RNA–Protein interactions for RNA: ENST00000513597.5

RUFY3-212, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-212ENST00000513597 STAC3Q96MF2 364 aa11.39□□□□□ -0.59
RUFY3-212ENST00000513597 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
RUFY3-212ENST00000513597 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
RUFY3-212ENST00000513597 ATG7O95352 703 aa11.37□□□□□ -0.59
RUFY3-212ENST00000513597 TBC1D9Q6ZT07 1266 aa11.37□□□□□ -0.59
RUFY3-212ENST00000513597 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
RUFY3-212ENST00000513597 FAM160A2Q8N612 972 aaPredicted RBP11.37□□□□□ -0.59
RUFY3-212ENST00000513597 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
RUFY3-212ENST00000513597 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
RUFY3-212ENST00000513597 ATP9BO43861 1147 aa11.36□□□□□ -0.59
RUFY3-212ENST00000513597 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
RUFY3-212ENST00000513597 MMP16P51512 607 aa11.36□□□□□ -0.59
RUFY3-212ENST00000513597 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
RUFY3-212ENST00000513597 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
RUFY3-212ENST00000513597 GPSM3Q9Y4H4 160 aa11.36□□□□□ -0.59
RUFY3-212ENST00000513597 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
RUFY3-212ENST00000513597 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
RUFY3-212ENST00000513597 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.59
RUFY3-212ENST00000513597 BRD1O95696 1058 aa11.33□□□□□ -0.6
RUFY3-212ENST00000513597 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
RUFY3-212ENST00000513597 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
RUFY3-212ENST00000513597 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
RUFY3-212ENST00000513597 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
RUFY3-212ENST00000513597 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
RUFY3-212ENST00000513597 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
RUFY3-212ENST00000513597 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
RUFY3-212ENST00000513597 SPSB2Q99619 263 aa11.32□□□□□ -0.6
RUFY3-212ENST00000513597 TMEM88BA6NKF7 163 aa11.3□□□□□ -0.6
RUFY3-212ENST00000513597 MCCD1P59942 119 aaPredicted RBP11.3□□□□□ -0.6
RUFY3-212ENST00000513597 ELOAQ14241 798 aaKnown RBP11.3□□□□□ -0.6
RUFY3-212ENST00000513597 OCSTAMPQ9BR26 566 aa11.3□□□□□ -0.6
RUFY3-212ENST00000513597 KCNA1Q09470 495 aa11.29□□□□□ -0.6
RUFY3-212ENST00000513597 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
RUFY3-212ENST00000513597 NYAP1Q6ZVC0 841 aa11.29□□□□□ -0.6
RUFY3-212ENST00000513597 PLEKHM2Q8IWE5 1019 aa11.29□□□□□ -0.6
RUFY3-212ENST00000513597 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
RUFY3-212ENST00000513597 CTHP32929 405 aa11.28□□□□□ -0.6
RUFY3-212ENST00000513597 ZNF592Q92610 1267 aa11.28□□□□□ -0.6
RUFY3-212ENST00000513597 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
RUFY3-212ENST00000513597 PTK2Q05397 1052 aa11.27□□□□□ -0.61
RUFY3-212ENST00000513597 PHTF2Q8N3S3 785 aa11.27□□□□□ -0.61
RUFY3-212ENST00000513597 VRTNQ9H8Y1 702 aa11.27□□□□□ -0.61
RUFY3-212ENST00000513597 CEP126Q9P2H0 1117 aa11.27□□□□□ -0.61
RUFY3-212ENST00000513597 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
RUFY3-212ENST00000513597 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
RUFY3-212ENST00000513597 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
RUFY3-212ENST00000513597 ZPR1O75312 459 aa11.25□□□□□ -0.61
RUFY3-212ENST00000513597 CDCA8Q53HL2 280 aa11.25□□□□□ -0.61
RUFY3-212ENST00000513597 ADH1BP00325 375 aa11.24□□□□□ -0.61
RUFY3-212ENST00000513597 FAM174AQ8TBP5 190 aa11.24□□□□□ -0.61
RUFY3-212ENST00000513597 GZF1Q9H116 711 aaPredicted RBP11.24□□□□□ -0.61
RUFY3-212ENST00000513597 PRDM9Q9NQV7 894 aa11.24□□□□□ -0.61
RUFY3-212ENST00000513597 USP17L3A6NCW0 530 aa11.23□□□□□ -0.61
RUFY3-212ENST00000513597 USP17L4A6NCW7 530 aa11.23□□□□□ -0.61
RUFY3-212ENST00000513597 COPS2P61201 443 aa11.23□□□□□ -0.61
RUFY3-212ENST00000513597 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
RUFY3-212ENST00000513597 USP17L2Q6R6M4 530 aa11.23□□□□□ -0.61
RUFY3-212ENST00000513597 USP17L1Q7RTZ2 530 aa11.23□□□□□ -0.61
RUFY3-212ENST00000513597 CARNS1A5YM72 827 aa11.22□□□□□ -0.61
RUFY3-212ENST00000513597 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
RUFY3-212ENST00000513597 MYT1LQ9UL68 1186 aa11.22□□□□□ -0.61
RUFY3-212ENST00000513597 USP17L5A8MUK1 530 aa11.21□□□□□ -0.61
RUFY3-212ENST00000513597 SKIP12755 728 aa11.21□□□□□ -0.61
RUFY3-212ENST00000513597 SH3BP5LQ7L8J4 393 aa11.21□□□□□ -0.61
RUFY3-212ENST00000513597 PTCRAQ6ISU1 281 aaPredicted RBP11.2□□□□□ -0.62
RUFY3-212ENST00000513597 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
RUFY3-212ENST00000513597 ZMIZ1Q9ULJ6 1067 aa11.2□□□□□ -0.62
RUFY3-212ENST00000513597 POTEMA6NI47 508 aa11.19□□□□□ -0.62
RUFY3-212ENST00000513597 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
RUFY3-212ENST00000513597 TJAP1Q5JTD0 557 aa11.19□□□□□ -0.62
RUFY3-212ENST00000513597 MTRQ99707 1265 aa11.19□□□□□ -0.62
RUFY3-212ENST00000513597 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
RUFY3-212ENST00000513597 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
RUFY3-212ENST00000513597 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
RUFY3-212ENST00000513597 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
RUFY3-212ENST00000513597 TLL1O43897 1013 aa11.17□□□□□ -0.62
RUFY3-212ENST00000513597 MAP7D1Q3KQU3 841 aa11.17□□□□□ -0.62
RUFY3-212ENST00000513597 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
RUFY3-212ENST00000513597 RGS22Q8NE09 1264 aa11.17□□□□□ -0.62
RUFY3-212ENST00000513597 ARHGAP9Q9BRR9 750 aa11.17□□□□□ -0.62
RUFY3-212ENST00000513597 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
RUFY3-212ENST00000513597 KCTD12Q96CX2 325 aaKnown RBP11.16□□□□□ -0.62
RUFY3-212ENST00000513597 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
RUFY3-212ENST00000513597 MKRN1Q9UHC7 482 aaKnown RBP11.16□□□□□ -0.62
RUFY3-212ENST00000513597 TMEM164Q5U3C3 297 aa11.15□□□□□ -0.62
RUFY3-212ENST00000513597 SLC6A16Q9GZN6 736 aa11.15□□□□□ -0.62
RUFY3-212ENST00000513597 GNEQ9Y223 722 aaKnown RBP11.15□□□□□ -0.62
RUFY3-212ENST00000513597 PCDHB9Q9Y5E1 797 aa11.15□□□□□ -0.62
RUFY3-212ENST00000513597 ATP5J2-PTCD1G3V325 749 aa11.14□□□□□ -0.63
RUFY3-212ENST00000513597 PTK7Q13308 1070 aa11.14□□□□□ -0.63
RUFY3-212ENST00000513597 RNF135Q8IUD6 432 aa11.14□□□□□ -0.63
RUFY3-212ENST00000513597 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
RUFY3-212ENST00000513597 NOVA2Q9UNW9 492 aaKnown RBP11.14□□□□□ -0.63
RUFY3-212ENST00000513597 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
RUFY3-212ENST00000513597 NCOA4Q13772 614 aa11.13□□□□□ -0.63
RUFY3-212ENST00000513597 DEPDC4Q8N2C3 294 aa11.13□□□□□ -0.63
RUFY3-212ENST00000513597 STK32AQ8WU08 396 aa11.13□□□□□ -0.63
RUFY3-212ENST00000513597 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
RUFY3-212ENST00000513597 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms