RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 TREML4Q6UXN2 200 aa10.52□□□□□ -0.73
SNX25-206ENST00000513433 CABLES1Q8TDN4 633 aa10.52□□□□□ -0.73
SNX25-206ENST00000513433 C11orf95C9JLR9 678 aaPredicted RBP10.51□□□□□ -0.73
SNX25-206ENST00000513433 TRIM47Q96LD4 638 aa10.51□□□□□ -0.73
SNX25-206ENST00000513433 SENP2Q9HC62 589 aa10.5□□□□□ -0.73
SNX25-206ENST00000513433 QPCTQ16769 361 aa10.49□□□□□ -0.73
SNX25-206ENST00000513433 RSPH6AQ9H0K4 717 aa10.49□□□□□ -0.73
SNX25-206ENST00000513433 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
SNX25-206ENST00000513433 KIFC2Q96AC6 838 aa10.48□□□□□ -0.73
SNX25-206ENST00000513433 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
SNX25-206ENST00000513433 PER1O15534 1290 aaPredicted RBP10.47□□□□□ -0.73
SNX25-206ENST00000513433 CDK15Q96Q40 435 aa10.47□□□□□ -0.73
SNX25-206ENST00000513433 CTHP32929 405 aa10.46□□□□□ -0.73
SNX25-206ENST00000513433 CLK2P49760 499 aaKnown RBP10.46□□□□□ -0.73
SNX25-206ENST00000513433 MAP10Q9P2G4 905 aa10.46□□□□□ -0.73
SNX25-206ENST00000513433 WASF2Q9Y6W5 498 aa10.46□□□□□ -0.73
SNX25-206ENST00000513433 SNRPBP14678 240 aaKnown RBP10.45□□□□□ -0.74
SNX25-206ENST00000513433 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
SNX25-206ENST00000513433 CSPP1Q1MSJ5 1256 aa10.44□□□□□ -0.74
SNX25-206ENST00000513433 RTL5Q5HYW3 569 aaPredicted RBP10.44□□□□□ -0.74
SNX25-206ENST00000513433 TLL2Q9Y6L7 1015 aa10.44□□□□□ -0.74
SNX25-206ENST00000513433 FAM174AQ8TBP5 190 aa10.43□□□□□ -0.74
SNX25-206ENST00000513433 KLF16Q9BXK1 252 aaPredicted RBP10.43□□□□□ -0.74
SNX25-206ENST00000513433 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
SNX25-206ENST00000513433 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
SNX25-206ENST00000513433 CAPN5O15484 640 aaPredicted RBP10.42□□□□□ -0.74
SNX25-206ENST00000513433 NUTM2DQ5VT03 806 aaPredicted RBP10.42□□□□□ -0.74
SNX25-206ENST00000513433 TRIM46Q7Z4K8 759 aa10.42□□□□□ -0.74
SNX25-206ENST00000513433 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
SNX25-206ENST00000513433 ARMC2Q8NEN0 867 aa10.42□□□□□ -0.74
SNX25-206ENST00000513433 FOXJ1Q92949 421 aa10.42□□□□□ -0.74
SNX25-206ENST00000513433 BCANQ96GW7 911 aa10.42□□□□□ -0.74
SNX25-206ENST00000513433 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
SNX25-206ENST00000513433 SH3RF1Q7Z6J0 888 aa10.41□□□□□ -0.74
SNX25-206ENST00000513433 C1QTNF2Q9BXJ5 285 aa10.41□□□□□ -0.74
SNX25-206ENST00000513433 WFS1O76024 890 aa10.4□□□□□ -0.74
SNX25-206ENST00000513433 ADH1CP00326 375 aa10.4□□□□□ -0.74
SNX25-206ENST00000513433 SKIV2LQ15477 1246 aaKnown RBP10.4□□□□□ -0.74
SNX25-206ENST00000513433 HELBQ8NG08 1087 aaPredicted RBP10.4□□□□□ -0.74
SNX25-206ENST00000513433 NNTQ13423 1086 aa10.39□□□□□ -0.75
SNX25-206ENST00000513433 SH3D19Q5HYK7 790 aa10.39□□□□□ -0.75
SNX25-206ENST00000513433 BPHLQ86WA6 291 aaPredicted RBP10.39□□□□□ -0.75
SNX25-206ENST00000513433 PPP2R2DQ66LE6 453 aa10.38□□□□□ -0.75
SNX25-206ENST00000513433 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.38□□□□□ -0.75
SNX25-206ENST00000513433 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
SNX25-206ENST00000513433 TERTO14746 1132 aaKnown RBP10.37□□□□□ -0.75
SNX25-206ENST00000513433 WIPF1O43516 503 aa10.37□□□□□ -0.75
SNX25-206ENST00000513433 TIMP2P16035 220 aa10.37□□□□□ -0.75
SNX25-206ENST00000513433 NR5A1Q13285 461 aa10.37□□□□□ -0.75
SNX25-206ENST00000513433 SH3BP5LQ7L8J4 393 aa10.37□□□□□ -0.75
SNX25-206ENST00000513433 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
SNX25-206ENST00000513433 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
SNX25-206ENST00000513433 POLR3EQ9NVU0 708 aa10.37□□□□□ -0.75
SNX25-206ENST00000513433 GRM5P41594 1212 aa10.36□□□□□ -0.75
SNX25-206ENST00000513433 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
SNX25-206ENST00000513433 DDRGK1Q96HY6 314 aa10.36□□□□□ -0.75
SNX25-206ENST00000513433 MAP4K5Q9Y4K4 846 aa10.36□□□□□ -0.75
SNX25-206ENST00000513433 BMP1P13497 986 aa10.34□□□□□ -0.75
SNX25-206ENST00000513433 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
SNX25-206ENST00000513433 FBXO31Q5XUX0 539 aaPredicted RBP10.34□□□□□ -0.75
SNX25-206ENST00000513433 FAM117AQ9C073 453 aa10.34□□□□□ -0.75
SNX25-206ENST00000513433 CTDSPL2Q05D32 466 aa10.33□□□□□ -0.76
SNX25-206ENST00000513433 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
SNX25-206ENST00000513433 TSC1Q92574 1164 aa10.33□□□□□ -0.76
SNX25-206ENST00000513433 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
SNX25-206ENST00000513433 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
SNX25-206ENST00000513433 NR3C2P08235 984 aa10.31□□□□□ -0.76
SNX25-206ENST00000513433 MRPL14Q6P1L8 145 aaKnown RBP10.31□□□□□ -0.76
SNX25-206ENST00000513433 PDXDC2PQ6P474 469 aa10.3□□□□□ -0.76
SNX25-206ENST00000513433 ZFP42Q96MM3 310 aa10.3□□□□□ -0.76
SNX25-206ENST00000513433 ZC3H4Q9UPT8 1303 aaKnown RBP10.3□□□□□ -0.76
SNX25-206ENST00000513433 SLC24A1O60721 1099 aa10.29□□□□□ -0.76
SNX25-206ENST00000513433 AGERQ15109 404 aa10.29□□□□□ -0.76
SNX25-206ENST00000513433 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
SNX25-206ENST00000513433 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
SNX25-206ENST00000513433 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
SNX25-206ENST00000513433 ITPKCQ96DU7 683 aa10.27□□□□□ -0.77
SNX25-206ENST00000513433 ZIC2O95409 532 aaPredicted RBP10.26□□□□□ -0.77
SNX25-206ENST00000513433 SCARF1Q14162 830 aa10.26□□□□□ -0.77
SNX25-206ENST00000513433 ARID5BQ14865 1188 aa10.26□□□□□ -0.77
SNX25-206ENST00000513433 ERFEQ4G0M1 354 aa10.26□□□□□ -0.77
SNX25-206ENST00000513433 LRRN4Q8WUT4 740 aa10.26□□□□□ -0.77
SNX25-206ENST00000513433 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
SNX25-206ENST00000513433 FKBPLQ9UIM3 349 aa10.26□□□□□ -0.77
SNX25-206ENST00000513433 GPSM3Q9Y4H4 160 aa10.24□□□□□ -0.77
SNX25-206ENST00000513433 H3BM21 787 aa10.23□□□□□ -0.77
SNX25-206ENST00000513433 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
SNX25-206ENST00000513433 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
SNX25-206ENST00000513433 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
SNX25-206ENST00000513433 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
SNX25-206ENST00000513433 OCSTAMPQ9BR26 566 aa10.22□□□□□ -0.77
SNX25-206ENST00000513433 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
SNX25-206ENST00000513433 EMILIN1Q9Y6C2 1016 aa10.22□□□□□ -0.77
SNX25-206ENST00000513433 FSHRP23945 695 aa10.21□□□□□ -0.77
SNX25-206ENST00000513433 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.77
SNX25-206ENST00000513433 NR6A1Q15406 480 aa10.21□□□□□ -0.77
SNX25-206ENST00000513433 MAGEB6P1A0A0J9YX57 407 aa10.2□□□□□ -0.78
SNX25-206ENST00000513433 CCDC116Q8IYX3 515 aa10.2□□□□□ -0.78
SNX25-206ENST00000513433 ARHGAP9Q9BRR9 750 aa10.2□□□□□ -0.78
SNX25-206ENST00000513433 STK17AQ9UEE5 414 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms