RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
YIPF3-216ENST00000512713 ATP7BP35670 1465 aa13.12□□□□□ -0.31
YIPF3-216ENST00000512713 ROCK2O75116 1388 aaKnown RBP13.12□□□□□ -0.31
YIPF3-216ENST00000512713 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
YIPF3-216ENST00000512713 EVC2Q86UK5 1308 aa13.12□□□□□ -0.31
YIPF3-216ENST00000512713 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
YIPF3-216ENST00000512713 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
YIPF3-216ENST00000512713 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
YIPF3-216ENST00000512713 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
YIPF3-216ENST00000512713 SF3B2Q13435 895 aaKnown RBP13.1□□□□□ -0.31
YIPF3-216ENST00000512713 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
YIPF3-216ENST00000512713 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
YIPF3-216ENST00000512713 EVA1CP58658 441 aa13.09□□□□□ -0.31
YIPF3-216ENST00000512713 FAM98CQ17RN3 349 aaKnown RBP13.09□□□□□ -0.31
YIPF3-216ENST00000512713 PPIP5K1Q6PFW1 1433 aa13.09□□□□□ -0.31
YIPF3-216ENST00000512713 KIAA0232Q92628 1395 aa13.08□□□□□ -0.31
YIPF3-216ENST00000512713 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
YIPF3-216ENST00000512713 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
YIPF3-216ENST00000512713 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
YIPF3-216ENST00000512713 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
YIPF3-216ENST00000512713 BRD4O60885 1362 aaPredicted RBP13.07□□□□□ -0.32
YIPF3-216ENST00000512713 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
YIPF3-216ENST00000512713 STRN4Q9NRL3 753 aa13.07□□□□□ -0.32
YIPF3-216ENST00000512713 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
YIPF3-216ENST00000512713 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
YIPF3-216ENST00000512713 GCP02774 474 aa13.06□□□□□ -0.32
YIPF3-216ENST00000512713 NLRP6P59044 892 aa13.06□□□□□ -0.32
YIPF3-216ENST00000512713 ZNF692Q9BU19 519 aaPredicted RBP13.06□□□□□ -0.32
YIPF3-216ENST00000512713 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
YIPF3-216ENST00000512713 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
YIPF3-216ENST00000512713 EP400Q96L91 3159 aa13.04□□□□□ -0.32
YIPF3-216ENST00000512713 USP19O94966 1318 aa13.04□□□□□ -0.32
YIPF3-216ENST00000512713 SRCAPQ6ZRS2 3230 aa13.03□□□□□ -0.32
YIPF3-216ENST00000512713 GLI3P10071 1580 aa13.03□□□□□ -0.32
YIPF3-216ENST00000512713 RGPD8O14715 1765 aaPredicted RBP13.03□□□□□ -0.32
YIPF3-216ENST00000512713 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
YIPF3-216ENST00000512713 SPATA31A1Q5TZJ5 1347 aa13.03□□□□□ -0.32
YIPF3-216ENST00000512713 CPDO75976 1380 aa13.03□□□□□ -0.32
YIPF3-216ENST00000512713 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
YIPF3-216ENST00000512713 USP6P35125 1406 aa13.02□□□□□ -0.33
YIPF3-216ENST00000512713 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.33
YIPF3-216ENST00000512713 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
YIPF3-216ENST00000512713 BAG6P46379 1132 aa13□□□□□ -0.33
YIPF3-216ENST00000512713 LARP1Q6PKG0 1096 aaKnown RBP13□□□□□ -0.33
YIPF3-216ENST00000512713 BARGINQ6ZT62 677 aa13□□□□□ -0.33
YIPF3-216ENST00000512713 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
YIPF3-216ENST00000512713 TCP11L2Q8N4U5 519 aa13□□□□□ -0.33
YIPF3-216ENST00000512713 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
YIPF3-216ENST00000512713 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
YIPF3-216ENST00000512713 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
YIPF3-216ENST00000512713 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
YIPF3-216ENST00000512713 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
YIPF3-216ENST00000512713 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
YIPF3-216ENST00000512713 COL14A1Q05707 1796 aaKnown RBP12.99□□□□□ -0.33
YIPF3-216ENST00000512713 SBNO2Q9Y2G9 1366 aa12.98□□□□□ -0.33
YIPF3-216ENST00000512713 TTC21BQ7Z4L5 1316 aa12.98□□□□□ -0.33
YIPF3-216ENST00000512713 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
YIPF3-216ENST00000512713 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
YIPF3-216ENST00000512713 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
YIPF3-216ENST00000512713 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
YIPF3-216ENST00000512713 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
YIPF3-216ENST00000512713 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
YIPF3-216ENST00000512713 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
YIPF3-216ENST00000512713 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
YIPF3-216ENST00000512713 ITSN1Q15811 1721 aa12.97□□□□□ -0.33
YIPF3-216ENST00000512713 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
YIPF3-216ENST00000512713 PLCH1Q4KWH8 1693 aa12.96□□□□□ -0.33
YIPF3-216ENST00000512713 SOX12O15370 315 aa12.96□□□□□ -0.33
YIPF3-216ENST00000512713 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
YIPF3-216ENST00000512713 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
YIPF3-216ENST00000512713 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
YIPF3-216ENST00000512713 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
YIPF3-216ENST00000512713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
YIPF3-216ENST00000512713 ABCA3Q99758 1704 aa12.95□□□□□ -0.34
YIPF3-216ENST00000512713 TOPAZ1Q8N9V7 1692 aa12.95□□□□□ -0.34
YIPF3-216ENST00000512713 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
YIPF3-216ENST00000512713 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
YIPF3-216ENST00000512713 CPSF1Q10570 1443 aaKnown RBP12.94□□□□□ -0.34
YIPF3-216ENST00000512713 QRICH2Q9H0J4 1663 aa12.93□□□□□ -0.34
YIPF3-216ENST00000512713 CAMTA1Q9Y6Y1 1673 aa12.93□□□□□ -0.34
YIPF3-216ENST00000512713 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
YIPF3-216ENST00000512713 TRIM37O94972 964 aa12.93□□□□□ -0.34
YIPF3-216ENST00000512713 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
YIPF3-216ENST00000512713 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
YIPF3-216ENST00000512713 APBA3O96018 575 aa12.92□□□□□ -0.34
YIPF3-216ENST00000512713 CRB1P82279 1406 aa12.92□□□□□ -0.34
YIPF3-216ENST00000512713 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
YIPF3-216ENST00000512713 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
YIPF3-216ENST00000512713 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
YIPF3-216ENST00000512713 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
YIPF3-216ENST00000512713 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
YIPF3-216ENST00000512713 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
YIPF3-216ENST00000512713 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
YIPF3-216ENST00000512713 DDB1Q16531 1140 aa12.9□□□□□ -0.34
YIPF3-216ENST00000512713 NME9Q86XW9 330 aa12.9□□□□□ -0.34
YIPF3-216ENST00000512713 TESK2Q96S53 571 aa12.9□□□□□ -0.34
YIPF3-216ENST00000512713 NRAPQ86VF7 1730 aa12.9□□□□□ -0.34
YIPF3-216ENST00000512713 SLIT3O75094 1523 aa12.89□□□□□ -0.35
YIPF3-216ENST00000512713 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
YIPF3-216ENST00000512713 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms