RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
PTPN20-228ENST00000513266 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
PTPN20-228ENST00000513266 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
PTPN20-228ENST00000513266 SYT17Q9BSW7 474 aa14.89□□□□□ -0.03
PTPN20-228ENST00000513266 SHANK3Q9BYB0 1731 aa14.89□□□□□ -0.03
PTPN20-228ENST00000513266 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
PTPN20-228ENST00000513266 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
PTPN20-228ENST00000513266 SBF2Q86WG5 1849 aa14.88□□□□□ -0.03
PTPN20-228ENST00000513266 FHDC1Q9C0D6 1143 aaPredicted RBP14.88□□□□□ -0.03
PTPN20-228ENST00000513266 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
PTPN20-228ENST00000513266 TECPR2O15040 1411 aa14.88□□□□□ -0.03
PTPN20-228ENST00000513266 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
PTPN20-228ENST00000513266 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
PTPN20-228ENST00000513266 DLC1Q96QB1 1528 aa14.87□□□□□ -0.03
PTPN20-228ENST00000513266 ZBTB7AO95365 584 aa14.86□□□□□ -0.03
PTPN20-228ENST00000513266 FAM50AQ14320 339 aaKnown RBP14.86□□□□□ -0.03
PTPN20-228ENST00000513266 STK26Q9P289 416 aa14.83□□□□□ -0.04
PTPN20-228ENST00000513266 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
PTPN20-228ENST00000513266 PEAK1Q9H792 1746 aa14.82□□□□□ -0.04
PTPN20-228ENST00000513266 ROCK1Q13464 1354 aa14.82□□□□□ -0.04
PTPN20-228ENST00000513266 PDE3BQ13370 1112 aa14.81□□□□□ -0.04
PTPN20-228ENST00000513266 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
PTPN20-228ENST00000513266 SGIP1Q9BQI5 828 aa14.79□□□□□ -0.04
PTPN20-228ENST00000513266 PRDM11Q9NQV5 511 aa14.79□□□□□ -0.04
PTPN20-228ENST00000513266 PARP4Q9UKK3 1724 aaKnown RBP14.79□□□□□ -0.04
PTPN20-228ENST00000513266 RPGRIP1LQ68CZ1 1315 aa14.78□□□□□ -0.04
PTPN20-228ENST00000513266 BARGINQ6ZT62 677 aa14.78□□□□□ -0.04
PTPN20-228ENST00000513266 GOLGB1Q14789 3259 aaKnown RBP14.77□□□□□ -0.04
PTPN20-228ENST00000513266 STRN4Q9NRL3 753 aa14.77□□□□□ -0.05
PTPN20-228ENST00000513266 USP35Q9P2H5 1018 aa14.77□□□□□ -0.05
PTPN20-228ENST00000513266 PHRF1Q9P1Y6 1649 aaKnown RBP14.77□□□□□ -0.05
PTPN20-228ENST00000513266 PLSCR1O15162 318 aa14.76□□□□□ -0.05
PTPN20-228ENST00000513266 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
PTPN20-228ENST00000513266 MAP3K5Q99683 1374 aa14.75□□□□□ -0.05
PTPN20-228ENST00000513266 KIAA0232Q92628 1395 aa14.74□□□□□ -0.05
PTPN20-228ENST00000513266 CHRNA2Q15822 529 aa14.74□□□□□ -0.05
PTPN20-228ENST00000513266 TMEM132EQ6IEE7 984 aa14.74□□□□□ -0.05
PTPN20-228ENST00000513266 PROM2Q8N271 834 aa14.74□□□□□ -0.05
PTPN20-228ENST00000513266 ADGRF5Q8IZF2 1346 aa14.73□□□□□ -0.05
PTPN20-228ENST00000513266 HSPA6P17066 643 aa14.73□□□□□ -0.05
PTPN20-228ENST00000513266 APLP2Q06481 763 aa14.73□□□□□ -0.05
PTPN20-228ENST00000513266 GPR162Q16538 588 aa14.73□□□□□ -0.05
PTPN20-228ENST00000513266 BCL11BQ9C0K0 894 aaPredicted RBP14.73□□□□□ -0.05
PTPN20-228ENST00000513266 MTFR1LQ9H019 292 aa14.73□□□□□ -0.05
PTPN20-228ENST00000513266 SSH2Q76I76 1423 aa14.73□□□□□ -0.05
PTPN20-228ENST00000513266 PTF1AQ7RTS3 328 aa14.72□□□□□ -0.05
PTPN20-228ENST00000513266 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
PTPN20-228ENST00000513266 ARXQ96QS3 562 aa14.71□□□□□ -0.05
PTPN20-228ENST00000513266 OVOS2A0A0G2JMS6 1433 aa14.7□□□□□ -0.06
PTPN20-228ENST00000513266 OVOS2A0A0J9YW53 1432 aa14.7□□□□□ -0.06
PTPN20-228ENST00000513266 OVOS2Q6IE36 1432 aa14.7□□□□□ -0.06
PTPN20-228ENST00000513266 ANKARQ7Z5J8 1434 aa14.7□□□□□ -0.06
PTPN20-228ENST00000513266 LMO7Q8WWI1 1683 aa14.7□□□□□ -0.06
PTPN20-228ENST00000513266 LRRC37A3O60309 1634 aa14.7□□□□□ -0.06
PTPN20-228ENST00000513266 TCP11L2Q8N4U5 519 aa14.69□□□□□ -0.06
PTPN20-228ENST00000513266 GPRASP1Q5JY77 1395 aa14.69□□□□□ -0.06
PTPN20-228ENST00000513266 ACIN1Q9UKV3 1341 aaKnown RBP14.68□□□□□ -0.06
PTPN20-228ENST00000513266 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
PTPN20-228ENST00000513266 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
PTPN20-228ENST00000513266 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
PTPN20-228ENST00000513266 SIRT1Q96EB6 747 aa14.68□□□□□ -0.06
PTPN20-228ENST00000513266 ATP7BP35670 1465 aa14.68□□□□□ -0.06
PTPN20-228ENST00000513266 AKAP12Q02952 1782 aa14.68□□□□□ -0.06
PTPN20-228ENST00000513266 STK32BQ9NY57 414 aa14.67□□□□□ -0.06
PTPN20-228ENST00000513266 ATP10DQ9P241 1426 aa14.66□□□□□ -0.06
PTPN20-228ENST00000513266 COL24A1Q17RW2 1714 aa14.66□□□□□ -0.06
PTPN20-228ENST00000513266 EVA1CP58658 441 aa14.66□□□□□ -0.06
PTPN20-228ENST00000513266 ZC3H6P61129 1189 aaKnown RBP14.66□□□□□ -0.06
PTPN20-228ENST00000513266 WNK3Q9BYP7 1800 aa14.66□□□□□ -0.06
PTPN20-228ENST00000513266 CAPN15O75808 1086 aa14.65□□□□□ -0.06
PTPN20-228ENST00000513266 PIK3C2GO75747 1445 aa14.65□□□□□ -0.06
PTPN20-228ENST00000513266 SAFB2Q14151 953 aaKnown RBP eCLIP14.64□□□□□ -0.07
PTPN20-228ENST00000513266 TXNRD1Q16881 649 aa14.64□□□□□ -0.07
PTPN20-228ENST00000513266 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
PTPN20-228ENST00000513266 PAPPAQ13219 1627 aa14.63□□□□□ -0.07
PTPN20-228ENST00000513266 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
PTPN20-228ENST00000513266 TOPAZ1Q8N9V7 1692 aa14.63□□□□□ -0.07
PTPN20-228ENST00000513266 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
PTPN20-228ENST00000513266 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
PTPN20-228ENST00000513266 PRR36Q9H6K5 1346 aa14.63□□□□□ -0.07
PTPN20-228ENST00000513266 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
PTPN20-228ENST00000513266 COL13A1Q5TAT6 717 aaPredicted RBP14.61□□□□□ -0.07
PTPN20-228ENST00000513266 PRAM1Q96QH2 718 aa14.61□□□□□ -0.07
PTPN20-228ENST00000513266 SLC34A2O95436 690 aa14.6□□□□□ -0.07
PTPN20-228ENST00000513266 YBX3P16989 372 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTPN20-228ENST00000513266 GPBP1L1Q9HC44 474 aaPredicted RBP14.6□□□□□ -0.07
PTPN20-228ENST00000513266 ITSN1Q15811 1721 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 QSER1Q2KHR3 1735 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 ITGAEP38570 1179 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 NLGN2Q8NFZ4 835 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 TULP4Q9NRJ4 1543 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 AATKQ6ZMQ8 1374 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 ANKRD30BQ9BXX2 1392 aa14.59□□□□□ -0.07
PTPN20-228ENST00000513266 BCL9O00512 1426 aa14.58□□□□□ -0.07
PTPN20-228ENST00000513266 COL5A2P05997 1499 aaPredicted RBP14.58□□□□□ -0.08
PTPN20-228ENST00000513266 DNAJC5GQ8N7S2 189 aa14.58□□□□□ -0.08
PTPN20-228ENST00000513266 SPATA31E1Q6ZUB1 1445 aa14.58□□□□□ -0.08
PTPN20-228ENST00000513266 PRELPP51888 382 aa14.57□□□□□ -0.08
PTPN20-228ENST00000513266 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms