RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
SNX25-205ENST00000512853 NCOA3Q9Y6Q9 1424 aa14.65□□□□□ -0.06
SNX25-205ENST00000512853 TSR2Q969E8 191 aaKnown RBP14.64□□□□□ -0.07
SNX25-205ENST00000512853 C22orf23Q9BZE7 217 aa14.64□□□□□ -0.07
SNX25-205ENST00000512853 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
SNX25-205ENST00000512853 PTPRMP28827 1452 aa14.64□□□□□ -0.07
SNX25-205ENST00000512853 VGFO15240 615 aaPredicted RBP14.64□□□□□ -0.07
SNX25-205ENST00000512853 ATF7IPQ6VMQ6 1270 aa14.64□□□□□ -0.07
SNX25-205ENST00000512853 SSH1Q8WYL5 1049 aa14.64□□□□□ -0.07
SNX25-205ENST00000512853 CD163L1Q9NR16 1453 aa14.63□□□□□ -0.07
SNX25-205ENST00000512853 DIP2CQ9Y2E4 1556 aa14.63□□□□□ -0.07
SNX25-205ENST00000512853 FSD2A1L4K1 749 aa14.63□□□□□ -0.07
SNX25-205ENST00000512853 MCM4P33991 863 aa14.63□□□□□ -0.07
SNX25-205ENST00000512853 CHMP5Q9NZZ3 219 aa14.63□□□□□ -0.07
SNX25-205ENST00000512853 ATAD2Q6PL18 1390 aa14.63□□□□□ -0.07
SNX25-205ENST00000512853 PRKCSHP14314 528 aaPredicted RBP14.62□□□□□ -0.07
SNX25-205ENST00000512853 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
SNX25-205ENST00000512853 KIF16BQ96L93 1317 aa14.62□□□□□ -0.07
SNX25-205ENST00000512853 CABP2Q9NPB3 220 aa14.62□□□□□ -0.07
SNX25-205ENST00000512853 PNPLA6Q8IY17 1366 aa14.61□□□□□ -0.07
SNX25-205ENST00000512853 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
SNX25-205ENST00000512853 MFAP1P55081 439 aaKnown RBP14.6□□□□□ -0.07
SNX25-205ENST00000512853 GGT6Q6P531 493 aa14.6□□□□□ -0.07
SNX25-205ENST00000512853 ITPRIPQ8IWB1 547 aa14.6□□□□□ -0.07
SNX25-205ENST00000512853 ZBTB40Q9NUA8 1239 aa14.6□□□□□ -0.07
SNX25-205ENST00000512853 PPIP5K1Q6PFW1 1433 aa14.6□□□□□ -0.07
SNX25-205ENST00000512853 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
SNX25-205ENST00000512853 RSPH6AQ9H0K4 717 aa14.6□□□□□ -0.07
SNX25-205ENST00000512853 TMEM131LA2VDJ0 1609 aa14.6□□□□□ -0.07
SNX25-205ENST00000512853 REREQ9P2R6 1566 aa14.59□□□□□ -0.07
SNX25-205ENST00000512853 NOB1Q9ULX3 412 aaKnown RBP14.59□□□□□ -0.07
SNX25-205ENST00000512853 PREX1Q8TCU6 1659 aa14.59□□□□□ -0.07
SNX25-205ENST00000512853 NEO1Q92859 1461 aa14.59□□□□□ -0.07
SNX25-205ENST00000512853 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.07
SNX25-205ENST00000512853 RBM25P49756 843 aaKnown RBP14.58□□□□□ -0.07
SNX25-205ENST00000512853 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.07
SNX25-205ENST00000512853 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.07
SNX25-205ENST00000512853 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
SNX25-205ENST00000512853 DDIT3P35638 169 aa14.58□□□□□ -0.08
SNX25-205ENST00000512853 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
SNX25-205ENST00000512853 NUCB1Q02818 461 aa14.58□□□□□ -0.08
SNX25-205ENST00000512853 HSCBQ8IWL3 235 aa14.58□□□□□ -0.08
SNX25-205ENST00000512853 FAM135BQ49AJ0 1406 aa14.57□□□□□ -0.08
SNX25-205ENST00000512853 GOLGA6L3A6NEY3 463 aa14.57□□□□□ -0.08
SNX25-205ENST00000512853 SNX21Q969T3 373 aa14.57□□□□□ -0.08
SNX25-205ENST00000512853 PNNQ9H307 717 aaKnown RBP14.57□□□□□ -0.08
SNX25-205ENST00000512853 GGNBP2Q9H3C7 697 aa14.57□□□□□ -0.08
SNX25-205ENST00000512853 PIK3R4Q99570 1358 aa14.57□□□□□ -0.08
SNX25-205ENST00000512853 RRAGDQ9NQL2 400 aaPredicted RBP14.56□□□□□ -0.08
SNX25-205ENST00000512853 TERF2IPQ9NYB0 399 aa14.56□□□□□ -0.08
SNX25-205ENST00000512853 RICTORQ6R327 1708 aa14.56□□□□□ -0.08
SNX25-205ENST00000512853 FYB1O15117 783 aa14.56□□□□□ -0.08
SNX25-205ENST00000512853 ZNF428Q96B54 188 aa14.56□□□□□ -0.08
SNX25-205ENST00000512853 PTCH1Q13635 1447 aa14.55□□□□□ -0.08
SNX25-205ENST00000512853 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
SNX25-205ENST00000512853 XRCC6P12956 609 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNX25-205ENST00000512853 RIPK4P57078 832 aa14.55□□□□□ -0.08
SNX25-205ENST00000512853 YTHDC2Q9H6S0 1430 aaKnown RBP14.55□□□□□ -0.08
SNX25-205ENST00000512853 ARHGEF40Q8TER5 1519 aa14.55□□□□□ -0.08
SNX25-205ENST00000512853 DIAPH1O60610 1272 aaKnown RBP14.54□□□□□ -0.08
SNX25-205ENST00000512853 TRAK2O60296 914 aa14.54□□□□□ -0.08
SNX25-205ENST00000512853 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
SNX25-205ENST00000512853 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
SNX25-205ENST00000512853 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
SNX25-205ENST00000512853 SPRYD3Q8NCJ5 442 aa14.53□□□□□ -0.08
SNX25-205ENST00000512853 SLC52A1Q9NWF4 448 aa14.53□□□□□ -0.08
SNX25-205ENST00000512853 ISY1Q9ULR0 285 aaKnown RBP14.53□□□□□ -0.08
SNX25-205ENST00000512853 BMP2KLQ5H9B9 411 aa14.53□□□□□ -0.08
SNX25-205ENST00000512853 CHD1LQ86WJ1 897 aa14.53□□□□□ -0.08
SNX25-205ENST00000512853 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
SNX25-205ENST00000512853 ALKQ9UM73 1620 aa14.52□□□□□ -0.09
SNX25-205ENST00000512853 ATP7BP35670 1465 aa14.52□□□□□ -0.09
SNX25-205ENST00000512853 FCHSD2O94868 740 aa14.52□□□□□ -0.09
SNX25-205ENST00000512853 IDI1Q13907 227 aa14.52□□□□□ -0.09
SNX25-205ENST00000512853 SAFB2Q14151 953 aaKnown RBP eCLIP14.51□□□□□ -0.09
SNX25-205ENST00000512853 MRE11P49959 708 aa14.51□□□□□ -0.09
SNX25-205ENST00000512853 HDGFL2Q7Z4V5 671 aaPredicted RBP14.51□□□□□ -0.09
SNX25-205ENST00000512853 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
SNX25-205ENST00000512853 ARHGAP45Q92619 1136 aa14.5□□□□□ -0.09
SNX25-205ENST00000512853 LNPKQ9C0E8 428 aa14.5□□□□□ -0.09
SNX25-205ENST00000512853 MINK1Q8N4C8 1332 aaPredicted RBP14.49□□□□□ -0.09
SNX25-205ENST00000512853 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
SNX25-205ENST00000512853 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
SNX25-205ENST00000512853 STK26Q9P289 416 aa14.49□□□□□ -0.09
SNX25-205ENST00000512853 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
SNX25-205ENST00000512853 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNX25-205ENST00000512853 MRPL50Q8N5N7 158 aaKnown RBP14.49□□□□□ -0.09
SNX25-205ENST00000512853 MAP2P11137 1827 aaKnown RBP14.48□□□□□ -0.09
SNX25-205ENST00000512853 PANK2Q9BZ23 570 aa14.48□□□□□ -0.09
SNX25-205ENST00000512853 GZF1Q9H116 711 aaPredicted RBP14.48□□□□□ -0.09
SNX25-205ENST00000512853 ABCC4O15439 1325 aa14.47□□□□□ -0.09
SNX25-205ENST00000512853 CDK12Q9NYV4 1490 aaPredicted RBP14.47□□□□□ -0.09
SNX25-205ENST00000512853 ZBTB7BO15156 539 aaPredicted RBP14.47□□□□□ -0.09
SNX25-205ENST00000512853 PTMSP20962 102 aa14.47□□□□□ -0.09
SNX25-205ENST00000512853 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
SNX25-205ENST00000512853 RAB3GAP1Q15042 981 aa14.47□□□□□ -0.09
SNX25-205ENST00000512853 NFE2L2Q16236 605 aa14.47□□□□□ -0.09
SNX25-205ENST00000512853 KIF2CQ99661 725 aa14.47□□□□□ -0.09
SNX25-205ENST00000512853 YEATS2Q9ULM3 1422 aa14.47□□□□□ -0.09
SNX25-205ENST00000512853 DLG5Q8TDM6 1919 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms