFXN1-210ENST00000513725 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
SFXN1-210ENST00000513725 SLC16A10Q8TF71 515 aa18.06■□□□□ 0.48
SFXN1-210ENST00000513725 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
SFXN1-210ENST00000513725 BCL9O00512 1426 aa18.05■□□□□ 0.48
SFXN1-210ENST00000513725 KIF3CO14782 793 aa18.04■□□□□ 0.48
SFXN1-210ENST00000513725 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
SFXN1-210ENST00000513725 JMYQ8N9B5 988 aa18.03■□□□□ 0.48
SFXN1-210ENST00000513725 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
SFXN1-210ENST00000513725 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
SFXN1-210ENST00000513725 TOPAZ1Q8N9V7 1692 aa18.03■□□□□ 0.48
SFXN1-210ENST00000513725 CRB1P82279 1406 aa18.02■□□□□ 0.48
SFXN1-210ENST00000513725 KLRG1Q96E93 195 aa18.02■□□□□ 0.48
SFXN1-210ENST00000513725 WWC3Q9ULE0 1092 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms