RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 NRXN1Q9ULB1 1477 aa13.59□□□□□ -0.23
CAST-239ENST00000513666 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
CAST-239ENST00000513666 FAM98CQ17RN3 349 aaKnown RBP13.59□□□□□ -0.23
CAST-239ENST00000513666 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
CAST-239ENST00000513666 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
CAST-239ENST00000513666 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.24
CAST-239ENST00000513666 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
CAST-239ENST00000513666 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
CAST-239ENST00000513666 SIRT1Q96EB6 747 aa13.57□□□□□ -0.24
CAST-239ENST00000513666 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
CAST-239ENST00000513666 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
CAST-239ENST00000513666 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
CAST-239ENST00000513666 THSD7AQ9UPZ6 1657 aa13.56□□□□□ -0.24
CAST-239ENST00000513666 BTG4Q9NY30 223 aa13.55□□□□□ -0.24
CAST-239ENST00000513666 FAM182BQ5T319 152 aa13.54□□□□□ -0.24
CAST-239ENST00000513666 ADGRB2O60241 1585 aa13.54□□□□□ -0.24
CAST-239ENST00000513666 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
CAST-239ENST00000513666 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
CAST-239ENST00000513666 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
CAST-239ENST00000513666 SPATA31A5Q5VU36 1347 aa13.53□□□□□ -0.24
CAST-239ENST00000513666 SPATA31A7Q8IWB4 1347 aa13.53□□□□□ -0.24
CAST-239ENST00000513666 YY1P25490 414 aa13.53□□□□□ -0.24
CAST-239ENST00000513666 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
CAST-239ENST00000513666 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CAST-239ENST00000513666 ALS2Q96Q42 1657 aa13.52□□□□□ -0.24
CAST-239ENST00000513666 CAMKK2Q96RR4 588 aa13.52□□□□□ -0.25
CAST-239ENST00000513666 ANKARQ7Z5J8 1434 aa13.52□□□□□ -0.25
CAST-239ENST00000513666 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
CAST-239ENST00000513666 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
CAST-239ENST00000513666 PMFBP1Q8TBY8 1022 aa13.5□□□□□ -0.25
CAST-239ENST00000513666 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
CAST-239ENST00000513666 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
CAST-239ENST00000513666 RREB1Q92766 1687 aa13.49□□□□□ -0.25
CAST-239ENST00000513666 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
CAST-239ENST00000513666 TRIM37O94972 964 aa13.49□□□□□ -0.25
CAST-239ENST00000513666 FAM196AQ6ZSG2 479 aa13.49□□□□□ -0.25
CAST-239ENST00000513666 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
CAST-239ENST00000513666 PRAM1Q96QH2 718 aa13.48□□□□□ -0.25
CAST-239ENST00000513666 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
CAST-239ENST00000513666 DLC1Q96QB1 1528 aa13.47□□□□□ -0.25
CAST-239ENST00000513666 APBA3O96018 575 aa13.47□□□□□ -0.25
CAST-239ENST00000513666 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
CAST-239ENST00000513666 NUP188Q5SRE5 1749 aa13.47□□□□□ -0.25
CAST-239ENST00000513666 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.25
CAST-239ENST00000513666 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
CAST-239ENST00000513666 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
CAST-239ENST00000513666 POGKQ9P215 609 aa13.44□□□□□ -0.26
CAST-239ENST00000513666 TULP4Q9NRJ4 1543 aa13.43□□□□□ -0.26
CAST-239ENST00000513666 EIF3AQ14152 1382 aaKnown RBP13.43□□□□□ -0.26
CAST-239ENST00000513666 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
CAST-239ENST00000513666 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
CAST-239ENST00000513666 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
CAST-239ENST00000513666 KIAA0232Q92628 1395 aa13.42□□□□□ -0.26
CAST-239ENST00000513666 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
CAST-239ENST00000513666 POTEHQ6S545 545 aa13.42□□□□□ -0.26
CAST-239ENST00000513666 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
CAST-239ENST00000513666 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
CAST-239ENST00000513666 STRN4Q9NRL3 753 aa13.41□□□□□ -0.26
CAST-239ENST00000513666 PPP1R1BQ9UD71 204 aaPredicted RBP13.41□□□□□ -0.26
CAST-239ENST00000513666 PHRF1Q9P1Y6 1649 aaKnown RBP13.41□□□□□ -0.26
CAST-239ENST00000513666 KCNQ2O43526 872 aa13.4□□□□□ -0.26
CAST-239ENST00000513666 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
CAST-239ENST00000513666 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
CAST-239ENST00000513666 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
CAST-239ENST00000513666 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
CAST-239ENST00000513666 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
CAST-239ENST00000513666 CHRNA2Q15822 529 aa13.39□□□□□ -0.27
CAST-239ENST00000513666 NGDNQ8NEJ9 315 aaKnown RBP13.39□□□□□ -0.27
CAST-239ENST00000513666 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
CAST-239ENST00000513666 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
CAST-239ENST00000513666 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
CAST-239ENST00000513666 SSH2Q76I76 1423 aa13.38□□□□□ -0.27
CAST-239ENST00000513666 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
CAST-239ENST00000513666 ATP7BP35670 1465 aa13.37□□□□□ -0.27
CAST-239ENST00000513666 ITSN1Q15811 1721 aa13.37□□□□□ -0.27
CAST-239ENST00000513666 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
CAST-239ENST00000513666 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
CAST-239ENST00000513666 RGPD3A6NKT7 1758 aaPredicted RBP13.36□□□□□ -0.27
CAST-239ENST00000513666 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
CAST-239ENST00000513666 EVA1CP58658 441 aa13.35□□□□□ -0.27
CAST-239ENST00000513666 TCP11L2Q8N4U5 519 aa13.35□□□□□ -0.27
CAST-239ENST00000513666 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
CAST-239ENST00000513666 LMO7Q8WWI1 1683 aa13.34□□□□□ -0.27
CAST-239ENST00000513666 CASZ1Q86V15 1759 aa13.34□□□□□ -0.27
CAST-239ENST00000513666 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
CAST-239ENST00000513666 LARP1Q6PKG0 1096 aaKnown RBP13.34□□□□□ -0.27
CAST-239ENST00000513666 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.27
CAST-239ENST00000513666 THRAP3Q9Y2W1 955 aaKnown RBP13.33□□□□□ -0.28
CAST-239ENST00000513666 CPDO75976 1380 aa13.32□□□□□ -0.28
CAST-239ENST00000513666 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
CAST-239ENST00000513666 PEAK1Q9H792 1746 aa13.32□□□□□ -0.28
CAST-239ENST00000513666 ZNF784Q8NCA9 323 aaPredicted RBP13.31□□□□□ -0.28
CAST-239ENST00000513666 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
CAST-239ENST00000513666 SBF2Q86WG5 1849 aa13.31□□□□□ -0.28
CAST-239ENST00000513666 PLSCR1O15162 318 aa13.3□□□□□ -0.28
CAST-239ENST00000513666 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
CAST-239ENST00000513666 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
CAST-239ENST00000513666 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
CAST-239ENST00000513666 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
CAST-239ENST00000513666 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms